Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G344000.1 | Wheat | nucleus | 95.97 | 96.75 |
| TraesCS4D01G339100.1 | Wheat | nucleus | 94.76 | 95.14 |
| HORVU4Hr1G084360.3 | Barley | nucleus | 87.9 | 81.04 |
| Zm00001d048383_P001 | Maize | nucleus | 69.76 | 74.57 |
| EER92876 | Sorghum | nucleus | 74.19 | 72.73 |
| Os03t0142600-00 | Rice | nucleus | 72.18 | 72.47 |
| Zm00001d027623_P001 | Maize | nucleus | 70.97 | 70.68 |
| KRH62917 | Soybean | nucleus | 27.42 | 65.38 |
| KRH55348 | Soybean | nucleus | 31.85 | 63.71 |
| KRH11843 | Soybean | nucleus | 31.45 | 62.9 |
| KRH33348 | Soybean | nucleus | 25.4 | 61.76 |
| KRH75688 | Soybean | nucleus | 25.81 | 59.26 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 39.92 | 48.53 |
| GSMUA_Achr11P... | Banana | nucleus | 40.73 | 47.42 |
| GSMUA_Achr11P... | Banana | nucleus | 43.95 | 47.39 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 41.53 | 44.59 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 43.55 | 44.44 |
| KRH04452 | Soybean | nucleus | 47.18 | 44.15 |
| VIT_05s0049g02260.t01 | Wine grape | nucleus | 45.16 | 43.75 |
| KRG90311 | Soybean | nucleus | 45.56 | 43.46 |
| Solyc09g090790.2.1 | Tomato | nucleus | 43.95 | 43.43 |
| PGSC0003DMT400003796 | Potato | nucleus | 43.95 | 43.08 |
| PGSC0003DMT400069955 | Potato | nucleus | 39.11 | 42.36 |
| Solyc05g053150.1.1 | Tomato | nucleus | 38.31 | 41.48 |
| KRH34553 | Soybean | nucleus | 43.95 | 40.98 |
| KRG92245 | Soybean | nucleus | 41.53 | 40.55 |
| CDX77436 | Canola | nucleus | 42.34 | 40.38 |
| TraesCS2A01G363800.1 | Wheat | nucleus | 41.94 | 40.0 |
| CDY61190 | Canola | nucleus | 41.53 | 39.46 |
| TraesCS6A01G227700.1 | Wheat | nucleus | 43.55 | 39.42 |
| AT3G24310.1 | Thale cress | nucleus | 42.74 | 39.41 |
| VIT_14s0083g01060.t01 | Wine grape | nucleus | 39.11 | 39.27 |
| CDY49231 | Canola | nucleus | 42.34 | 39.18 |
| Bra015029.1-P | Field mustard | nucleus | 42.34 | 38.75 |
| AT4G13480.1 | Thale cress | nucleus | 40.73 | 38.7 |
| Bra001941.1-P | Field mustard | nucleus | 41.94 | 37.96 |
| CDX93006 | Canola | nucleus | 41.94 | 37.96 |
| CDX94829 | Canola | nucleus | 41.53 | 37.73 |
| Bra028369.1-P | Field mustard | nucleus | 41.53 | 37.59 |
| CDY64694 | Canola | nucleus | 41.53 | 37.59 |
| Bra020744.1-P | Field mustard | nucleus | 38.71 | 37.35 |
| CDY45895 | Canola | nucleus | 38.71 | 37.35 |
| KRH33568 | Soybean | nucleus | 47.58 | 36.88 |
| Bra025410.1-P | Field mustard | nucleus | 39.11 | 36.19 |
| CDX86354 | Canola | nucleus | 39.11 | 36.19 |
| AT3G30210.1 | Thale cress | nucleus | 39.11 | 35.14 |
| KRH01379 | Soybean | nucleus | 36.29 | 34.88 |
| PGSC0003DMT400003479 | Potato | nucleus | 33.47 | 34.87 |
| CDX85285 | Canola | nucleus | 37.9 | 34.81 |
| KRH01378 | Soybean | nucleus | 39.11 | 34.77 |
| Solyc02g089190.1.1 | Tomato | nucleus | 33.47 | 34.73 |
| KRH45095 | Soybean | nucleus | 37.9 | 34.18 |
| CDY00083 | Canola | nucleus | 36.69 | 33.7 |
| Bra036202.1-P | Field mustard | nucleus | 35.89 | 33.33 |
| CDY19978 | Canola | nucleus | 35.89 | 33.33 |
| TraesCS3A01G229500.1 | Wheat | nucleus | 27.02 | 31.9 |
| TraesCS5A01G083100.1 | Wheat | nucleus | 30.24 | 31.65 |
| TraesCS1A01G042700.1 | Wheat | nucleus | 32.66 | 30.8 |
| TraesCS4A01G173300.2 | Wheat | nucleus | 29.03 | 30.25 |
| TraesCS1A01G406600.1 | Wheat | mitochondrion | 28.63 | 28.51 |
| TraesCS3A01G535100.1 | Wheat | nucleus | 29.44 | 28.08 |
| CDY35782 | Canola | nucleus | 22.58 | 27.32 |
| TraesCS4A01G172200.1 | Wheat | nucleus | 30.65 | 26.3 |
| TraesCS5A01G087100.1 | Wheat | nucleus | 29.03 | 25.9 |
| TraesCS1A01G076200.1 | Wheat | nucleus | 32.66 | 25.0 |
| TraesCS3A01G418100.1 | Wheat | nucleus | 30.65 | 24.68 |
| TraesCS4A01G124900.1 | Wheat | nucleus | 30.24 | 23.51 |
| TraesCS3A01G044700.1 | Wheat | nucleus | 32.66 | 23.41 |
| TraesCS2A01G097200.1 | Wheat | nucleus | 28.63 | 21.78 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF539 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS5A01G512700 |
| EnsemblPlants:TraesCS5A01G512700.1 | TIGR:cd00167 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5A:+:676886891..676887786
Molecular Weight (calculated)
28445.6 Da
IEP (calculated)
6.713
GRAVY (calculated)
-0.807
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMDAMSSAV LQGAWRKGPW TALEDRLLTE YVQQQGEGSW NSVAKLTGLR RSGKSCRLRW VNYLRPDLKR GKITADEETV ILQLHAMLGN RWSAIARCLP
101: GRTDNEIKNY WRTHFKKARP SRRARAQLLH QYQLQQQQQH RQYLHALHLL QQQQQEMQMQ LQENHHQQQQ QQVMMMQQQS PPEEDQAVIT TGDNMNSMET
201: AGCYCPCPAA SAVLDLPLPA DDEDALWDSL WRLVDGEDGS SGGDSGEY
101: GRTDNEIKNY WRTHFKKARP SRRARAQLLH QYQLQQQQQH RQYLHALHLL QQQQQEMQMQ LQENHHQQQQ QQVMMMQQQS PPEEDQAVIT TGDNMNSMET
201: AGCYCPCPAA SAVLDLPLPA DDEDALWDSL WRLVDGEDGS SGGDSGEY
001: METTMKKKGR VKATITSQKE EEGTVRKGPW TMEEDFILFN YILNHGEGLW NSVAKASGLK RTGKSCRLRW LNYLRPDVRR GNITEEEQLL IIQLHAKLGN
101: RWSKIAKHLP GRTDNEIKNF WRTKIQRHMK VSSENMMNHQ HHCSGNSQSS GMTTQGSSGK AIDTAESFSQ AKTTTFNVVE QQSNENYWNV EDLWPVHLLN
201: GDHHVI
101: RWSKIAKHLP GRTDNEIKNF WRTKIQRHMK VSSENMMNHQ HHCSGNSQSS GMTTQGSSGK AIDTAESFSQ AKTTTFNVVE QQSNENYWNV EDLWPVHLLN
201: GDHHVI
Arabidopsis Description
MYB57Transcription factor MYB57 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSA1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.