Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY58599 | Canola | nucleus | 34.51 | 92.45 |
| Bra024760.1-P | Field mustard | nucleus | 79.23 | 84.59 |
| GSMUA_Achr3P01370_001 | Banana | nucleus | 33.45 | 76.61 |
| AT1G25340.3 | Thale cress | nucleus | 75.35 | 69.48 |
| Bra004041.1-P | Field mustard | nucleus | 61.27 | 61.7 |
| Bra004297.1-P | Field mustard | nucleus | 60.21 | 60.21 |
| GSMUA_Achr10P... | Banana | nucleus | 36.27 | 58.86 |
| Bra033948.1-P | Field mustard | nucleus | 58.1 | 57.89 |
| GSMUA_Achr1P21020_001 | Banana | nucleus | 36.62 | 53.33 |
| GSMUA_Achr8P18460_001 | Banana | nucleus | 39.79 | 45.38 |
| Solyc03g119370.1.1 | Tomato | nucleus | 44.01 | 44.64 |
| PGSC0003DMT400014383 | Potato | nucleus | 42.96 | 43.88 |
| VIT_01s0011g03730.t01 | Wine grape | nucleus | 44.01 | 43.4 |
| Bra039108.1-P | Field mustard | nucleus | 30.63 | 42.44 |
| Bra025300.1-P | Field mustard | nucleus | 34.51 | 42.24 |
| Bra039067.1-P | Field mustard | nucleus | 34.15 | 41.81 |
| KRG90844 | Soybean | nucleus | 45.07 | 41.69 |
| Bra001005.1-P | Field mustard | nucleus | 29.93 | 40.87 |
| KRH35934 | Soybean | nucleus | 44.01 | 40.58 |
| GSMUA_Achr2P22640_001 | Banana | nucleus | 40.49 | 39.38 |
| GSMUA_Achr3P21060_001 | Banana | nucleus | 41.55 | 38.94 |
| Bra021389.1-P | Field mustard | nucleus | 36.62 | 38.24 |
| Bra004473.1-P | Field mustard | nucleus | 36.27 | 37.45 |
| GSMUA_Achr6P09760_001 | Banana | nucleus | 40.14 | 37.01 |
| GSMUA_Achr11P... | Banana | nucleus | 40.85 | 36.83 |
| Bra001202.1-P | Field mustard | nucleus | 38.03 | 35.53 |
| Bra020289.1-P | Field mustard | nucleus | 29.23 | 35.17 |
| Bra002533.1-P | Field mustard | nucleus | 29.23 | 35.02 |
| HORVU3Hr1G004050.1 | Barley | nucleus | 42.25 | 34.19 |
| TraesCS3D01G036200.1 | Wheat | nucleus | 41.2 | 34.01 |
| Os01t0128000-01 | Rice | nucleus | 41.9 | 34.0 |
| Bra006694.1-P | Field mustard | nucleus | 28.87 | 33.88 |
| TraesCS3A01G044700.1 | Wheat | nucleus | 41.2 | 33.81 |
| Bra018223.1-P | Field mustard | nucleus | 29.93 | 33.73 |
| Bra020624.1-P | Field mustard | nucleus | 37.68 | 33.65 |
| TraesCS3B01G039100.1 | Wheat | nucleus | 41.55 | 33.62 |
| Bra040274.1-P | Field mustard | nucleus | 37.68 | 33.44 |
| Zm00001d040019_P001 | Maize | nucleus | 42.61 | 33.43 |
| Bra029582.1-P | Field mustard | nucleus | 37.68 | 33.23 |
| Zm00001d008528_P001 | Maize | nucleus | 42.25 | 33.15 |
| Bra010022.1-P | Field mustard | nucleus | 37.68 | 33.13 |
| Bra010021.1-P | Field mustard | nucleus | 37.68 | 33.13 |
| Bra015029.1-P | Field mustard | nucleus | 30.99 | 32.47 |
| Bra028369.1-P | Field mustard | nucleus | 30.28 | 31.39 |
| Bra001941.1-P | Field mustard | nucleus | 30.28 | 31.39 |
| EES00381 | Sorghum | nucleus | 42.61 | 31.11 |
| Bra020744.1-P | Field mustard | nucleus | 26.76 | 29.57 |
| Bra036202.1-P | Field mustard | nucleus | 27.46 | 29.21 |
| Bra028550.1-P | Field mustard | nucleus | 24.65 | 29.17 |
| Bra025410.1-P | Field mustard | nucleus | 27.46 | 29.1 |
| Bra006977.1-P | Field mustard | nucleus | 24.65 | 28.57 |
Protein Annotations
| EnsemblPlants:Bra012482.1 | EnsemblPlants:Bra012482.1-P | EnsemblPlantsGene:Bra012482 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF510 | PFAM:PF00249 | PFscan:PS51294 | SMART:SM00717 | SUPFAM:SSF46689 |
| UniParc:UPI0002541249 | UniProt:M4D7M2 | MapMan:15.5.2.1 | : | : | : |
Description
AT1G25340 (E=3e-125) MYB116, AtMYB116 | MYB116 (myb domain protein 116); DNA binding / transcription factor
Coordinates
chrA07:-:7286609..7287959
Molecular Weight (calculated)
33022.7 Da
IEP (calculated)
5.922
GRAVY (calculated)
-0.848
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNIMKKRCN ENEESAEQRK GPWTLEEDTL LTNYIAHNGE GRWNLLAKSS GLKRKGKSCR LRWLNYLKPD IKRGNLTPQE QLLILELHCK WGNRWSKIAQ
101: YLPGRTDNEI KNYWRTRVQK QARQLNIDSS SHQFLEVVRS FWVPRLIHKM KDYSNTNSKA PPTDSLGPVV QDNNFSHNSG LNNIDCSTSM SQDLAKISQL
201: MDLSDLETTN SMCLEGSRGS SNQYVNEDHR CLEEEYIVTT MGNSDILPLQ DCHVAYSTYE EDVTQDPMWN MDDIWQFEEY APFN
101: YLPGRTDNEI KNYWRTRVQK QARQLNIDSS SHQFLEVVRS FWVPRLIHKM KDYSNTNSKA PPTDSLGPVV QDNNFSHNSG LNNIDCSTSM SQDLAKISQL
201: MDLSDLETTN SMCLEGSRGS SNQYVNEDHR CLEEEYIVTT MGNSDILPLQ DCHVAYSTYE EDVTQDPMWN MDDIWQFEEY APFN
001: MSNITKKKCN GNEEGAEQRK GPWTLEEDTL LTNYISHNGE GRWNLLAKSS GLKRAGKSCR LRWLNYLKPD IKRGNLTPQE QLLILELHSK WGNRWSKISK
101: YLPGRTDNDI KNYWRTRVQK QARQLNIDSN SHKFIEVVRS FWFPRLINEI KDNSYTNNIK ANAPDLLGPI LRDSKDLGFN NMDCSTSMSE DLKKTSQFMD
201: FSDLETTMSL EGSRGGSSQC VSEVYSSFPC LEEEYMVAVM GSSDISALHD CHVADSKYED DVTQDLMWNM DDIWQFNEYA HFN
101: YLPGRTDNDI KNYWRTRVQK QARQLNIDSN SHKFIEVVRS FWFPRLINEI KDNSYTNNIK ANAPDLLGPI LRDSKDLGFN NMDCSTSMSE DLKKTSQFMD
201: FSDLETTMSL EGSRGGSSQC VSEVYSSFPC LEEEYMVAVM GSSDISALHD CHVADSKYED DVTQDLMWNM DDIWQFNEYA HFN
Arabidopsis Description
MYB116myb domain protein 116 [Source:TAIR;Acc:AT1G25340]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.