Factsheet for Bra039108.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37512	Canola	nucleus	97.56	99.5
Bra001005.1-P	Field mustard	nucleus	81.95	80.77
AT3G01530.1	Thale cress	nucleus	75.12	74.76
GSMUA_Achr1P27270_001	Banana	nucleus	45.85	47.96
GSMUA_Achr6P27290_001	Banana	nucleus	42.93	45.13
Bra025300.1-P	Field mustard	nucleus	48.29	42.67
Bra039067.1-P	Field mustard	nucleus	48.29	42.67
TraesCS1D01G415000.1	Wheat	nucleus	45.37	40.79
TraesCS1A01G406600.1	Wheat	mitochondrion	45.85	37.75
HORVU3Hr1G056980.1	Barley	nucleus	37.56	36.32
TraesCS3A01G229500.1	Wheat	nucleus	37.07	36.19
TraesCS3D01G223700.1	Wheat	nucleus	37.07	35.51
TraesCS3B01G258800.1	Wheat	nucleus	36.59	35.21
TraesCS1B01G436800.1	Wheat	nucleus	32.2	34.92
HORVU1Hr1G089770.2	Barley	nucleus	45.85	32.08
Bra004473.1-P	Field mustard	nucleus	42.93	32.0
Bra021389.1-P	Field mustard	nucleus	41.46	31.25
Zm00001d044107_P001	Maize	nucleus	40.0	31.06
Bra020289.1-P	Field mustard	nucleus	35.61	30.93
Bra004041.1-P	Field mustard	nucleus	42.44	30.85
Bra012482.1-P	Field mustard	nucleus	42.44	30.63
Bra001202.1-P	Field mustard	nucleus	45.37	30.59
Os01t0637800-00	Rice	mitochondrion, nucleus, plastid	40.98	30.22
Bra033948.1-P	Field mustard	nucleus	41.95	30.18
Bra004297.1-P	Field mustard	nucleus	41.46	29.93
Bra020624.1-P	Field mustard	nucleus	46.34	29.87
Bra010021.1-P	Field mustard	nucleus	46.83	29.72
Bra010022.1-P	Field mustard	nucleus	46.83	29.72
Bra002533.1-P	Field mustard	nucleus	34.15	29.54
Bra029582.1-P	Field mustard	nucleus	46.34	29.5
Bra006694.1-P	Field mustard	nucleus	34.63	29.34
Bra018223.1-P	Field mustard	nucleus	35.61	28.97
Bra024760.1-P	Field mustard	nucleus	37.56	28.95
EES01143	Sorghum	nucleus	40.98	28.67
Bra040274.1-P	Field mustard	nucleus	44.39	28.44
Bra015029.1-P	Field mustard	nucleus	36.59	27.68
Bra001941.1-P	Field mustard	nucleus	36.59	27.37
Bra020744.1-P	Field mustard	nucleus	34.15	27.24
Bra028550.1-P	Field mustard	nucleus	31.71	27.08
Bra028369.1-P	Field mustard	nucleus	36.1	27.01
Bra025410.1-P	Field mustard	nucleus	35.12	26.87
Bra006977.1-P	Field mustard	nucleus	31.22	26.12
Bra036202.1-P	Field mustard	nucleus	33.66	25.84
GSMUA_Achr9P07000_001	Banana	nucleus	43.41	7.08

Protein Annotations

EnsemblPlants:Bra039108.1	EnsemblPlants:Bra039108.1-P	EnsemblPlantsGene:Bra039108	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF688	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI0002547868	UniProt:M4FDD7	MapMan:15.5.2.1	:	:

Description

AT3G01530 (E=1e-079) AtMYB57 | AtMYB57 (myb domain protein 57); DNA binding / transcription factor

Coordinates

chrA05:-:23916047..23919597

Molecular Weight (calculated)

23602.0 Da

IEP (calculated)

9.843

GRAVY (calculated)

-0.776

Length

205 amino acids

Sequence
(BLAST)

001: MDTKKTGIKK ERIPSQKEEE GTVRKGPWTM EEDLILFNYI LNHGEGLWNS VAKASGLKRT EKSCRLRWLN YLRPDVRRGN ITAEEHLLII QLHAKLGNRW
101: SKIAKYLPGR TDNEIKNFWR TKIQRHVKMS SSKNTNNIRH CLGNSQSSVI TATDQGSSSK GLISPATTTT SFHVMEQSND SYWNVEDIWP LQLLNDDLND
201: DHQVI

Best Arabidopsis Sequence Match ( AT3G01530.1 )
(BLAST)

001: METTMKKKGR VKATITSQKE EEGTVRKGPW TMEEDFILFN YILNHGEGLW NSVAKASGLK RTGKSCRLRW LNYLRPDVRR GNITEEEQLL IIQLHAKLGN
101: RWSKIAKHLP GRTDNEIKNF WRTKIQRHMK VSSENMMNHQ HHCSGNSQSS GMTTQGSSGK AIDTAESFSQ AKTTTFNVVE QQSNENYWNV EDLWPVHLLN
201: GDHHVI

Arabidopsis Description

MYB57Transcription factor MYB57 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSA1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.