Factsheet for Os02t0618400-02

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62917	Soybean	nucleus	27.34	75.96
KRH33348	Soybean	nucleus	26.3	74.51
KRH55348	Soybean	nucleus	31.83	74.19
KRH11843	Soybean	nucleus	31.49	73.39
HORVU6Hr1G057670.3	Barley	nucleus	65.74	70.37
KRH75688	Soybean	nucleus	25.95	69.44
EES07157	Sorghum	nucleus	69.2	69.44
Zm00001d017243_P001	Maize	nucleus	67.47	69.39
TraesCS6B01G254200.1	Wheat	nucleus	65.4	68.98
TraesCS6D01G207300.1	Wheat	nucleus	64.36	67.64
TraesCS6A01G227700.1	Wheat	nucleus	64.01	67.52
GSMUA_Achr11P...	Banana	nucleus	45.67	61.97
Zm00001d051117_P001	Maize	nucleus	59.52	61.65
GSMUA_Achr1P03450_001	Banana	nucleus	50.87	60.49
GSMUA_Achr8P12710_001	Banana	nucleus	47.4	59.31
GSMUA_Achr4P29230_001	Banana	nucleus	41.52	58.82
Os04t0508500-01	Rice	nucleus	56.4	58.01
GSMUA_Achr11P...	Banana	nucleus	45.33	56.96
PGSC0003DMT400069955	Potato	nucleus	40.83	51.53
VIT_05s0049g02260.t01	Wine grape	nucleus	45.33	51.17
KRG90311	Soybean	nucleus	45.33	50.38
KRG92245	Soybean	nucleus	43.94	50.0
Solyc05g053150.1.1	Tomato	nucleus	39.45	49.78
KRH04452	Soybean	nucleus	45.33	49.43
Solyc09g090790.2.1	Tomato	nucleus	42.91	49.4
PGSC0003DMT400003796	Potato	nucleus	42.56	48.62
Os03t0142600-00	Rice	nucleus	41.18	48.18
KRH34553	Soybean	nucleus	43.94	47.74
CDY61190	Canola	nucleus	42.56	47.13
Solyc02g089190.1.1	Tomato	nucleus	38.75	46.86
VIT_14s0083g01060.t01	Wine grape	nucleus	39.45	46.15
CDX77436	Canola	nucleus	41.52	46.15
AT3G24310.1	Thale cress	nucleus	42.91	46.1
CDY49231	Canola	nucleus	42.21	45.52
Bra015029.1-P	Field mustard	nucleus	42.21	45.02
Bra001941.1-P	Field mustard	nucleus	42.56	44.89
Bra028369.1-P	Field mustard	nucleus	42.56	44.89
CDX93006	Canola	nucleus	42.56	44.89
CDX94829	Canola	nucleus	42.21	44.69
PGSC0003DMT400003479	Potato	nucleus	36.68	44.54
CDY64694	Canola	nucleus	41.87	44.16
AT4G13480.1	Thale cress	nucleus	39.1	43.3
KRH01379	Soybean	nucleus	37.72	42.25
Bra025410.1-P	Field mustard	nucleus	38.75	41.79
CDX86354	Canola	nucleus	38.75	41.79
KRH33568	Soybean	nucleus	46.02	41.56
CDX85285	Canola	nucleus	38.75	41.48
CDY45895	Canola	nucleus	36.33	40.86
Bra020744.1-P	Field mustard	nucleus	36.33	40.86
CDY19978	Canola	nucleus	37.72	40.82
Bra036202.1-P	Field mustard	nucleus	37.72	40.82
CDY00083	Canola	nucleus	38.06	40.74
AT3G30210.1	Thale cress	nucleus	38.06	39.86
KRH45095	Soybean	nucleus	37.02	38.91
KRH01378	Soybean	nucleus	36.68	37.99
Os12t0567300-00	Rice	nucleus	28.72	34.3
Os11t0700500-01	Rice	nucleus	27.34	33.33
CDY35782	Canola	nucleus	22.84	32.2
Os01t0975300-01	Rice	vacuole	22.15	30.48
Os11t0684000-01	Rice	nucleus	29.76	30.18
Os07t0688200-01	Rice	nucleus	30.1	29.0
Os01t0298400-01	Rice	extracellular, nucleus	29.07	28.67
Os01t0637800-00	Rice	mitochondrion, nucleus, plastid	27.34	28.42
Os03t0315400-01	Rice	nucleus	30.45	26.75
Os01t0128000-01	Rice	nucleus	30.1	24.86
Os05t0132700-01	Rice	nucleus	13.49	18.14

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:4330001	EMBL:AK111807	ProteinID:BAD21458.1	ProteinID:BAD21600.1
ProteinID:BAF09363.1	ProteinID:BAS79799.1	ncoils:Coil	ProteinID:EAZ23831.1	GO:GO:0000981	GO:GO:0001135
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212
InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	EnsemblPlantsGene:Os02g0618400	EnsemblPlants:Os02t0618400-02	PFAM:PF00249
PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF574	UniProt:Q6K949	InterPro:SANT/Myb	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI0000377BD6	RefSeq:XP_015624171.1	SEG:seg	:	:

Description

MULTIPASSR2R3-type MYB transcription factor, Adaptive growth regulation (Os02t0618400-02)

Coordinates

chr2:-:24580457..24582527

Molecular Weight (calculated)

32084.5 Da

IEP (calculated)

5.224

GRAVY (calculated)

-0.679

Length

289 amino acids

Sequence
(BLAST)

001: MEGQQFAWGR EEGGWRKGPW TAQEDKLLVE YVRQHGEGRW NSVAKITGLK RSGKSCRLRW VNYLRPDLKR GKITPQEESV ILELHALWGN RWSTIARSLP
101: GRTDNEIKNY WRTHFKKGKP SKNIERARAR FLKQRREMQQ QSQLMQTGQQ QQLGQDDDAT SAVVDDNLAE VAPPAATSLT HDGELQIMQE MAPDMDDLLY
201: YHPGDMSPYS YDDLLGSGGG ECGAVAASAG AAASTSEGSS EELDGGAATW GSLWNLDDVV HDMMIDCAAG AGCCWGSFPP LQDKGLAFY

Best Arabidopsis Sequence Match ( AT4G13480.1 )
(BLAST)

001: MVEEVWRKGP WTAEEDRLLI EYVRVHGEGR WNSVSKLAGL KRNGKSCRLR WVNYLRPDLK RGQITPHEES IILELHAKWG NRWSTIARSL PGRTDNEIKN
101: YWRTHFKKKA KPTTNNAEKI KSRLLKRQHF KEQREIELQQ EQQLFQFDQL GMKKIISLLE ENNSSSSSDG GGDVFYYPDQ ITHSSKPFGY NSNSLEEQLQ
201: GRFSPVNIPD ANTMNEDNAI WDGFWNMDVV NGHGGNLGVV AATAACGPRK PYFHNLVIPF C

Arabidopsis Description

AtMYB79Myb domain protein 79 [Source:UniProtKB/TrEMBL;Acc:Q9T0G9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.