Factsheet for Os11t0684000-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G069000.1	Wheat	nucleus	68.77	67.59
HORVU4Hr1G028780.1	Barley	nucleus	69.47	67.58
TraesCS4A01G172200.1	Wheat	nucleus	68.42	67.47
TraesCS4D01G142900.1	Wheat	nucleus	69.12	67.24
TraesCS5A01G087100.1	Wheat	nucleus	58.25	59.71
TraesCS5D01G099100.1	Wheat	nucleus	57.89	59.35
TraesCS5B01G093000.1	Wheat	nucleus	57.89	59.35
HORVU5Hr1G022690.1	Barley	nucleus	57.89	58.51
Zm00001d048647_P001	Maize	nucleus	61.75	50.0
EES10257	Sorghum	nucleus	63.86	49.86
EES17207	Sorghum	nucleus	57.89	48.96
Zm00001d030644_P001	Maize	nucleus	59.65	48.43
Os01t0298400-01	Rice	extracellular, nucleus	46.32	45.05
Os07t0688200-01	Rice	nucleus	45.96	43.67
Os03t0315400-01	Rice	nucleus	47.72	41.34
Os01t0128000-01	Rice	nucleus	40.7	33.14
Os01t0637800-00	Rice	mitochondrion, nucleus, plastid	31.58	32.37
Os05t0132700-01	Rice	nucleus	23.86	31.63
Os12t0567300-00	Rice	nucleus	26.32	30.99
Os02t0618400-02	Rice	nucleus	30.18	29.76
Os11t0700500-01	Rice	nucleus	24.21	29.11
Os03t0142600-00	Rice	nucleus	24.91	28.74
Os04t0508500-01	Rice	nucleus	28.07	28.47
Os01t0975300-01	Rice	vacuole	20.0	27.14

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:4351131	ProteinID:ABA95299.1	EMBL:AY026332	ProteinID:BAF28829.2
ProteinID:BAT15264.1	GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006357	GO:GO:0006950	GO:GO:0006952
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565
GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	EnsemblPlantsGene:Os11g0684000	EnsemblPlants:Os11t0684000-01
PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF548	UniProt:Q2QZJ8	InterPro:SANT/Myb
SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI00000A6A49	RefSeq:XP_015618000.1	SEG:seg	:

Description

JA-regulated myb transcription factorSimilar to Transcription factor MYB21 (Myb-related protein 21) (AtMYB21) (Myb homolog 3) (AtMyb3). (Os11t0684000-01)

Coordinates

chr11:-:27670321..27673334

Molecular Weight (calculated)

32785.2 Da

IEP (calculated)

5.801

GRAVY (calculated)

-0.800

Length

285 amino acids

Sequence
(BLAST)

001: MEMVLQRTSH HPVPGEQQEA AAELSSAELR RGPWTVDEDL TLINYISDHG EGRWNALARA AGLKRTGKSC RLRWLNYLRP DVKRGNFTAE EQLLILDLHS
101: RWGNRWSKIA QHLPGRTDNE IKNYWRTRVQ KHAKQLNCDV NSKRFKDAMK YLWMPRLAER IHARAGAVDD SGDYSNNDLS CVSGVTMATV ANCFDGSPSM
201: VTSSSSDSFT SESQDLKKIN LHVHGDDEKM NSEDWMQEVD HEFWSTEIQP NNEQFQDQQL NGWVQGFSEG LSETLWSLED IWKMQ

Best Arabidopsis Sequence Match ( AT5G49620.1 )
(BLAST)

001: MGDKGRSLKI NKNMEEFTKV EEEMDVRRGP WTVEEDLELI NYIASHGEGR WNSLARCAEL KRTGKSCRLR WLNYLRPDVR RGNITLEEQL LILELHTRWG
101: NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA KQLKCDVNSQ QFKDTMKYLW MPRLVERIQA ASIGSVSMSS CVTTSSDQFV INNNNTNNVD NLALMSNPNG
201: YITPDNSSVA VSPVSDLTEC QVSSEVWKIG QDENLVDPKM TSPNYMDNSS GLLNGDFTKM QDQSDLNWFE NINGMVPNYS DSFWNIGNDE DFWLLQQHQQ
301: VHDNGSF

Arabidopsis Description

AtMYB78myb domain protein 78 [Source:TAIR;Acc:AT5G49620]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.