Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45895 | Canola | nucleus | 84.88 | 67.7 |
| CDY00083 | Canola | nucleus | 75.12 | 57.04 |
| CDX85285 | Canola | nucleus | 74.15 | 56.3 |
| CDY19978 | Canola | nucleus | 72.68 | 55.81 |
| CDX86354 | Canola | nucleus | 72.68 | 55.6 |
| AT3G30210.1 | Thale cress | nucleus | 72.2 | 53.62 |
| PGSC0003DMT400003479 | Potato | nucleus | 38.05 | 32.77 |
| VIT_14s0083g01060.t01 | Wine grape | nucleus | 39.02 | 32.39 |
| Solyc02g089190.1.1 | Tomato | nucleus | 36.59 | 31.38 |
| KRH01379 | Soybean | nucleus | 35.61 | 28.29 |
| KRH01378 | Soybean | nucleus | 36.59 | 26.88 |
| GSMUA_Achr11P... | Banana | nucleus | 27.8 | 26.76 |
| KRH45095 | Soybean | nucleus | 35.61 | 26.55 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 26.34 | 26.47 |
| CDX77436 | Canola | nucleus | 32.2 | 25.38 |
| CDY61190 | Canola | nucleus | 32.2 | 25.29 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 29.76 | 25.1 |
| TraesCS2D01G361600.1 | Wheat | nucleus | 31.22 | 24.9 |
| TraesCS2B01G381800.1 | Wheat | nucleus | 31.22 | 24.81 |
| HORVU2Hr1G087990.1 | Barley | nucleus | 31.22 | 24.71 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 27.8 | 24.68 |
| TraesCS2A01G363800.1 | Wheat | nucleus | 31.22 | 24.62 |
| HORVU6Hr1G057670.3 | Barley | nucleus | 32.2 | 24.44 |
| GSMUA_Achr11P... | Banana | nucleus | 27.32 | 24.35 |
| CDY49231 | Canola | nucleus | 31.71 | 24.25 |
| CDY00146 | Canola | nucleus | 19.51 | 24.1 |
| TraesCS6A01G227700.1 | Wheat | nucleus | 31.71 | 23.72 |
| TraesCS6B01G254200.1 | Wheat | nucleus | 31.71 | 23.72 |
| CDY64694 | Canola | nucleus | 31.71 | 23.72 |
| EES07157 | Sorghum | nucleus | 33.17 | 23.61 |
| Os03t0142600-00 | Rice | nucleus | 28.29 | 23.48 |
| TraesCS6D01G207300.1 | Wheat | nucleus | 31.22 | 23.27 |
| Zm00001d017243_P001 | Maize | nucleus | 31.71 | 23.13 |
| HORVU0Hr1G005100.1 | Barley | nucleus | 25.37 | 23.11 |
| CDX93006 | Canola | nucleus | 30.73 | 22.99 |
| Zm00001d048383_P001 | Maize | nucleus | 25.85 | 22.84 |
| Os02t0618400-02 | Rice | nucleus | 32.2 | 22.84 |
| TraesCS4B01G344000.1 | Wheat | nucleus | 27.32 | 22.76 |
| TraesCS5A01G512700.1 | Wheat | nucleus | 27.32 | 22.58 |
| CDX94829 | Canola | nucleus | 29.76 | 22.34 |
| TraesCS4D01G339100.1 | Wheat | nucleus | 26.83 | 22.27 |
| EER92876 | Sorghum | nucleus | 27.32 | 22.13 |
| CDX85422 | Canola | nucleus | 19.51 | 21.86 |
| KXG26684 | Sorghum | nucleus | 29.76 | 21.63 |
| Zm00001d025823_P001 | Maize | nucleus | 29.27 | 21.58 |
| CDX86220 | Canola | nucleus | 20.0 | 21.24 |
| Zm00001d027623_P001 | Maize | nucleus | 25.37 | 20.88 |
| HORVU4Hr1G084360.3 | Barley | nucleus | 27.32 | 20.82 |
| Os04t0508500-01 | Rice | nucleus | 28.29 | 20.64 |
| CDY70097 | Canola | nucleus | 23.41 | 20.34 |
| CDX88722 | Canola | nucleus | 23.9 | 20.25 |
| CDX74303 | Canola | nucleus | 20.0 | 19.71 |
| CDX73572 | Canola | nucleus | 23.41 | 19.59 |
| CDX67561 | Canola | nucleus | 22.93 | 19.58 |
| CDX71075 | Canola | nucleus | 22.93 | 19.5 |
| CDY37512 | Canola | nucleus | 19.02 | 19.4 |
| CDY49063 | Canola | nucleus | 19.51 | 19.32 |
| CDY13311 | Canola | nucleus | 22.93 | 19.26 |
| CDX78153 | Canola | nucleus | 22.93 | 19.18 |
| CDY49581 | Canola | nucleus | 21.95 | 18.99 |
| CDX80230 | Canola | nucleus | 21.95 | 18.99 |
| CDX91944 | Canola | nucleus | 19.02 | 18.84 |
| CDX95420 | Canola | nucleus | 20.0 | 17.67 |
| CDY44433 | Canola | nucleus | 20.0 | 17.67 |
| CDY20036 | Canola | nucleus | 20.0 | 17.67 |
| CDX86471 | Canola | nucleus | 20.0 | 17.67 |
| CDY70282 | Canola | nucleus | 24.88 | 17.35 |
| CDX99125 | Canola | nucleus | 23.41 | 17.27 |
| CDX86041 | Canola | nucleus | 23.41 | 17.27 |
| CDX86040 | Canola | nucleus | 23.41 | 17.27 |
| CDY58599 | Canola | nucleus | 8.78 | 16.98 |
| Zm00001d051117_P001 | Maize | nucleus | 22.93 | 16.85 |
| CDY69488 | Canola | nucleus | 22.44 | 16.61 |
| CDX96033 | Canola | nucleus | 22.93 | 16.55 |
| CDY27504 | Canola | nucleus | 21.95 | 16.54 |
| CDY01906 | Canola | nucleus | 22.93 | 16.49 |
| CDY69953 | Canola | nucleus | 22.44 | 16.31 |
| CDY24688 | Canola | nucleus | 24.88 | 15.99 |
| CDX99864 | Canola | nucleus | 24.88 | 15.94 |
| CDY34949 | Canola | nucleus | 24.88 | 15.94 |
| CDY42115 | Canola | nucleus | 21.46 | 15.88 |
| CDY05270 | Canola | nucleus | 24.88 | 15.84 |
| CDY54094 | Canola | nucleus | 21.95 | 15.79 |
| CDX84981 | Canola | nucleus | 21.95 | 15.62 |
| CDY12705 | Canola | nucleus | 21.46 | 15.44 |
| CDY05611 | Canola | nucleus | 23.9 | 15.41 |
| CDY33891 | Canola | nucleus | 23.9 | 15.41 |
| CDX74100 | Canola | nucleus | 24.88 | 15.13 |
| CDY03859 | Canola | nucleus | 20.98 | 14.98 |
| CDX80085 | Canola | nucleus | 13.17 | 13.57 |
| CDY58600 | Canola | nucleus | 17.07 | 10.84 |
| CDX86221 | Canola | nucleus | 1.95 | 5.71 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078HD76 | UniProt:A0A078HD76 | EnsemblPlants:CDY35782 | ProteinID:CDY35782 |
| ProteinID:CDY35782.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00059242001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF572 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EED31A | SEG:seg |
Description
BnaC02g38120DBnaC02g38120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HD76]
Coordinates
chrLK032360:-:262325..263295
Molecular Weight (calculated)
23815.7 Da
IEP (calculated)
8.229
GRAVY (calculated)
-0.960
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MFCQTIPSAL FNILWLKRGQ ITPQEEGIIL ELHSLWGNKW STIARYLPGR TDNEIKNYWR THYKKKDKSF SKQDKYKRSR KQLGMQPQPQ NQRSQMVSQN
101: HMNHDNEQNI ASSFSYPTSV IHDQFHMPQS VTATSSDHSM IDEGNLWGSL WSLNDEDRPH RFGGGWEQRT AADISEKFNG DRIEAPPCGS GEYNYNGFYT
201: GGYIF
101: HMNHDNEQNI ASSFSYPTSV IHDQFHMPQS VTATSSDHSM IDEGNLWGSL WSLNDEDRPH RFGGGWEQRT AADISEKFNG DRIEAPPCGS GEYNYNGFYT
201: GGYIF
001: MLDWGVQGHH QKHDHDIYQQ QHQQQGCRKG PWTLEEDKLL AEYVTSHGEG RWSTVAKCAG LNRSGKSCRL RWVNYLRPGL KRGQITPQEE GIILELHSLW
101: GNKWSTIARY LPGRTDNEIK NYWRTHYKKN QKSSSKQDKV KKSLSRKQQQ VDLKPQPQAQ SENHQSQLVS QDHMNIDNDH NIASSLYYPT SVFDDKLYMP
201: QSVATTSSDH SMIDEGHLWG SLWNLDEDDP HSFGGGSGQG TAADIDEKFP DSGIEAPSCG SGDYSYTGVY MGGYIF
101: GNKWSTIARY LPGRTDNEIK NYWRTHYKKN QKSSSKQDKV KKSLSRKQQQ VDLKPQPQAQ SENHQSQLVS QDHMNIDNDH NIASSLYYPT SVFDDKLYMP
201: QSVATTSSDH SMIDEGHLWG SLWNLDEDDP HSFGGGSGQG TAADIDEKFP DSGIEAPSCG SGDYSYTGVY MGGYIF
Arabidopsis Description
ATMYB121MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9LRU5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.