Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY61190 | Canola | nucleus | 92.34 | 96.93 |
| Bra028369.1-P | Field mustard | nucleus | 96.72 | 96.72 |
| CDX77436 | Canola | nucleus | 83.58 | 88.08 |
| CDY49231 | Canola | nucleus | 85.77 | 87.69 |
| AT3G24310.1 | Thale cress | nucleus | 83.21 | 84.76 |
| KRH62917 | Soybean | nucleus | 32.12 | 84.62 |
| CDX93006 | Canola | nucleus | 84.31 | 84.31 |
| CDX94829 | Canola | nucleus | 82.85 | 83.15 |
| KRH55348 | Soybean | nucleus | 37.59 | 83.06 |
| KRH11843 | Soybean | nucleus | 37.23 | 82.26 |
| KRH33348 | Soybean | nucleus | 30.29 | 81.37 |
| KRH75688 | Soybean | nucleus | 30.66 | 77.78 |
| PGSC0003DMT400069955 | Potato | nucleus | 51.46 | 61.57 |
| Solyc05g053150.1.1 | Tomato | nucleus | 49.63 | 59.39 |
| VIT_05s0049g02260.t01 | Wine grape | nucleus | 54.38 | 58.2 |
| KRG90311 | Soybean | nucleus | 55.11 | 58.08 |
| KRH34553 | Soybean | nucleus | 56.2 | 57.89 |
| KRG92245 | Soybean | nucleus | 53.65 | 57.87 |
| KRH04452 | Soybean | nucleus | 55.47 | 57.36 |
| PGSC0003DMT400003796 | Potato | nucleus | 52.55 | 56.92 |
| Solyc09g090790.2.1 | Tomato | nucleus | 50.73 | 55.38 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 38.32 | 51.47 |
| CDY58599 | Canola | nucleus | 19.71 | 50.94 |
| GSMUA_Achr11P... | Banana | nucleus | 39.42 | 50.7 |
| GSMUA_Achr11P... | Banana | nucleus | 40.88 | 48.7 |
| KRH33568 | Soybean | nucleus | 56.57 | 48.44 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 39.78 | 47.19 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 41.61 | 46.91 |
| HORVU0Hr1G005100.1 | Barley | nucleus | 36.5 | 44.44 |
| HORVU6Hr1G057670.3 | Barley | nucleus | 43.07 | 43.7 |
| TraesCS2A01G363800.1 | Wheat | nucleus | 41.24 | 43.46 |
| Zm00001d048383_P001 | Maize | nucleus | 36.5 | 43.1 |
| Zm00001d017243_P001 | Maize | nucleus | 44.16 | 43.06 |
| TraesCS2B01G381800.1 | Wheat | nucleus | 40.51 | 43.02 |
| Os03t0142600-00 | Rice | nucleus | 38.69 | 42.91 |
| KXG26684 | Sorghum | nucleus | 44.16 | 42.91 |
| HORVU2Hr1G087990.1 | Barley | nucleus | 40.51 | 42.86 |
| TraesCS2D01G361600.1 | Wheat | nucleus | 40.15 | 42.8 |
| TraesCS6A01G227700.1 | Wheat | nucleus | 42.7 | 42.7 |
| TraesCS6B01G254200.1 | Wheat | nucleus | 42.7 | 42.7 |
| CDX85422 | Canola | nucleus | 28.47 | 42.62 |
| TraesCS4B01G344000.1 | Wheat | nucleus | 37.96 | 42.28 |
| TraesCS6D01G207300.1 | Wheat | nucleus | 42.34 | 42.18 |
| EES07157 | Sorghum | nucleus | 44.16 | 42.01 |
| Os02t0618400-02 | Rice | nucleus | 44.16 | 41.87 |
| Zm00001d027623_P001 | Maize | nucleus | 37.96 | 41.77 |
| TraesCS4D01G339100.1 | Wheat | nucleus | 37.59 | 41.7 |
| TraesCS5A01G512700.1 | Wheat | nucleus | 37.59 | 41.53 |
| Zm00001d025823_P001 | Maize | nucleus | 41.97 | 41.37 |
| EER92876 | Sorghum | nucleus | 37.96 | 41.11 |
| Os04t0508500-01 | Rice | nucleus | 41.97 | 40.93 |
| CDX86354 | Canola | nucleus | 39.78 | 40.67 |
| CDX86220 | Canola | nucleus | 28.47 | 40.41 |
| CDX85285 | Canola | nucleus | 39.78 | 40.37 |
| CDY19978 | Canola | nucleus | 38.69 | 39.7 |
| CDY00083 | Canola | nucleus | 39.05 | 39.63 |
| CDY00146 | Canola | nucleus | 23.72 | 39.16 |
| HORVU4Hr1G084360.3 | Barley | nucleus | 38.32 | 39.03 |
| CDY45895 | Canola | nucleus | 36.5 | 38.91 |
| CDY37512 | Canola | nucleus | 27.37 | 37.31 |
| CDY49063 | Canola | nucleus | 27.37 | 36.23 |
| Zm00001d051117_P001 | Maize | nucleus | 36.5 | 35.84 |
| CDX91944 | Canola | nucleus | 27.01 | 35.75 |
| CDY20036 | Canola | nucleus | 29.93 | 35.34 |
| CDX74303 | Canola | nucleus | 26.64 | 35.1 |
| CDX86471 | Canola | nucleus | 29.56 | 34.91 |
| CDY44433 | Canola | nucleus | 29.56 | 34.91 |
| CDX88722 | Canola | nucleus | 29.56 | 33.47 |
| CDX71075 | Canola | nucleus | 29.2 | 33.2 |
| CDX95420 | Canola | nucleus | 28.1 | 33.19 |
| CDY70097 | Canola | nucleus | 28.47 | 33.05 |
| CDY13311 | Canola | nucleus | 29.2 | 32.79 |
| CDX78153 | Canola | nucleus | 29.2 | 32.65 |
| CDX67561 | Canola | nucleus | 28.47 | 32.5 |
| CDY49581 | Canola | nucleus | 28.1 | 32.49 |
| CDX73572 | Canola | nucleus | 28.83 | 32.24 |
| CDX80230 | Canola | nucleus | 27.74 | 32.07 |
| CDY35782 | Canola | nucleus | 23.72 | 31.71 |
| CDY69488 | Canola | nucleus | 31.75 | 31.41 |
| CDY69953 | Canola | nucleus | 31.75 | 30.85 |
| CDY27504 | Canola | nucleus | 30.29 | 30.51 |
| CDY03859 | Canola | nucleus | 31.39 | 29.97 |
| CDY42115 | Canola | nucleus | 30.29 | 29.96 |
| CDX96033 | Canola | nucleus | 31.02 | 29.93 |
| CDX84981 | Canola | nucleus | 31.02 | 29.51 |
| CDY01906 | Canola | nucleus | 30.66 | 29.47 |
| CDY12705 | Canola | nucleus | 30.29 | 29.12 |
| CDY54094 | Canola | nucleus | 30.29 | 29.12 |
| CDX86040 | Canola | nucleus | 28.47 | 28.06 |
| CDX86041 | Canola | nucleus | 28.47 | 28.06 |
| CDX99125 | Canola | nucleus | 28.47 | 28.06 |
| CDY05611 | Canola | nucleus | 32.48 | 27.99 |
| CDY33891 | Canola | nucleus | 32.48 | 27.99 |
| CDX80085 | Canola | nucleus | 20.07 | 27.64 |
| CDY24688 | Canola | nucleus | 32.12 | 27.59 |
| CDY05270 | Canola | nucleus | 32.12 | 27.33 |
| CDX99864 | Canola | nucleus | 31.75 | 27.19 |
| CDY34949 | Canola | nucleus | 31.75 | 27.19 |
| CDY70282 | Canola | nucleus | 24.45 | 22.79 |
| CDX74100 | Canola | nucleus | 23.72 | 19.29 |
| CDY58600 | Canola | nucleus | 18.25 | 15.48 |
| CDX86221 | Canola | nucleus | 1.46 | 5.71 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078JDH0 | UniProt:A0A078JDH0 | EnsemblPlants:CDY64694 | ProteinID:CDY64694 |
| ProteinID:CDY64694.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00042562001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF574 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EF3184 | SEG:seg |
Description
BnaCnng44540DBnaCnng44540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JDH0]
Coordinates
chrLK034523:-:10769..11742
Molecular Weight (calculated)
31357.9 Da
IEP (calculated)
9.127
GRAVY (calculated)
-0.787
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLWGVMGAG WGIVEEGWRK GPWTAEEDRL LIDYVRLHGE GRWNSVARLA GLKRNGKSCR LRWVNYLRPD LKRGQITPHE ETIILELHAK WGNRWSTIAR
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNNAE KTKNRIFKRQ QFQQQRQMEY QQEQQLLQLN QIDMKKIMSF LEDENNHNNG DSNFSTSSSG SSGEGGAFYV
201: PHPITHSSTS SGYESNGNGF FPVVSVPLPE ANVHEVYGIW DGLWNLDLEG QGSFNDGACV PRKPCFQNLG VPFC
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNNAE KTKNRIFKRQ QFQQQRQMEY QQEQQLLQLN QIDMKKIMSF LEDENNHNNG DSNFSTSSSG SSGEGGAFYV
201: PHPITHSSTS SGYESNGNGF FPVVSVPLPE ANVHEVYGIW DGLWNLDLEG QGSFNDGACV PRKPCFQNLG VPFC
001: MSLWGGMGGG WGMVEEGWRK GPWTAEEDRL LIDYVQLHGE GRWNSVARLA GLKRNGKSCR LRWVNYLRPD LKRGQITPHE ETIILELHAK WGNRWSTIAR
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNSAE KTKNRILKRQ QFQQQRQMEL QQEQQLLQFN QIDMKKIMSL LDDDNNNGDN TFSSSSSGES GALYVPHQIT
201: HSTTTSGCEP NSNGYYPVVP VTIPEANVNE DNAIWDGLWN LDFEGQGSFG GAACAPRKHY FQNMVIPFC
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNSAE KTKNRILKRQ QFQQQRQMEL QQEQQLLQFN QIDMKKIMSL LDDDNNNGDN TFSSSSSGES GALYVPHQIT
201: HSTTTSGCEP NSNGYYPVVP VTIPEANVNE DNAIWDGLWN LDFEGQGSFG GAACAPRKHY FQNMVIPFC
Arabidopsis Description
MYB305MYB305 [Source:UniProtKB/TrEMBL;Acc:A0A178VHM5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.