Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19978 | Canola | nucleus | 97.04 | 98.13 |
| CDX85285 | Canola | nucleus | 81.48 | 81.48 |
| CDX86354 | Canola | nucleus | 80.0 | 80.6 |
| CDY45895 | Canola | nucleus | 74.44 | 78.21 |
| AT3G30210.1 | Thale cress | nucleus | 77.04 | 75.36 |
| CDY35782 | Canola | nucleus | 57.04 | 75.12 |
| Solyc02g089190.1.1 | Tomato | nucleus | 45.56 | 51.46 |
| PGSC0003DMT400003479 | Potato | nucleus | 44.81 | 50.84 |
| VIT_14s0083g01060.t01 | Wine grape | nucleus | 46.3 | 50.61 |
| CDY58599 | Canola | nucleus | 18.89 | 48.11 |
| KRH01379 | Soybean | nucleus | 43.33 | 45.35 |
| GSMUA_Achr11P... | Banana | nucleus | 35.56 | 45.07 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 33.33 | 44.12 |
| KRH45095 | Soybean | nucleus | 44.44 | 43.64 |
| KRH01378 | Soybean | nucleus | 43.7 | 42.29 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 35.93 | 41.99 |
| CDX77436 | Canola | nucleus | 40.37 | 41.92 |
| GSMUA_Achr11P... | Banana | nucleus | 35.56 | 41.74 |
| CDY61190 | Canola | nucleus | 40.0 | 41.38 |
| TraesCS2D01G361600.1 | Wheat | nucleus | 39.26 | 41.25 |
| TraesCS2B01G381800.1 | Wheat | nucleus | 39.26 | 41.09 |
| CDY49231 | Canola | nucleus | 40.74 | 41.04 |
| HORVU2Hr1G087990.1 | Barley | nucleus | 39.26 | 40.93 |
| HORVU0Hr1G005100.1 | Barley | nucleus | 34.07 | 40.89 |
| TraesCS2A01G363800.1 | Wheat | nucleus | 39.26 | 40.77 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 36.67 | 40.74 |
| Zm00001d048383_P001 | Maize | nucleus | 34.81 | 40.52 |
| HORVU6Hr1G057670.3 | Barley | nucleus | 40.37 | 40.37 |
| TraesCS6B01G254200.1 | Wheat | nucleus | 40.0 | 39.42 |
| CDY64694 | Canola | nucleus | 39.63 | 39.05 |
| CDX93006 | Canola | nucleus | 39.63 | 39.05 |
| TraesCS6A01G227700.1 | Wheat | nucleus | 39.63 | 39.05 |
| Os03t0142600-00 | Rice | nucleus | 35.56 | 38.87 |
| CDX85422 | Canola | nucleus | 26.3 | 38.8 |
| Zm00001d017243_P001 | Maize | nucleus | 40.37 | 38.79 |
| TraesCS6D01G207300.1 | Wheat | nucleus | 39.26 | 38.55 |
| EES07157 | Sorghum | nucleus | 41.11 | 38.54 |
| CDX94829 | Canola | nucleus | 38.89 | 38.46 |
| Os02t0618400-02 | Rice | nucleus | 40.74 | 38.06 |
| Zm00001d025823_P001 | Maize | nucleus | 38.89 | 37.77 |
| Zm00001d027623_P001 | Maize | nucleus | 34.44 | 37.35 |
| CDX86220 | Canola | nucleus | 26.67 | 37.31 |
| TraesCS4D01G339100.1 | Wheat | nucleus | 34.07 | 37.25 |
| EER92876 | Sorghum | nucleus | 34.81 | 37.15 |
| TraesCS4B01G344000.1 | Wheat | nucleus | 33.7 | 36.99 |
| KXG26684 | Sorghum | nucleus | 38.52 | 36.88 |
| TraesCS5A01G512700.1 | Wheat | nucleus | 33.7 | 36.69 |
| Os04t0508500-01 | Rice | nucleus | 37.78 | 36.3 |
| CDY00146 | Canola | nucleus | 21.85 | 35.54 |
| CDY37512 | Canola | nucleus | 25.93 | 34.83 |
| CDX74303 | Canola | nucleus | 26.67 | 34.62 |
| HORVU4Hr1G084360.3 | Barley | nucleus | 34.44 | 34.57 |
| CDY70097 | Canola | nucleus | 30.0 | 34.32 |
| CDY49063 | Canola | nucleus | 26.3 | 34.3 |
| CDX88722 | Canola | nucleus | 30.37 | 33.88 |
| CDX91944 | Canola | nucleus | 25.93 | 33.82 |
| CDY49581 | Canola | nucleus | 29.26 | 33.33 |
| CDX80230 | Canola | nucleus | 29.26 | 33.33 |
| CDX71075 | Canola | nucleus | 29.63 | 33.2 |
| Zm00001d051117_P001 | Maize | nucleus | 33.7 | 32.62 |
| CDX67561 | Canola | nucleus | 28.15 | 31.67 |
| CDY44433 | Canola | nucleus | 27.04 | 31.47 |
| CDX86471 | Canola | nucleus | 27.04 | 31.47 |
| CDY20036 | Canola | nucleus | 27.04 | 31.47 |
| CDX73572 | Canola | nucleus | 28.52 | 31.43 |
| CDX78153 | Canola | nucleus | 28.15 | 31.02 |
| CDY13311 | Canola | nucleus | 27.78 | 30.74 |
| CDX95420 | Canola | nucleus | 26.3 | 30.6 |
| CDX86040 | Canola | nucleus | 29.63 | 28.78 |
| CDX86041 | Canola | nucleus | 29.63 | 28.78 |
| CDX99125 | Canola | nucleus | 29.63 | 28.78 |
| CDY69488 | Canola | nucleus | 29.26 | 28.52 |
| CDY42115 | Canola | nucleus | 29.26 | 28.52 |
| CDY27504 | Canola | nucleus | 28.52 | 28.31 |
| CDY69953 | Canola | nucleus | 29.26 | 28.01 |
| CDY03859 | Canola | nucleus | 29.26 | 27.53 |
| CDX96033 | Canola | nucleus | 28.89 | 27.46 |
| CDX84981 | Canola | nucleus | 29.26 | 27.43 |
| CDY01906 | Canola | nucleus | 28.89 | 27.37 |
| CDY54094 | Canola | nucleus | 27.41 | 25.96 |
| CDY12705 | Canola | nucleus | 27.04 | 25.61 |
| CDX99864 | Canola | nucleus | 29.63 | 25.0 |
| CDY34949 | Canola | nucleus | 29.63 | 25.0 |
| CDY05611 | Canola | nucleus | 29.26 | 24.84 |
| CDY33891 | Canola | nucleus | 29.26 | 24.84 |
| CDY05270 | Canola | nucleus | 29.26 | 24.53 |
| CDY24688 | Canola | nucleus | 28.89 | 24.45 |
| CDX80085 | Canola | nucleus | 17.78 | 24.12 |
| CDY70282 | Canola | nucleus | 23.7 | 21.77 |
| CDX74100 | Canola | nucleus | 22.59 | 18.1 |
| CDY58600 | Canola | nucleus | 16.67 | 13.93 |
| CDX86221 | Canola | nucleus | 1.48 | 5.71 |
Protein Annotations
| EnsemblPlants:CDY00083 | EnsemblPlantsGene:GSBRNA2T00109577001 | Gene3D:1.10.10.60 | GO:A0A078EL54 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF572 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDY00083 | ProteinID:CDY00083.1 |
| SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EE4AE8 | MapMan:15.5.2.1 | : |
Description
BnaC09g02180D
Coordinates
chrLK031916:-:700977..702970
Molecular Weight (calculated)
31255.1 Da
IEP (calculated)
8.549
GRAVY (calculated)
-1.081
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MLYWGVDQVH HPNHDQDPYK QQQQQGCRKG PWTPEEDKLL GEYVSSNGEG RWSTVAKSAG LNRSGKSCRL RWVNYLRPGL KRGQITPQEE GIILELHSLW
101: GNKWSTIARY LPGRTDNEIK NYWRTHYKKK EKSFSKQEKL RRSRKQLDLK TQPQLQNQQS KLVSEDHINL DNKQNIATYF SYPTSVYNDK FHMPQNVAAT
201: SSDHSMIDEG NFWCSLWSLE DDDPHRFGGG SEQRTATSIA EKFNGGGNEA PSCGSWDYSY NEFYSGGYIF
101: GNKWSTIARY LPGRTDNEIK NYWRTHYKKK EKSFSKQEKL RRSRKQLDLK TQPQLQNQQS KLVSEDHINL DNKQNIATYF SYPTSVYNDK FHMPQNVAAT
201: SSDHSMIDEG NFWCSLWSLE DDDPHRFGGG SEQRTATSIA EKFNGGGNEA PSCGSWDYSY NEFYSGGYIF
001: MLDWGVQGHH QKHDHDIYQQ QHQQQGCRKG PWTLEEDKLL AEYVTSHGEG RWSTVAKCAG LNRSGKSCRL RWVNYLRPGL KRGQITPQEE GIILELHSLW
101: GNKWSTIARY LPGRTDNEIK NYWRTHYKKN QKSSSKQDKV KKSLSRKQQQ VDLKPQPQAQ SENHQSQLVS QDHMNIDNDH NIASSLYYPT SVFDDKLYMP
201: QSVATTSSDH SMIDEGHLWG SLWNLDEDDP HSFGGGSGQG TAADIDEKFP DSGIEAPSCG SGDYSYTGVY MGGYIF
101: GNKWSTIARY LPGRTDNEIK NYWRTHYKKN QKSSSKQDKV KKSLSRKQQQ VDLKPQPQAQ SENHQSQLVS QDHMNIDNDH NIASSLYYPT SVFDDKLYMP
201: QSVATTSSDH SMIDEGHLWG SLWNLDEDDP HSFGGGSGQG TAADIDEKFP DSGIEAPSCG SGDYSYTGVY MGGYIF
Arabidopsis Description
ATMYB121MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9LRU5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.