Factsheet for Solyc09g090790.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400003796	Potato	nucleus	93.63	92.89
KRH62917	Soybean	nucleus	34.26	82.69
KRH55348	Soybean	nucleus	40.24	81.45
KRH11843	Soybean	nucleus	39.84	80.65
KRH33348	Soybean	nucleus	32.27	79.41
KRH75688	Soybean	nucleus	33.47	77.78
Solyc05g053150.1.1	Tomato	nucleus	58.96	64.63
VIT_05s0049g02260.t01	Wine grape	nucleus	60.56	59.38
KRG92245	Soybean	nucleus	58.17	57.48
KRH34553	Soybean	nucleus	60.16	56.77
Solyc02g086690.2.1	Tomato	nucleus	21.12	56.38
KRG90311	Soybean	nucleus	56.57	54.62
KRH04452	Soybean	nucleus	57.37	54.34
AT3G24310.1	Thale cress	nucleus	56.97	53.16
CDX77436	Canola	nucleus	54.58	52.69
CDY49231	Canola	nucleus	56.18	52.61
GSMUA_Achr11P...	Banana	nucleus	44.62	52.58
CDY61190	Canola	nucleus	54.58	52.49
CDX94829	Canola	nucleus	56.18	51.65
CDX93006	Canola	nucleus	56.18	51.46
Bra001941.1-P	Field mustard	nucleus	56.18	51.46
Bra015029.1-P	Field mustard	nucleus	55.38	51.29
Solyc09g008390.1.1	Tomato	nucleus	26.69	51.15
CDY64694	Canola	nucleus	55.38	50.73
GSMUA_Achr4P29230_001	Banana	nucleus	41.04	50.49
GSMUA_Achr11P...	Banana	nucleus	45.82	50.0
Bra028369.1-P	Field mustard	nucleus	54.58	50.0
GSMUA_Achr8P12710_001	Banana	nucleus	45.02	48.92
AT4G13480.1	Thale cress	nucleus	50.2	48.28
Zm00001d048383_P001	Maize	nucleus	43.03	46.55
GSMUA_Achr1P03450_001	Banana	nucleus	44.62	46.09
KRH33568	Soybean	nucleus	58.17	45.62
Os03t0142600-00	Rice	nucleus	44.22	44.94
HORVU0Hr1G005100.1	Barley	nucleus	40.24	44.89
TraesCS4B01G344000.1	Wheat	nucleus	43.43	44.31
TraesCS4D01G339100.1	Wheat	nucleus	43.43	44.13
Zm00001d017243_P001	Maize	nucleus	49.4	44.13
TraesCS5A01G512700.1	Wheat	nucleus	43.43	43.95
EER92876	Sorghum	nucleus	43.82	43.48
EES07157	Sorghum	nucleus	49.8	43.4
TraesCS2A01G363800.1	Wheat	nucleus	44.62	43.08
TraesCS2B01G381800.1	Wheat	nucleus	44.22	43.02
Zm00001d027623_P001	Maize	nucleus	42.63	42.97
HORVU6Hr1G057670.3	Barley	nucleus	46.22	42.96
Os02t0618400-02	Rice	nucleus	49.4	42.91
TraesCS2D01G361600.1	Wheat	nucleus	43.82	42.8
TraesCS6A01G227700.1	Wheat	nucleus	46.61	42.7
HORVU4Hr1G084360.3	Barley	nucleus	45.42	42.38
TraesCS6B01G254200.1	Wheat	nucleus	46.22	42.34
Solyc02g089190.1.1	Tomato	nucleus	40.24	42.26
KXG26684	Sorghum	nucleus	47.41	42.2
HORVU2Hr1G087990.1	Barley	nucleus	43.43	42.08
TraesCS6D01G207300.1	Wheat	nucleus	45.82	41.82
Os04t0508500-01	Rice	nucleus	46.22	41.28
Zm00001d025823_P001	Maize	nucleus	45.42	41.01
Solyc02g067760.2.1	Tomato	nucleus	30.68	39.49
Solyc11g073120.1.1	Tomato	nucleus	33.07	38.25
Zm00001d051117_P001	Maize	nucleus	39.84	35.84
Solyc06g005330.2.1	Tomato	nucleus	33.07	35.17
Solyc10g083900.1.1	Tomato	nucleus	26.29	33.0
Solyc12g099130.1.1	Tomato	nucleus	30.68	32.77
Solyc05g009230.1.1	Tomato	nucleus	34.66	31.75
Solyc12g099120.1.1	Tomato	nucleus	31.08	31.58
Solyc01g057910.2.1	Tomato	nucleus	33.86	29.62
Solyc03g119370.1.1	Tomato	nucleus	32.27	28.93
Solyc05g053330.2.1	Tomato	nucleus	34.66	27.36
Solyc12g099140.1.1	Tomato	nucleus	32.67	27.33

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930
UniProt:K4CWA5	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF574
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	EnsemblPlantsGene:Solyc09g090790.2	EnsemblPlants:Solyc09g090790.2.1	UniParc:UPI000276AFA6
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr9:-:70204211..70205328

Molecular Weight (calculated)

29776.9 Da

IEP (calculated)

9.667

GRAVY (calculated)

-1.029

Length

251 amino acids

Sequence
(BLAST)

001: MGSNWGFIEE VGWRKGPWTS DEDRLLIEYV KLHGEGRWNS VARLTGLRRN GKSCRLRWVN YLRPDLKRGQ ITPHEERIIL ELHSRWGNRW STIARSLPGR
101: TDNEIKNYWR THFKKKTKNS SDNSEKSRAR LWKKQQFQQQ QQQQQQINNQ IDIKNVMSLP TMPQGKQEMT ILYPNNMIDQ QDQADFFYSS LNNSTSISQS
201: EPSSSNEDIM WDDLWNLDDF YGHFMINTTT YNNKTNTIPC LQQMATTPTF Y

Best Arabidopsis Sequence Match ( AT3G24310.1 )
(BLAST)

001: MSLWGGMGGG WGMVEEGWRK GPWTAEEDRL LIDYVQLHGE GRWNSVARLA GLKRNGKSCR LRWVNYLRPD LKRGQITPHE ETIILELHAK WGNRWSTIAR
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNSAE KTKNRILKRQ QFQQQRQMEL QQEQQLLQFN QIDMKKIMSL LDDDNNNGDN TFSSSSSGES GALYVPHQIT
201: HSTTTSGCEP NSNGYYPVVP VTIPEANVNE DNAIWDGLWN LDFEGQGSFG GAACAPRKHY FQNMVIPFC

Arabidopsis Description

MYB305MYB305 [Source:UniProtKB/TrEMBL;Acc:A0A178VHM5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.