Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G512700.1 | Wheat | nucleus | 96.75 | 95.97 |
| TraesCS4D01G339100.1 | Wheat | nucleus | 94.72 | 94.33 |
| HORVU4Hr1G084360.3 | Barley | nucleus | 89.43 | 81.78 |
| Zm00001d048383_P001 | Maize | nucleus | 70.33 | 74.57 |
| EER92876 | Sorghum | nucleus | 75.2 | 73.12 |
| Os03t0142600-00 | Rice | nucleus | 72.76 | 72.47 |
| Zm00001d027623_P001 | Maize | nucleus | 71.95 | 71.08 |
| KRH62917 | Soybean | nucleus | 27.64 | 65.38 |
| KRH55348 | Soybean | nucleus | 32.11 | 63.71 |
| KRH11843 | Soybean | nucleus | 31.71 | 62.9 |
| KRH33348 | Soybean | nucleus | 25.61 | 61.76 |
| KRH75688 | Soybean | nucleus | 26.02 | 59.26 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 40.65 | 49.02 |
| GSMUA_Achr11P... | Banana | nucleus | 41.87 | 48.36 |
| GSMUA_Achr11P... | Banana | nucleus | 43.5 | 46.52 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 42.68 | 45.45 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 44.31 | 44.86 |
| VIT_05s0049g02260.t01 | Wine grape | nucleus | 46.34 | 44.53 |
| KRH04452 | Soybean | nucleus | 47.97 | 44.53 |
| KRG90311 | Soybean | nucleus | 46.34 | 43.85 |
| Solyc09g090790.2.1 | Tomato | nucleus | 44.31 | 43.43 |
| PGSC0003DMT400003796 | Potato | nucleus | 44.31 | 43.08 |
| PGSC0003DMT400069955 | Potato | nucleus | 39.84 | 42.79 |
| Solyc05g053150.1.1 | Tomato | nucleus | 39.02 | 41.92 |
| KRH34553 | Soybean | nucleus | 45.12 | 41.73 |
| KRG92245 | Soybean | nucleus | 42.68 | 41.34 |
| CDX77436 | Canola | nucleus | 43.09 | 40.77 |
| TraesCS2B01G381800.1 | Wheat | nucleus | 42.28 | 40.31 |
| CDY61190 | Canola | nucleus | 42.28 | 39.85 |
| AT3G24310.1 | Thale cress | nucleus | 43.5 | 39.78 |
| CDY49231 | Canola | nucleus | 43.09 | 39.55 |
| AT4G13480.1 | Thale cress | nucleus | 41.87 | 39.46 |
| TraesCS6B01G254200.1 | Wheat | nucleus | 43.9 | 39.42 |
| Bra015029.1-P | Field mustard | nucleus | 43.09 | 39.11 |
| VIT_14s0083g01060.t01 | Wine grape | nucleus | 38.62 | 38.46 |
| CDX93006 | Canola | nucleus | 42.68 | 38.32 |
| Bra001941.1-P | Field mustard | nucleus | 42.68 | 38.32 |
| CDX94829 | Canola | nucleus | 42.28 | 38.1 |
| Bra028369.1-P | Field mustard | nucleus | 42.28 | 37.96 |
| CDY64694 | Canola | nucleus | 42.28 | 37.96 |
| CDY45895 | Canola | nucleus | 39.02 | 37.35 |
| Bra020744.1-P | Field mustard | nucleus | 39.02 | 37.35 |
| KRH33568 | Soybean | nucleus | 48.37 | 37.19 |
| Bra025410.1-P | Field mustard | nucleus | 39.84 | 36.57 |
| CDX86354 | Canola | nucleus | 39.84 | 36.57 |
| PGSC0003DMT400003479 | Potato | nucleus | 34.55 | 35.71 |
| Solyc02g089190.1.1 | Tomato | nucleus | 34.55 | 35.56 |
| CDX85285 | Canola | nucleus | 39.02 | 35.56 |
| AT3G30210.1 | Thale cress | nucleus | 39.43 | 35.14 |
| KRH01379 | Soybean | nucleus | 36.18 | 34.5 |
| KRH01378 | Soybean | nucleus | 39.02 | 34.41 |
| KRH45095 | Soybean | nucleus | 37.8 | 33.82 |
| CDY00083 | Canola | nucleus | 36.99 | 33.7 |
| Bra036202.1-P | Field mustard | nucleus | 36.18 | 33.33 |
| CDY19978 | Canola | nucleus | 36.18 | 33.33 |
| TraesCS3B01G258800.1 | Wheat | nucleus | 27.64 | 31.92 |
| TraesCS5B01G089200.1 | Wheat | nucleus | 30.49 | 31.65 |
| TraesCS1B01G055200.1 | Wheat | nucleus | 33.33 | 30.6 |
| TraesCS4B01G143700.1 | Wheat | nucleus | 29.27 | 30.25 |
| TraesCS3B01G612200.2 | Wheat | nucleus | 29.67 | 27.65 |
| CDY35782 | Canola | nucleus | 22.76 | 27.32 |
| TraesCS5B01G093000.1 | Wheat | nucleus | 28.86 | 25.54 |
| TraesCS1B01G436800.1 | Wheat | nucleus | 19.11 | 24.87 |
| TraesCS1B01G094500.1 | Wheat | nucleus | 32.93 | 24.85 |
| TraesCS3B01G453300.1 | Wheat | nucleus | 30.89 | 24.76 |
| TraesCS4B01G179500.1 | Wheat | nucleus | 30.49 | 23.58 |
| TraesCS3B01G039100.1 | Wheat | nucleus | 32.52 | 22.79 |
| TraesCS2B01G112600.1 | Wheat | nucleus | 28.86 | 21.39 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G344000.1 | EnsemblPlantsGene:TraesCS4B01G344000 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | ncoils:Coil |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF539 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : |
Description
No Description!
Coordinates
chr4B:+:637621778..637622676
Molecular Weight (calculated)
28192.3 Da
IEP (calculated)
7.002
GRAVY (calculated)
-0.787
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAMSSAVLQ GAWRKGPWTA LEDRLLTEYV QQQGEGSWNS VAKLTGLRRS GKSCRLRWVN YLRPDLKRGK ITADEETVIL QLHAMLGNRW SAIARCLPGR
101: TDNEIKNYWR THFKKARPSR RARAQLLHQY QLQQQQQHRQ YLHALHLLQQ QQQQMQMQLQ ENHHHQQQQQ AMMMAQQSPP EEDQAVITAV GNMNSMETAE
201: CYCPCPAASA VLDLPLPADD EDALWDSLWR LVDGEDGSSG GDSGEY
101: TDNEIKNYWR THFKKARPSR RARAQLLHQY QLQQQQQHRQ YLHALHLLQQ QQQQMQMQLQ ENHHHQQQQQ AMMMAQQSPP EEDQAVITAV GNMNSMETAE
201: CYCPCPAASA VLDLPLPADD EDALWDSLWR LVDGEDGSSG GDSGEY
001: METTMKKKGR VKATITSQKE EEGTVRKGPW TMEEDFILFN YILNHGEGLW NSVAKASGLK RTGKSCRLRW LNYLRPDVRR GNITEEEQLL IIQLHAKLGN
101: RWSKIAKHLP GRTDNEIKNF WRTKIQRHMK VSSENMMNHQ HHCSGNSQSS GMTTQGSSGK AIDTAESFSQ AKTTTFNVVE QQSNENYWNV EDLWPVHLLN
201: GDHHVI
101: RWSKIAKHLP GRTDNEIKNF WRTKIQRHMK VSSENMMNHQ HHCSGNSQSS GMTTQGSSGK AIDTAESFSQ AKTTTFNVVE QQSNENYWNV EDLWPVHLLN
201: GDHHVI
Arabidopsis Description
MYB57Transcription factor MYB57 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSA1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.