Factsheet for Os01t0975300-01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

nucleus 6
mitochondrion 4

Predictors

GFP

MS/MS

Papers

vacuole: 15069638

msms PMID: 15069638 doi

N Tanaka, M Fujita, H Handa, S Murayama, M Uemura, Y Kawamura, T Mitsui, S Mikami, Y Tozawa, T Yoshinaga, S Komatsu

Department of Molecular Genetics, National Institute of Agrobiological Sciences, 305-8602, Tsukuba, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P15370_001	Banana	nucleus	37.62	37.8
PGSC0003DMT400040149	Potato	nucleus	35.71	34.4
Solyc11g073120.1.1	Tomato	nucleus	35.24	34.1
GSMUA_Achr10P...	Banana	nucleus	36.67	32.63
GSMUA_Achr5P28350_001	Banana	nucleus	35.71	31.65
Bra020289.1-P	Field mustard	nucleus	35.24	31.36
CDY70097	Canola	nucleus	35.24	31.36
CDY49581	Canola	nucleus	35.24	31.22
Os11t0700500-01	Rice	nucleus	35.24	31.22
Bra002533.1-P	Field mustard	nucleus	35.24	31.22
AT5G59780.3	Thale cress	nucleus	34.76	31.06
TraesCS3D01G540600.1	Wheat	nucleus	37.62	30.86
TraesCS3A01G535100.1	Wheat	nucleus	38.1	30.77
CDX71075	Canola	nucleus	35.24	30.71
GSMUA_Achr7P18200_001	Banana	nucleus	35.24	30.71
TraesCS3B01G612200.2	Wheat	nucleus	38.57	30.68
Os12t0567300-00	Rice	nucleus	35.24	30.58
CDX80230	Canola	nucleus	34.29	30.38
GSMUA_Achr11P...	Banana	nucleus	34.76	30.29
CDX88722	Canola	nucleus	34.29	29.75
Bra006694.1-P	Field mustard	nucleus	34.29	29.75
Solyc06g005330.2.1	Tomato	nucleus	32.86	29.24
Bra018223.1-P	Field mustard	nucleus	34.76	28.97
KRH10298	Soybean	nucleus	34.29	28.24
VIT_06s0004g04140.t01	Wine grape	nucleus	34.29	28.12
AT3G46130.1	Thale cress	nucleus	34.29	27.91
KRH23019	Soybean	nucleus	34.29	27.27
KRH29850	Soybean	nucleus	33.81	26.69
CDX86040	Canola	nucleus	34.76	26.26
CDX86041	Canola	nucleus	34.76	26.26
CDX99125	Canola	nucleus	34.76	26.26
KRH24842	Soybean	nucleus	32.86	25.94
Os03t0142600-00	Rice	nucleus	29.52	25.1
Os04t0508500-01	Rice	nucleus	31.9	23.84
Os02t0618400-02	Rice	nucleus	30.48	22.15
Os01t0298400-01	Rice	extracellular, nucleus	29.05	20.82
Os11t0684000-01	Rice	nucleus	27.14	20.0
Os01t0637800-00	Rice	mitochondrion, nucleus, plastid	26.19	19.78
Os07t0688200-01	Rice	nucleus	26.19	18.33
Os03t0315400-01	Rice	nucleus	27.62	17.63
Os01t0128000-01	Rice	nucleus	28.1	16.86
Os05t0132700-01	Rice	nucleus	14.29	13.95

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EMBL:AK061823	EMBL:AK066180	ProteinID:BAD87845.1	ProteinID:BAS76463.1
GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154
GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017877	InterPro:IPR017930	InterPro:Myb-like_dom
InterPro:Myb_dom	EnsemblPlantsGene:Os01g0975300	EnsemblPlants:Os01t0975300-01	PFAM:PF00249	PFscan:PS50090	PFscan:PS51294
PANTHER:PTHR10641	PANTHER:PTHR10641:SF698	UniProt:Q5JL15	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689
UniParc:UPI00004C2ACB	SEG:seg	:	:	:	:

Description

MYB transcription factor 48MYB-related transcription factor, Drought and salinity tolerance (Os01t0975300-01);Similar to Myb factor protein. (Os01t0975300-02)

Coordinates

chr1:+:43096401..43097949

Molecular Weight (calculated)

24076.8 Da

IEP (calculated)

6.786

GRAVY (calculated)

-0.916

Length

210 amino acids

Sequence
(BLAST)

001: MRAINAGCWI VRRVYGWCVA DAGLQRSGKS CRLRWVNYLH PGLKRGRMSP EEERMVVQLH AKLGNRWSRI AKSIPGRTDN EIKNYWRTHL RKLKLKQQKQ
101: QQSDDHHNDN DDDDDRNSSS SSSSSNSNSN LQQQPQPEDE SSASGSLQAQ HHEDQHQLFL HPLWNDDIIV DVDCWSSSTN VVAPPPMPAS PLWDIDDAFF
201: CSDYSLPLWG

Best Arabidopsis Sequence Match ( AT3G46130.3 )
(BLAST)

001: MDRTGRHTSG LNRTGKSCRL RWVNYLHPGL KRGKMTPQEE RLVLELHAKW GNRWSKIARK LPGRTDNEIK NYWRTHMRKK AQEKKRPVSP TSSFSNCSSS
101: SVTTTTTNTQ DTSCHSRKSS GEVSFYDTGG SRSTREMNQE NEDVYSLDDI WREIDHSAVN IIKPVKDIYS EQSHCLSYPN LASPSWESSL DSIWNMDADK
201: SKISSYFAND QFPFCFQHSR SPWSSG

Arabidopsis Description

ATMYB48myb domain protein 48 [Source:TAIR;Acc:AT3G46130]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.