Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88722 | Canola | nucleus | 95.85 | 95.45 |
| CDY70097 | Canola | nucleus | 90.87 | 92.8 |
| AT5G59780.3 | Thale cress | nucleus | 90.04 | 92.34 |
| CDY49581 | Canola | nucleus | 90.04 | 91.56 |
| CDX80230 | Canola | nucleus | 88.38 | 89.87 |
| CDX86040 | Canola | nucleus | 78.42 | 67.99 |
| CDX86041 | Canola | nucleus | 78.01 | 67.63 |
| CDX99125 | Canola | nucleus | 78.01 | 67.63 |
| GSMUA_Achr6P15370_001 | Banana | nucleus | 49.79 | 57.42 |
| GSMUA_Achr2P16200_001 | Banana | nucleus | 48.55 | 57.07 |
| HORVU5Hr1G021750.2 | Barley | nucleus | 56.02 | 56.96 |
| VIT_06s0004g04140.t01 | Wine grape | nucleus | 59.75 | 56.25 |
| TraesCS5B01G089200.1 | Wheat | nucleus | 55.19 | 56.12 |
| TraesCS4B01G143700.1 | Wheat | nucleus | 55.19 | 55.88 |
| TraesCS4D01G142300.1 | Wheat | nucleus | 55.19 | 55.88 |
| TraesCS5D01G095600.1 | Wheat | nucleus | 54.77 | 55.7 |
| TraesCS4A01G173300.2 | Wheat | nucleus | 54.77 | 55.46 |
| TraesCS5A01G083100.1 | Wheat | nucleus | 54.36 | 55.27 |
| KRH10298 | Soybean | nucleus | 58.09 | 54.9 |
| GSMUA_Achr10P... | Banana | nucleus | 51.04 | 54.42 |
| Solyc11g073120.1.1 | Tomato | nucleus | 48.96 | 54.38 |
| KXG23736 | Sorghum | nucleus | 53.94 | 54.17 |
| PGSC0003DMT400040149 | Potato | nucleus | 48.96 | 54.13 |
| GSMUA_Achr11P... | Banana | nucleus | 53.94 | 53.94 |
| Os11t0700500-01 | Rice | nucleus | 52.7 | 53.59 |
| KRH23019 | Soybean | nucleus | 58.51 | 53.41 |
| GSMUA_Achr10P... | Banana | nucleus | 52.28 | 53.39 |
| Os12t0567300-00 | Rice | nucleus | 53.53 | 53.31 |
| Zm00001d030678_P001 | Maize | nucleus | 53.11 | 52.89 |
| KXG29192 | Sorghum | nucleus | 49.79 | 52.63 |
| Solyc06g005330.2.1 | Tomato | nucleus | 51.45 | 52.54 |
| GSMUA_Achr10P... | Banana | nucleus | 46.06 | 52.36 |
| Zm00001d048623_P002 | Maize | nucleus | 49.38 | 52.19 |
| Zm00001d041576_P001 | Maize | nucleus | 53.94 | 52.0 |
| GSMUA_Achr5P28350_001 | Banana | nucleus | 51.04 | 51.9 |
| GSMUA_Achr9P28370_001 | Banana | nucleus | 46.06 | 51.87 |
| GSMUA_Achr7P18200_001 | Banana | nucleus | 51.45 | 51.45 |
| KRH29850 | Soybean | nucleus | 56.43 | 51.13 |
| KRH24842 | Soybean | nucleus | 56.02 | 50.75 |
| GSMUA_Achr8P34340_001 | Banana | nucleus | 51.45 | 50.61 |
| CDY58599 | Canola | nucleus | 20.75 | 47.17 |
| GSMUA_Achr8P02640_001 | Banana | nucleus | 45.23 | 46.19 |
| TraesCS1D01G043300.1 | Wheat | nucleus | 45.23 | 42.91 |
| TraesCS1B01G055200.1 | Wheat | nucleus | 45.23 | 40.67 |
| HORVU1Hr1G008810.3 | Barley | nucleus | 43.15 | 40.31 |
| TraesCS1A01G042700.1 | Wheat | nucleus | 43.57 | 39.92 |
| TraesCS3D01G540600.1 | Wheat | nucleus | 41.91 | 39.45 |
| TraesCS3A01G535100.1 | Wheat | nucleus | 42.32 | 39.23 |
| TraesCS3B01G612200.2 | Wheat | nucleus | 41.91 | 38.26 |
| CDX85422 | Canola | nucleus | 29.05 | 38.25 |
| CDY37512 | Canola | nucleus | 30.71 | 36.82 |
| CDX78153 | Canola | nucleus | 36.93 | 36.33 |
| CDX86220 | Canola | nucleus | 29.05 | 36.27 |
| CDY00146 | Canola | nucleus | 24.9 | 36.14 |
| CDX91944 | Canola | nucleus | 30.71 | 35.75 |
| KXG29190 | Sorghum | nucleus | 31.12 | 35.38 |
| CDY49063 | Canola | nucleus | 30.29 | 35.27 |
| Os01t0975300-01 | Rice | vacuole | 30.71 | 35.24 |
| CDX73572 | Canola | nucleus | 35.68 | 35.1 |
| CDX74303 | Canola | nucleus | 30.29 | 35.1 |
| CDX67561 | Canola | nucleus | 34.44 | 34.58 |
| OQU77249 | Sorghum | nucleus | 43.57 | 34.09 |
| CDX95420 | Canola | nucleus | 32.37 | 33.62 |
| CDY13311 | Canola | nucleus | 34.02 | 33.61 |
| CDY20036 | Canola | nucleus | 31.12 | 32.33 |
| CDX86471 | Canola | nucleus | 30.71 | 31.9 |
| CDY44433 | Canola | nucleus | 30.71 | 31.9 |
| Zm00001d035605_P001 | Maize | nucleus | 43.15 | 31.8 |
| CDX77436 | Canola | nucleus | 33.61 | 31.15 |
| CDY61190 | Canola | nucleus | 33.61 | 31.03 |
| CDX86354 | Canola | nucleus | 34.02 | 30.6 |
| EES17592 | Sorghum | nucleus | 42.32 | 30.54 |
| CDY27504 | Canola | nucleus | 34.44 | 30.51 |
| CDX85285 | Canola | nucleus | 34.02 | 30.37 |
| CDY45895 | Canola | nucleus | 32.37 | 30.35 |
| CDY49231 | Canola | nucleus | 33.61 | 30.22 |
| CDX80085 | Canola | nucleus | 24.9 | 30.15 |
| CDY00083 | Canola | nucleus | 33.2 | 29.63 |
| CDY19978 | Canola | nucleus | 32.78 | 29.59 |
| CDX93006 | Canola | nucleus | 33.61 | 29.56 |
| CDX94829 | Canola | nucleus | 33.2 | 29.3 |
| CDY64694 | Canola | nucleus | 33.2 | 29.2 |
| CDY03859 | Canola | nucleus | 34.44 | 28.92 |
| CDY42115 | Canola | nucleus | 32.78 | 28.52 |
| CDY69488 | Canola | nucleus | 32.78 | 28.52 |
| CDX84981 | Canola | nucleus | 33.61 | 28.12 |
| CDY69953 | Canola | nucleus | 32.78 | 28.01 |
| Zm00001d035604_P001 | Maize | nucleus | 42.74 | 27.99 |
| CDX96033 | Canola | nucleus | 32.78 | 27.82 |
| CDY01906 | Canola | nucleus | 32.78 | 27.72 |
| CDY12705 | Canola | nucleus | 32.37 | 27.37 |
| CDY54094 | Canola | nucleus | 31.95 | 27.02 |
| CDY05611 | Canola | nucleus | 33.2 | 25.16 |
| CDY33891 | Canola | nucleus | 33.2 | 25.16 |
| CDY24688 | Canola | nucleus | 33.2 | 25.08 |
| CDY05270 | Canola | nucleus | 33.2 | 24.84 |
| CDY70282 | Canola | nucleus | 30.29 | 24.83 |
| CDX99864 | Canola | nucleus | 32.78 | 24.69 |
| CDY34949 | Canola | nucleus | 32.78 | 24.69 |
| CDY35782 | Canola | nucleus | 19.5 | 22.93 |
| CDX74100 | Canola | nucleus | 28.22 | 20.18 |
| CDY58600 | Canola | nucleus | 20.33 | 15.17 |
| CDX86221 | Canola | nucleus | 3.32 | 11.43 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078C2J8 | EnsemblPlants:CDX71075 | ProteinID:CDX71075 | ProteinID:CDX71075.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00141026001 | InterPro:Homeobox-like_sf |
| InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF484 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EE153A | SEG:seg | : |
Description
BnaC03g11590D
Coordinates
chrLK031791:+:3557095..3558027
Molecular Weight (calculated)
28022.9 Da
IEP (calculated)
7.457
GRAVY (calculated)
-0.857
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSVQEEYRK GPWTEQEDIL LVNFVHMFGD RRWDFVAKVS GLNRTGKSCR LRWVNYLHPG LKRGKMTPEE ERLVLELHAK WGNRWSKIAR KLPGRTDNEI
101: KNYWRTHMRK KAQEKKRPMS PTSSSSNCCS SSMTTAATQD TGGSNVKMNQ ECEEDGYYSM DDIWREIDQS GSNIIKPVKD IYYSEQSCYL DFPPLASPAW
201: ESSMESIWNM DADESKMSSF AIDQFPLSFE HDRSSSWSSL L
101: KNYWRTHMRK KAQEKKRPMS PTSSSSNCCS SSMTTAATQD TGGSNVKMNQ ECEEDGYYSM DDIWREIDQS GSNIIKPVKD IYYSEQSCYL DFPPLASPAW
201: ESSMESIWNM DADESKMSSF AIDQFPLSFE HDRSSSWSSL L
001: MKLVQEEYRK GPWTEQEDIL LVNFVHLFGD RRWDFVAKVS GLNRTGKSCR LRWVNYLHPG LKRGKMTPQE ERLVLELHAK WGNRWSKIAR KLPGRTDNEI
101: KNYWRTHMRK KAQEKKRPMS PTSSSSNCCS SSMTTTTSQD TGGSNGKMNQ ECEDGYYSMD DIWREIDQSG ANVIKPVKDN YYSEQSCYLN FPPLASPTWE
201: SSLESIWNMD ADESKMSSFA IDQFPLSFEH GSGRL
101: KNYWRTHMRK KAQEKKRPMS PTSSSSNCCS SSMTTTTSQD TGGSNGKMNQ ECEDGYYSMD DIWREIDQSG ANVIKPVKDN YYSEQSCYLN FPPLASPTWE
201: SSLESIWNMD ADESKMSSFA IDQFPLSFEH GSGRL
Arabidopsis Description
MYB59Transcription factor MYB59 [Source:UniProtKB/Swiss-Prot;Acc:Q4JL84]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.