Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG29192 | Sorghum | nucleus | 39.15 | 36.4 |
| GSMUA_Achr2P16200_001 | Banana | nucleus | 34.91 | 36.1 |
| GSMUA_Achr10P... | Banana | nucleus | 34.43 | 34.43 |
| GSMUA_Achr8P02640_001 | Banana | nucleus | 37.26 | 33.47 |
| KXG23736 | Sorghum | nucleus | 37.74 | 33.33 |
| GSMUA_Achr9P28370_001 | Banana | nucleus | 33.49 | 33.18 |
| PGSC0003DMT400040149 | Potato | nucleus | 33.49 | 32.57 |
| Solyc11g073120.1.1 | Tomato | nucleus | 33.02 | 32.26 |
| AT5G59780.3 | Thale cress | nucleus | 35.38 | 31.91 |
| GSMUA_Achr10P... | Banana | nucleus | 33.49 | 31.42 |
| Bra018223.1-P | Field mustard | nucleus | 37.26 | 31.35 |
| CDX71075 | Canola | nucleus | 35.38 | 31.12 |
| Bra006694.1-P | Field mustard | nucleus | 35.38 | 30.99 |
| CDX88722 | Canola | nucleus | 34.91 | 30.58 |
| Bra002533.1-P | Field mustard | nucleus | 33.96 | 30.38 |
| CDY70097 | Canola | nucleus | 33.49 | 30.08 |
| Bra020289.1-P | Field mustard | nucleus | 33.49 | 30.08 |
| CDY49581 | Canola | nucleus | 33.49 | 29.96 |
| AT3G46130.1 | Thale cress | nucleus | 36.32 | 29.84 |
| KRH10298 | Soybean | nucleus | 35.85 | 29.8 |
| KRH29850 | Soybean | nucleus | 37.26 | 29.7 |
| CDX80230 | Canola | nucleus | 33.02 | 29.54 |
| VIT_06s0004g04140.t01 | Wine grape | nucleus | 35.38 | 29.3 |
| Solyc06g005330.2.1 | Tomato | nucleus | 32.55 | 29.24 |
| KRH23019 | Soybean | nucleus | 36.32 | 29.17 |
| KRH24842 | Soybean | nucleus | 36.32 | 28.95 |
| GSMUA_Achr8P34340_001 | Banana | nucleus | 33.02 | 28.57 |
| CDX86040 | Canola | nucleus | 37.26 | 28.42 |
| CDX86041 | Canola | nucleus | 37.26 | 28.42 |
| CDX99125 | Canola | nucleus | 37.26 | 28.42 |
| OQU77249 | Sorghum | nucleus | 33.49 | 23.05 |
| EES07157 | Sorghum | nucleus | 29.25 | 21.53 |
| EER92876 | Sorghum | nucleus | 25.47 | 21.34 |
| KXG26684 | Sorghum | nucleus | 27.83 | 20.92 |
| EES00624 | Sorghum | nucleus | 28.77 | 19.93 |
| KXG36991 | Sorghum | nucleus | 31.6 | 19.59 |
| EES01143 | Sorghum | nucleus | 26.89 | 19.45 |
| KXG39500 | Sorghum | nucleus | 30.66 | 19.35 |
| EES17592 | Sorghum | nucleus | 30.19 | 19.16 |
| EES17207 | Sorghum | nucleus | 29.72 | 18.69 |
| EES00381 | Sorghum | nucleus | 30.66 | 16.71 |
| EES10257 | Sorghum | nucleus | 27.83 | 16.16 |
| KXG21220 | Sorghum | nucleus | 30.19 | 15.76 |
| KXG21221 | Sorghum | nucleus | 30.66 | 13.63 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | UniProt:A0A1B6PU49 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017877 | InterPro:IPR017930 | EnsemblPlants:KXG29190 | ProteinID:KXG29190 |
| ProteinID:KXG29190.1 | InterPro:Myb-like_dom | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS50090 | PFscan:PS51294 |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF484 | InterPro:SANT/Myb | SMART:SM00717 | EnsemblPlantsGene:SORBI_3005G224700 | SUPFAM:SSF46689 |
| UniParc:UPI00081ACF97 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:-:71150931..71152417
Molecular Weight (calculated)
24089.4 Da
IEP (calculated)
6.500
GRAVY (calculated)
-0.634
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRGGGHATG LNRSGKSCRM RWVNYLHPSR KHGRLSQQEE RLVIELHSRW GNSWSRIARR LPGRTDNDIK NYWKTRMRMK AQERETSMSP SSLTTYTSCL
101: LDSNSPVDVM SCGDTHNNFS SCIIGSALES TRTVDDGFVM DQIWREMETP LQAPALPQVI HQADEKTCSS IVPLCTPATT AAMWDDQCPE VFWNMDAEEI
201: RMLAPQFDCA ES
101: LDSNSPVDVM SCGDTHNNFS SCIIGSALES TRTVDDGFVM DQIWREMETP LQAPALPQVI HQADEKTCSS IVPLCTPATT AAMWDDQCPE VFWNMDAEEI
201: RMLAPQFDCA ES
001: MDRTGRHTSG LNRTGKSCRL RWVNYLHPGL KRGKMTPQEE RLVLELHAKW GNRWSKIARK LPGRTDNEIK NYWRTHMRKK AQEKKRPVSP TSSFSNCSSS
101: SVTTTTTNTQ DTSCHSRKSS GEVSFYDTGG SRSTREMNQE NEDVYSLDDI WREIDHSAVN IIKPVKDIYS EQSHCLSYPN LASPSWESSL DSIWNMDADK
201: SKISSYFAND QFPFCFQHSR SPWSSG
101: SVTTTTTNTQ DTSCHSRKSS GEVSFYDTGG SRSTREMNQE NEDVYSLDDI WREIDHSAVN IIKPVKDIYS EQSHCLSYPN LASPSWESSL DSIWNMDADK
201: SKISSYFAND QFPFCFQHSR SPWSSG
Arabidopsis Description
ATMYB48myb domain protein 48 [Source:TAIR;Acc:AT3G46130]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.