Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025410.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDX85285 | Canola | nucleus | 94.4 | 93.7 |
| CDY00083 | Canola | nucleus | 80.6 | 80.0 |
| CDY19978 | Canola | nucleus | 79.1 | 79.4 |
| CDY45895 | Canola | nucleus | 75.75 | 78.99 |
| CDY35782 | Canola | nucleus | 55.6 | 72.68 |
| AT3G30210.1 | Thale cress | nucleus | 74.63 | 72.46 |
| PGSC0003DMT400003479 | Potato | nucleus | 46.64 | 52.52 |
| Solyc02g089190.1.1 | Tomato | nucleus | 45.9 | 51.46 |
| VIT_14s0083g01060.t01 | Wine grape | nucleus | 47.39 | 51.42 |
| CDY58599 | Canola | nucleus | 19.03 | 48.11 |
| KRH01379 | Soybean | nucleus | 45.52 | 47.29 |
| GSMUA_Achr11P... | Banana | nucleus | 36.94 | 46.48 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 35.07 | 46.08 |
| KRH45095 | Soybean | nucleus | 45.52 | 44.36 |
| Zm00001d048383_P001 | Maize | nucleus | 37.69 | 43.53 |
| GSMUA_Achr11P... | Banana | nucleus | 37.31 | 43.48 |
| KRH01378 | Soybean | nucleus | 44.78 | 43.01 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 36.94 | 42.86 |
| HORVU0Hr1G005100.1 | Barley | nucleus | 35.45 | 42.22 |
| CDY61190 | Canola | nucleus | 41.04 | 42.15 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 38.06 | 41.98 |
| CDX77436 | Canola | nucleus | 40.3 | 41.54 |
| TraesCS2A01G363800.1 | Wheat | nucleus | 40.3 | 41.54 |
| TraesCS2B01G381800.1 | Wheat | nucleus | 39.93 | 41.47 |
| TraesCS2D01G361600.1 | Wheat | nucleus | 39.55 | 41.25 |
| CDY49231 | Canola | nucleus | 40.67 | 40.67 |
| EES07157 | Sorghum | nucleus | 43.66 | 40.62 |
| Zm00001d027623_P001 | Maize | nucleus | 37.69 | 40.56 |
| HORVU2Hr1G087990.1 | Barley | nucleus | 39.18 | 40.54 |
| Os03t0142600-00 | Rice | nucleus | 37.31 | 40.49 |
| CDX85422 | Canola | nucleus | 27.61 | 40.44 |
| HORVU6Hr1G057670.3 | Barley | nucleus | 40.67 | 40.37 |
| Zm00001d017243_P001 | Maize | nucleus | 42.16 | 40.21 |
| EER92876 | Sorghum | nucleus | 37.69 | 39.92 |
| TraesCS4B01G344000.1 | Wheat | nucleus | 36.57 | 39.84 |
| CDY64694 | Canola | nucleus | 40.67 | 39.78 |
| TraesCS6B01G254200.1 | Wheat | nucleus | 40.3 | 39.42 |
| TraesCS5A01G512700.1 | Wheat | nucleus | 36.19 | 39.11 |
| TraesCS6A01G227700.1 | Wheat | nucleus | 39.93 | 39.05 |
| CDX93006 | Canola | nucleus | 39.93 | 39.05 |
| Zm00001d025823_P001 | Maize | nucleus | 40.3 | 38.85 |
| Os02t0618400-02 | Rice | nucleus | 41.79 | 38.75 |
| TraesCS6D01G207300.1 | Wheat | nucleus | 39.55 | 38.55 |
| CDX94829 | Canola | nucleus | 39.18 | 38.46 |
| TraesCS4D01G339100.1 | Wheat | nucleus | 35.45 | 38.46 |
| CDX86220 | Canola | nucleus | 27.61 | 38.34 |
| KXG26684 | Sorghum | nucleus | 39.93 | 37.94 |
| CDX74303 | Canola | nucleus | 28.73 | 37.02 |
| Os04t0508500-01 | Rice | nucleus | 38.81 | 37.01 |
| HORVU4Hr1G084360.3 | Barley | nucleus | 36.94 | 36.8 |
| CDY37512 | Canola | nucleus | 27.24 | 36.32 |
| CDY49063 | Canola | nucleus | 27.99 | 36.23 |
| CDX91944 | Canola | nucleus | 27.99 | 36.23 |
| CDY00146 | Canola | nucleus | 22.39 | 36.14 |
| CDY70097 | Canola | nucleus | 30.22 | 34.32 |
| CDX88722 | Canola | nucleus | 30.97 | 34.3 |
| CDX71075 | Canola | nucleus | 30.6 | 34.02 |
| Zm00001d051117_P001 | Maize | nucleus | 34.7 | 33.33 |
| CDX80230 | Canola | nucleus | 29.48 | 33.33 |
| CDY49581 | Canola | nucleus | 29.48 | 33.33 |
| CDX67561 | Canola | nucleus | 29.1 | 32.5 |
| CDX73572 | Canola | nucleus | 29.48 | 32.24 |
| CDY13311 | Canola | nucleus | 29.1 | 31.97 |
| CDX78153 | Canola | nucleus | 29.1 | 31.84 |
| CDY20036 | Canola | nucleus | 26.87 | 31.03 |
| CDX86471 | Canola | nucleus | 26.49 | 30.6 |
| CDY44433 | Canola | nucleus | 26.49 | 30.6 |
| CDX95420 | Canola | nucleus | 25.75 | 29.74 |
| CDY42115 | Canola | nucleus | 29.1 | 28.16 |
| CDY69488 | Canola | nucleus | 29.1 | 28.16 |
| CDX86040 | Canola | nucleus | 29.1 | 28.06 |
| CDX86041 | Canola | nucleus | 29.1 | 28.06 |
| CDX99125 | Canola | nucleus | 29.1 | 28.06 |
| CDX96033 | Canola | nucleus | 29.48 | 27.82 |
| CDY01906 | Canola | nucleus | 29.48 | 27.72 |
| CDY69953 | Canola | nucleus | 29.1 | 27.66 |
| CDY27504 | Canola | nucleus | 27.99 | 27.57 |
| CDX84981 | Canola | nucleus | 29.48 | 27.43 |
| CDY03859 | Canola | nucleus | 29.1 | 27.18 |
| CDY54094 | Canola | nucleus | 28.73 | 27.02 |
| CDY12705 | Canola | nucleus | 28.36 | 26.67 |
| CDX99864 | Canola | nucleus | 30.97 | 25.94 |
| CDY34949 | Canola | nucleus | 30.97 | 25.94 |
| CDY24688 | Canola | nucleus | 30.6 | 25.71 |
| CDY05611 | Canola | nucleus | 30.22 | 25.47 |
| CDY33891 | Canola | nucleus | 30.22 | 25.47 |
| CDY05270 | Canola | nucleus | 30.6 | 25.47 |
| CDX80085 | Canola | nucleus | 17.16 | 23.12 |
| CDY70282 | Canola | nucleus | 25.0 | 22.79 |
| CDX74100 | Canola | nucleus | 23.88 | 18.99 |
| CDY58600 | Canola | nucleus | 17.16 | 14.24 |
| CDX86221 | Canola | nucleus | 1.49 | 5.71 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078DDE0 | EnsemblPlants:CDX86354 | ProteinID:CDX86354 | ProteinID:CDX86354.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00144479001 | InterPro:Homeobox-like_sf |
| InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF572 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000253FA6B | SEG:seg | : |
Description
BnaA06g30710D
Coordinates
chrLK031845:-:1131334..1132957
Molecular Weight (calculated)
31149.0 Da
IEP (calculated)
8.362
GRAVY (calculated)
-1.103
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDWGVDQVQ QRNHDLYQQQ QQQQGCRKGP WTPEEDKLLS EYVTSNGEGR WSSVAKCAGL NRSGKSCRLR WVNYLRPGLK RGQITPQEEG IILELHSLWG
101: NKWSTIARYL PGRTDNEIKN YWRTHYKKKE KSFSKQEKVK RSRKQLDLKP QSQQQPQQQN QSSQFVSEDH KKLDNEQNTF SYQTSVFFTD QFHMPQVVAA
201: TSSDHSMMDE GNLWGSLWSL DDHDPHHFGG CSEQRTASNV SEKFNGCGID APFCGSWDYS YNGFNTRL
101: NKWSTIARYL PGRTDNEIKN YWRTHYKKKE KSFSKQEKVK RSRKQLDLKP QSQQQPQQQN QSSQFVSEDH KKLDNEQNTF SYQTSVFFTD QFHMPQVVAA
201: TSSDHSMMDE GNLWGSLWSL DDHDPHHFGG CSEQRTASNV SEKFNGCGID APFCGSWDYS YNGFNTRL
001: MLDWGVQGHH QKHDHDIYQQ QHQQQGCRKG PWTLEEDKLL AEYVTSHGEG RWSTVAKCAG LNRSGKSCRL RWVNYLRPGL KRGQITPQEE GIILELHSLW
101: GNKWSTIARY LPGRTDNEIK NYWRTHYKKN QKSSSKQDKV KKSLSRKQQQ VDLKPQPQAQ SENHQSQLVS QDHMNIDNDH NIASSLYYPT SVFDDKLYMP
201: QSVATTSSDH SMIDEGHLWG SLWNLDEDDP HSFGGGSGQG TAADIDEKFP DSGIEAPSCG SGDYSYTGVY MGGYIF
101: GNKWSTIARY LPGRTDNEIK NYWRTHYKKN QKSSSKQDKV KKSLSRKQQQ VDLKPQPQAQ SENHQSQLVS QDHMNIDNDH NIASSLYYPT SVFDDKLYMP
201: QSVATTSSDH SMIDEGHLWG SLWNLDEDDP HSFGGGSGQG TAADIDEKFP DSGIEAPSCG SGDYSYTGVY MGGYIF
Arabidopsis Description
ATMYB121MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9LRU5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.