Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d025823_P001 | Maize | nucleus | 86.17 | 87.41 |
| KRH62917 | Soybean | nucleus | 27.66 | 75.0 |
| KRH33348 | Soybean | nucleus | 26.95 | 74.51 |
| KRH55348 | Soybean | nucleus | 32.27 | 73.39 |
| KRH11843 | Soybean | nucleus | 31.91 | 72.58 |
| KRH75688 | Soybean | nucleus | 26.95 | 70.37 |
| Os04t0508500-01 | Rice | nucleus | 67.73 | 67.97 |
| HORVU2Hr1G087990.1 | Barley | nucleus | 62.41 | 67.95 |
| TraesCS2B01G381800.1 | Wheat | nucleus | 61.35 | 67.05 |
| TraesCS2D01G361600.1 | Wheat | nucleus | 60.99 | 66.93 |
| TraesCS2A01G363800.1 | Wheat | nucleus | 61.35 | 66.54 |
| HORVU0Hr1G005100.1 | Barley | nucleus | 52.84 | 66.22 |
| GSMUA_Achr11P... | Banana | nucleus | 44.68 | 59.15 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 46.45 | 56.71 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 40.43 | 55.88 |
| GSMUA_Achr11P... | Banana | nucleus | 45.39 | 55.65 |
| EES07157 | Sorghum | nucleus | 56.74 | 55.56 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 44.33 | 51.44 |
| VIT_05s0049g02260.t01 | Wine grape | nucleus | 45.04 | 49.61 |
| PGSC0003DMT400069955 | Potato | nucleus | 39.72 | 48.91 |
| Solyc05g053150.1.1 | Tomato | nucleus | 39.36 | 48.47 |
| Solyc09g090790.2.1 | Tomato | nucleus | 42.2 | 47.41 |
| KRG90311 | Soybean | nucleus | 43.62 | 47.31 |
| PGSC0003DMT400003796 | Potato | nucleus | 42.2 | 47.04 |
| CDX77436 | Canola | nucleus | 43.26 | 46.92 |
| CDY49231 | Canola | nucleus | 44.33 | 46.64 |
| AT3G24310.1 | Thale cress | nucleus | 44.33 | 46.47 |
| KRG92245 | Soybean | nucleus | 41.84 | 46.46 |
| Bra015029.1-P | Field mustard | nucleus | 44.33 | 46.13 |
| CDY61190 | Canola | nucleus | 42.55 | 45.98 |
| CDX94829 | Canola | nucleus | 44.33 | 45.79 |
| KRH04452 | Soybean | nucleus | 42.91 | 45.66 |
| Bra001941.1-P | Field mustard | nucleus | 44.33 | 45.62 |
| CDX93006 | Canola | nucleus | 44.33 | 45.62 |
| Solyc02g089190.1.1 | Tomato | nucleus | 37.94 | 44.77 |
| KRH34553 | Soybean | nucleus | 42.2 | 44.74 |
| EER92876 | Sorghum | nucleus | 40.07 | 44.66 |
| CDY64694 | Canola | nucleus | 42.91 | 44.16 |
| Bra028369.1-P | Field mustard | nucleus | 42.91 | 44.16 |
| VIT_14s0083g01060.t01 | Wine grape | nucleus | 38.65 | 44.13 |
| PGSC0003DMT400003479 | Potato | nucleus | 36.88 | 43.7 |
| AT4G13480.1 | Thale cress | nucleus | 40.43 | 43.68 |
| Bra025410.1-P | Field mustard | nucleus | 37.94 | 39.93 |
| CDX86354 | Canola | nucleus | 37.94 | 39.93 |
| CDX85285 | Canola | nucleus | 37.94 | 39.63 |
| CDY19978 | Canola | nucleus | 36.52 | 38.58 |
| Bra036202.1-P | Field mustard | nucleus | 36.52 | 38.58 |
| Bra020744.1-P | Field mustard | nucleus | 35.11 | 38.52 |
| CDY45895 | Canola | nucleus | 35.11 | 38.52 |
| CDY00083 | Canola | nucleus | 36.88 | 38.52 |
| AT3G30210.1 | Thale cress | nucleus | 37.59 | 38.41 |
| KRH33568 | Soybean | nucleus | 42.91 | 37.81 |
| KRH01379 | Soybean | nucleus | 34.4 | 37.6 |
| KXG23736 | Sorghum | nucleus | 28.72 | 33.75 |
| KXG29192 | Sorghum | nucleus | 26.95 | 33.33 |
| KRH45095 | Soybean | nucleus | 31.91 | 32.73 |
| KRH01378 | Soybean | nucleus | 31.91 | 32.26 |
| CDY35782 | Canola | nucleus | 21.63 | 29.76 |
| KXG29190 | Sorghum | nucleus | 20.92 | 27.83 |
| OQU77249 | Sorghum | nucleus | 29.08 | 26.62 |
| EES01143 | Sorghum | nucleus | 27.66 | 26.62 |
| KXG39500 | Sorghum | nucleus | 31.21 | 26.19 |
| EES00624 | Sorghum | nucleus | 27.66 | 25.49 |
| EES17592 | Sorghum | nucleus | 29.43 | 24.85 |
| KXG36991 | Sorghum | nucleus | 29.08 | 23.98 |
| EES17207 | Sorghum | nucleus | 26.95 | 22.55 |
| EES10257 | Sorghum | nucleus | 29.08 | 22.47 |
| EES00381 | Sorghum | nucleus | 29.08 | 21.08 |
| KXG21220 | Sorghum | nucleus | 29.08 | 20.2 |
| KXG21221 | Sorghum | nucleus | 29.08 | 17.19 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | UniProt:A0A1B6PLZ5 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | EnsemblPlants:KXG26684 | ProteinID:KXG26684 |
| ProteinID:KXG26684.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF574 |
| InterPro:SANT/Myb | SMART:SM00717 | EnsemblPlantsGene:SORBI_3006G142000 | SUPFAM:SSF46689 | UniParc:UPI00081AD064 | SEG:seg |
Description
hypothetical protein
Coordinates
chr6:-:50394434..50397068
Molecular Weight (calculated)
31009.2 Da
IEP (calculated)
6.500
GRAVY (calculated)
-0.741
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGPLGCWGR QEEVDGWRKG PWTSQEDKLL VDHVRQHGEG RWNSVSKIAG LKRSGKSCRL RWVNYLRPDL KRGKITPQEE SIIVQLHALW GNRWSTIARS
101: LPGRTDNEIK NYWRTHFKKG KPSKNIERAR ARFLKQRQEM MQQQQQQSLI VGQQLNEDGD QRRGTCCTGT GATADDDDRG SATGGDACAA PTTTTVATEA
201: AGDLTTIMHD DDAMDCFIMC PMSCDDLGLV LHGAAAGGQR GGTGSCCGST ASDEYRSSEE DGGATWGSLW NLDGAGEVCT LW
101: LPGRTDNEIK NYWRTHFKKG KPSKNIERAR ARFLKQRQEM MQQQQQQSLI VGQQLNEDGD QRRGTCCTGT GATADDDDRG SATGGDACAA PTTTTVATEA
201: AGDLTTIMHD DDAMDCFIMC PMSCDDLGLV LHGAAAGGQR GGTGSCCGST ASDEYRSSEE DGGATWGSLW NLDGAGEVCT LW
001: MVEEVWRKGP WTAEEDRLLI EYVRVHGEGR WNSVSKLAGL KRNGKSCRLR WVNYLRPDLK RGQITPHEES IILELHAKWG NRWSTIARSL PGRTDNEIKN
101: YWRTHFKKKA KPTTNNAEKI KSRLLKRQHF KEQREIELQQ EQQLFQFDQL GMKKIISLLE ENNSSSSSDG GGDVFYYPDQ ITHSSKPFGY NSNSLEEQLQ
201: GRFSPVNIPD ANTMNEDNAI WDGFWNMDVV NGHGGNLGVV AATAACGPRK PYFHNLVIPF C
101: YWRTHFKKKA KPTTNNAEKI KSRLLKRQHF KEQREIELQQ EQQLFQFDQL GMKKIISLLE ENNSSSSSDG GGDVFYYPDQ ITHSSKPFGY NSNSLEEQLQ
201: GRFSPVNIPD ANTMNEDNAI WDGFWNMDVV NGHGGNLGVV AATAACGPRK PYFHNLVIPF C
Arabidopsis Description
AtMYB79Myb domain protein 79 [Source:UniProtKB/TrEMBL;Acc:Q9T0G9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.