Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G036200.1 | Wheat | nucleus | 96.24 | 96.8 |
| TraesCS3B01G039100.1 | Wheat | nucleus | 96.24 | 94.87 |
| HORVU3Hr1G004050.1 | Barley | nucleus | 93.35 | 92.02 |
| GSMUA_Achr3P01370_001 | Banana | nucleus | 30.35 | 84.68 |
| GSMUA_Achr10P... | Banana | nucleus | 34.1 | 67.43 |
| CDY58599 | Canola | nucleus | 20.23 | 66.04 |
| Os01t0128000-01 | Rice | nucleus | 65.32 | 64.57 |
| GSMUA_Achr1P21020_001 | Banana | nucleus | 34.1 | 60.51 |
| Zm00001d008528_P001 | Maize | nucleus | 61.85 | 59.12 |
| Zm00001d040019_P001 | Maize | nucleus | 60.4 | 57.73 |
| EES00381 | Sorghum | nucleus | 61.85 | 55.01 |
| GSMUA_Achr8P18460_001 | Banana | nucleus | 39.02 | 54.22 |
| GSMUA_Achr11P... | Banana | nucleus | 43.35 | 47.62 |
| GSMUA_Achr6P09760_001 | Banana | nucleus | 42.2 | 47.4 |
| GSMUA_Achr2P22640_001 | Banana | nucleus | 39.31 | 46.58 |
| GSMUA_Achr3P21060_001 | Banana | nucleus | 40.17 | 45.87 |
| Solyc05g009230.1.1 | Tomato | nucleus | 34.97 | 44.16 |
| PGSC0003DMT400037716 | Potato | nucleus | 34.68 | 43.96 |
| CDY01906 | Canola | nucleus | 35.55 | 43.16 |
| CDX96033 | Canola | nucleus | 35.26 | 42.96 |
| Bra004297.1-P | Field mustard | nucleus | 35.26 | 42.96 |
| AT1G68320.1 | Thale cress | nucleus | 35.26 | 42.66 |
| CDY69488 | Canola | nucleus | 33.81 | 42.24 |
| CDY69953 | Canola | nucleus | 33.81 | 41.49 |
| CDY54094 | Canola | nucleus | 34.1 | 41.4 |
| CDY12705 | Canola | nucleus | 34.1 | 41.4 |
| Bra033948.1-P | Field mustard | nucleus | 34.1 | 41.4 |
| Bra012482.1-P | Field mustard | nucleus | 33.81 | 41.2 |
| Bra004041.1-P | Field mustard | nucleus | 33.53 | 41.13 |
| TraesCS5A01G087100.1 | Wheat | nucleus | 32.66 | 40.65 |
| TraesCS4A01G172200.1 | Wheat | nucleus | 33.81 | 40.48 |
| PGSC0003DMT400014383 | Potato | nucleus | 32.37 | 40.29 |
| CDY03859 | Canola | nucleus | 33.24 | 40.07 |
| Solyc03g119370.1.1 | Tomato | nucleus | 32.37 | 40.0 |
| CDY42115 | Canola | nucleus | 31.79 | 39.71 |
| TraesCS3A01G229500.1 | Wheat | nucleus | 23.99 | 39.52 |
| KRH60346 | Soybean | nucleus | 36.13 | 39.43 |
| KRH41648 | Soybean | nucleus | 35.55 | 39.42 |
| CDX84981 | Canola | nucleus | 32.66 | 39.24 |
| VIT_17s0000g03560.t01 | Wine grape | nucleus | 36.99 | 39.02 |
| Bra024760.1-P | Field mustard | nucleus | 29.19 | 37.97 |
| KRH39173 | Soybean | nucleus | 32.95 | 36.77 |
| TraesCS4A01G124900.1 | Wheat | nucleus | 33.81 | 36.68 |
| KRH48497 | Soybean | nucleus | 32.66 | 36.33 |
| TraesCS1A01G076200.1 | Wheat | nucleus | 33.53 | 35.8 |
| TraesCS3A01G418100.1 | Wheat | nucleus | 31.5 | 35.39 |
| AT1G25340.3 | Thale cress | nucleus | 31.21 | 35.06 |
| TraesCS1A01G406600.1 | Wheat | mitochondrion | 25.14 | 34.94 |
| TraesCS2A01G097200.1 | Wheat | nucleus | 32.66 | 34.66 |
| TraesCS5A01G083100.1 | Wheat | nucleus | 23.12 | 33.76 |
| TraesCS5A01G512700.1 | Wheat | nucleus | 23.41 | 32.66 |
| TraesCS4A01G173300.2 | Wheat | nucleus | 21.68 | 31.51 |
| TraesCS6A01G227700.1 | Wheat | nucleus | 24.28 | 30.66 |
| TraesCS2A01G363800.1 | Wheat | nucleus | 22.54 | 30.0 |
| TraesCS1A01G042700.1 | Wheat | nucleus | 22.25 | 29.28 |
| TraesCS3A01G535100.1 | Wheat | nucleus | 21.39 | 28.46 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF510 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS3A01G044700 | EnsemblPlants:TraesCS3A01G044700.1 |
| TIGR:cd00167 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3A:+:24037088..24038485
Molecular Weight (calculated)
37139.9 Da
IEP (calculated)
5.863
GRAVY (calculated)
-0.382
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRRKGAAAA GGGGAGPMEM AAMEEEAAEL RRGPWTLEED NLLMSYIACH GEGRWNLLAR CSGLKRTGKS CRLRWLNYLK PDIKRGNLTA EEQLVILELH
101: AKWGNRWSRI AQHLPGRTDN EIKNYWRTRV QKQARQLKVD ANSAVFRDAV RCYWMPRLLD KMSMAAASTA APPPLMEQHG HGVVTSSQSA AIGSDQLCCY
201: PPAGFDPSPS ASTSGSTAAA ALQPAPVPCF SELNWEDQYC YPSGGDLDGG AGGMELDSAA LLGSLGLDGL DLGPAESYLP DATLLDYLNY SSCTANAMNM
301: MVMNGGNYNN SYCGGDAMVD GDHHDPTTAT TCHAARKLAG EWGGGI
101: AKWGNRWSRI AQHLPGRTDN EIKNYWRTRV QKQARQLKVD ANSAVFRDAV RCYWMPRLLD KMSMAAASTA APPPLMEQHG HGVVTSSQSA AIGSDQLCCY
201: PPAGFDPSPS ASTSGSTAAA ALQPAPVPCF SELNWEDQYC YPSGGDLDGG AGGMELDSAA LLGSLGLDGL DLGPAESYLP DATLLDYLNY SSCTANAMNM
301: MVMNGGNYNN SYCGGDAMVD GDHHDPTTAT TCHAARKLAG EWGGGI
001: MENSMKKKKS FKESEDEELR RGPWTLEEDT LLTNYILHNG EGRWNHVAKC AGLKRTGKSC RLRWLNYLKP DIRRGNLTPQ EQLLILELHS KWGNRWSKIA
101: QYLPGRTDNE IKNYWRTRVQ KQARQLNIES NSDKFFDAVR SFWVPRLIEK MEQNSSTTTT YCCPQNNNNN SLLLPSQSHD SLSMQKDIDY SGFSNIDGSS
201: STSTCMSHLT TVPHFMDQSN TNIIDGSMCF HEGNVQEFGG YVPGMEDYMV NSDISMECHV ADGYSAYEDV TQDPMWNVDD IWQFRE
101: QYLPGRTDNE IKNYWRTRVQ KQARQLNIES NSDKFFDAVR SFWVPRLIEK MEQNSSTTTT YCCPQNNNNN SLLLPSQSHD SLSMQKDIDY SGFSNIDGSS
201: STSTCMSHLT TVPHFMDQSN TNIIDGSMCF HEGNVQEFGG YVPGMEDYMV NSDISMECHV ADGYSAYEDV TQDPMWNVDD IWQFRE
Arabidopsis Description
MYB62Transcription factor MYB62 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9G7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.