Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g089190.1.1 | Tomato | nucleus | 86.97 | 86.61 |
| VIT_14s0083g01060.t01 | Wine grape | nucleus | 56.72 | 54.66 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 41.6 | 48.53 |
| GSMUA_Achr11P... | Banana | nucleus | 43.28 | 48.36 |
| PGSC0003DMT400072687 | Potato | nucleus | 27.31 | 47.79 |
| Bra025410.1-P | Field mustard | nucleus | 52.52 | 46.64 |
| CDX86354 | Canola | nucleus | 52.52 | 46.64 |
| CDX85285 | Canola | nucleus | 52.52 | 46.3 |
| Bra036202.1-P | Field mustard | nucleus | 50.84 | 45.32 |
| CDY19978 | Canola | nucleus | 50.84 | 45.32 |
| Bra020744.1-P | Field mustard | nucleus | 48.74 | 45.14 |
| CDY45895 | Canola | nucleus | 48.74 | 45.14 |
| CDY00083 | Canola | nucleus | 50.84 | 44.81 |
| AT3G30210.1 | Thale cress | nucleus | 51.68 | 44.57 |
| PGSC0003DMT400069955 | Potato | nucleus | 42.02 | 43.67 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 42.02 | 43.29 |
| KRH01379 | Soybean | nucleus | 46.64 | 43.02 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 43.7 | 42.8 |
| GSMUA_Achr11P... | Banana | nucleus | 41.18 | 42.61 |
| KRH45095 | Soybean | nucleus | 45.8 | 39.64 |
| HORVU0Hr1G005100.1 | Barley | nucleus | 37.4 | 39.56 |
| PGSC0003DMT400003796 | Potato | nucleus | 41.18 | 38.74 |
| TraesCS2D01G361600.1 | Wheat | nucleus | 41.6 | 38.52 |
| TraesCS2B01G381800.1 | Wheat | nucleus | 41.6 | 38.37 |
| KRH01378 | Soybean | nucleus | 44.96 | 38.35 |
| HORVU2Hr1G087990.1 | Barley | nucleus | 41.6 | 38.22 |
| HORVU6Hr1G057670.3 | Barley | nucleus | 43.28 | 38.15 |
| CDY35782 | Canola | nucleus | 32.77 | 38.05 |
| Zm00001d017243_P001 | Maize | nucleus | 44.54 | 37.72 |
| TraesCS2A01G363800.1 | Wheat | nucleus | 41.18 | 37.69 |
| Zm00001d048383_P001 | Maize | nucleus | 36.55 | 37.5 |
| TraesCS6B01G254200.1 | Wheat | nucleus | 42.86 | 37.23 |
| Zm00001d025823_P001 | Maize | nucleus | 43.28 | 37.05 |
| KXG26684 | Sorghum | nucleus | 43.7 | 36.88 |
| TraesCS6A01G227700.1 | Wheat | nucleus | 42.44 | 36.86 |
| EES07157 | Sorghum | nucleus | 44.54 | 36.81 |
| Os02t0618400-02 | Rice | nucleus | 44.54 | 36.68 |
| Os04t0508500-01 | Rice | nucleus | 43.28 | 36.65 |
| TraesCS6D01G207300.1 | Wheat | nucleus | 42.02 | 36.36 |
| PGSC0003DMT400001278 | Potato | nucleus | 31.09 | 35.75 |
| EER92876 | Sorghum | nucleus | 37.82 | 35.57 |
| Zm00001d027623_P001 | Maize | nucleus | 36.97 | 35.34 |
| Os03t0142600-00 | Rice | nucleus | 36.55 | 35.22 |
| PGSC0003DMT400040149 | Potato | nucleus | 31.93 | 34.86 |
| TraesCS4B01G344000.1 | Wheat | nucleus | 35.71 | 34.55 |
| TraesCS4D01G339100.1 | Wheat | nucleus | 35.71 | 34.41 |
| TraesCS5A01G512700.1 | Wheat | nucleus | 34.87 | 33.47 |
| HORVU4Hr1G084360.3 | Barley | nucleus | 36.97 | 32.71 |
| PGSC0003DMT400011750 | Potato | nucleus | 31.51 | 32.61 |
| PGSC0003DMT400011745 | Potato | nucleus | 31.51 | 32.05 |
| Zm00001d051117_P001 | Maize | nucleus | 36.13 | 30.82 |
| PGSC0003DMT400037716 | Potato | nucleus | 33.19 | 28.94 |
| PGSC0003DMT400011748 | Potato | nucleus | 33.61 | 27.12 |
| PGSC0003DMT400022600 | Potato | nucleus | 33.61 | 26.94 |
| PGSC0003DMT400014383 | Potato | nucleus | 30.67 | 26.26 |
| PGSC0003DMT400069841 | Potato | nucleus | 34.03 | 25.0 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:102598421 | MapMan:15.5.2.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M0ZLR9 | InterPro:Myb_dom | PFAM:PF00249 |
| EnsemblPlantsGene:PGSC0003DMG400001376 | PGSC:PGSC0003DMG400001376 | EnsemblPlants:PGSC0003DMT400003479 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF572 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000296B2B5 | RefSeq:XP_006338764.1 | SEG:seg |
Description
Fgenesh protein 125 [Source:PGSC_GENE;Acc:PGSC0003DMG400001376]
Coordinates
chr2:-:45364428..45365322
Molecular Weight (calculated)
27721.7 Da
IEP (calculated)
7.550
GRAVY (calculated)
-0.805
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRGMMGWGA NSDEQGWRKG PWTPEEDKLL SEYVNLHGEG RWSSVSRCAG LNRTGKSCRL RWVNYLRPGL KRGHITPQEE GIIIELHALW GNKWSTIARY
101: LPGRTDNEIK NYWRTHFKTK VVKQDKKKIM RQMRNHPQQN YTRTDKKIMS SEAEEVIMIK SDDDNMFISS TNNYDEDPVV ELPPVTTSSD TSYTWTETFP
201: MDELWGGLWN IDDEFKVAIQ NQPNCSYAVN LYNGGFIF
101: LPGRTDNEIK NYWRTHFKTK VVKQDKKKIM RQMRNHPQQN YTRTDKKIMS SEAEEVIMIK SDDDNMFISS TNNYDEDPVV ELPPVTTSSD TSYTWTETFP
201: MDELWGGLWN IDDEFKVAIQ NQPNCSYAVN LYNGGFIF
001: MLDWGVQGHH QKHDHDIYQQ QHQQQGCRKG PWTLEEDKLL AEYVTSHGEG RWSTVAKCAG LNRSGKSCRL RWVNYLRPGL KRGQITPQEE GIILELHSLW
101: GNKWSTIARY LPGRTDNEIK NYWRTHYKKN QKSSSKQDKV KKSLSRKQQQ VDLKPQPQAQ SENHQSQLVS QDHMNIDNDH NIASSLYYPT SVFDDKLYMP
201: QSVATTSSDH SMIDEGHLWG SLWNLDEDDP HSFGGGSGQG TAADIDEKFP DSGIEAPSCG SGDYSYTGVY MGGYIF
101: GNKWSTIARY LPGRTDNEIK NYWRTHYKKN QKSSSKQDKV KKSLSRKQQQ VDLKPQPQAQ SENHQSQLVS QDHMNIDNDH NIASSLYYPT SVFDDKLYMP
201: QSVATTSSDH SMIDEGHLWG SLWNLDEDDP HSFGGGSGQG TAADIDEKFP DSGIEAPSCG SGDYSYTGVY MGGYIF
Arabidopsis Description
ATMYB121MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9LRU5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.