Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028550.1-P | Field mustard | nucleus | 96.67 | 96.67 |
| CDY13311 | Canola | nucleus | 92.5 | 90.98 |
| CDX73572 | Canola | nucleus | 84.58 | 82.86 |
| CDX78153 | Canola | nucleus | 81.25 | 79.59 |
| AT3G53200.1 | Thale cress | nucleus | 75.42 | 76.05 |
| VIT_08s0007g04830.t01 | Wine grape | nucleus | 35.83 | 69.92 |
| Solyc09g008390.1.1 | Tomato | nucleus | 30.83 | 56.49 |
| PGSC0003DMT400072687 | Potato | nucleus | 31.25 | 55.15 |
| KRH19953 | Soybean | nucleus | 41.25 | 43.23 |
| KRH32555 | Soybean | nucleus | 41.67 | 43.1 |
| CDY58599 | Canola | nucleus | 18.33 | 41.51 |
| Solyc10g083900.1.1 | Tomato | nucleus | 33.33 | 40.0 |
| CDX85422 | Canola | nucleus | 27.08 | 35.52 |
| CDX71075 | Canola | nucleus | 34.58 | 34.44 |
| CDX88722 | Canola | nucleus | 34.58 | 34.3 |
| CDX80230 | Canola | nucleus | 33.75 | 34.18 |
| CDY49581 | Canola | nucleus | 33.75 | 34.18 |
| CDY70097 | Canola | nucleus | 33.33 | 33.9 |
| CDX86220 | Canola | nucleus | 27.08 | 33.68 |
| CDX86040 | Canola | nucleus | 36.67 | 31.65 |
| CDY37512 | Canola | nucleus | 26.25 | 31.34 |
| CDY00146 | Canola | nucleus | 21.67 | 31.33 |
| CDX86041 | Canola | nucleus | 36.25 | 31.3 |
| CDX99125 | Canola | nucleus | 36.25 | 31.3 |
| CDX91944 | Canola | nucleus | 26.67 | 30.92 |
| CDX74303 | Canola | nucleus | 26.67 | 30.77 |
| CDY49063 | Canola | nucleus | 26.25 | 30.43 |
| CDY61190 | Canola | nucleus | 32.5 | 29.89 |
| CDX77436 | Canola | nucleus | 32.08 | 29.62 |
| CDY45895 | Canola | nucleus | 31.67 | 29.57 |
| CDX95420 | Canola | nucleus | 28.33 | 29.31 |
| CDX86354 | Canola | nucleus | 32.5 | 29.1 |
| CDX94829 | Canola | nucleus | 32.92 | 28.94 |
| CDX85285 | Canola | nucleus | 32.5 | 28.89 |
| CDY49231 | Canola | nucleus | 32.08 | 28.73 |
| CDY64694 | Canola | nucleus | 32.5 | 28.47 |
| CDY00083 | Canola | nucleus | 31.67 | 28.15 |
| CDX93006 | Canola | nucleus | 32.08 | 28.1 |
| CDY19978 | Canola | nucleus | 31.25 | 28.09 |
| CDX86471 | Canola | nucleus | 25.83 | 26.72 |
| CDY44433 | Canola | nucleus | 25.83 | 26.72 |
| CDY20036 | Canola | nucleus | 25.83 | 26.72 |
| CDY27504 | Canola | nucleus | 30.0 | 26.47 |
| CDX80085 | Canola | nucleus | 20.83 | 25.13 |
| CDY42115 | Canola | nucleus | 28.75 | 24.91 |
| CDX84981 | Canola | nucleus | 29.17 | 24.31 |
| CDY03859 | Canola | nucleus | 28.75 | 24.04 |
| CDY69488 | Canola | nucleus | 27.5 | 23.83 |
| CDY69953 | Canola | nucleus | 27.08 | 23.05 |
| CDY35782 | Canola | nucleus | 19.58 | 22.93 |
| CDY33891 | Canola | nucleus | 30.0 | 22.64 |
| CDY05611 | Canola | nucleus | 30.0 | 22.64 |
| CDY34949 | Canola | nucleus | 29.58 | 22.19 |
| CDX99864 | Canola | nucleus | 29.58 | 22.19 |
| CDX96033 | Canola | nucleus | 26.25 | 22.18 |
| CDY12705 | Canola | nucleus | 26.25 | 22.11 |
| CDY54094 | Canola | nucleus | 26.25 | 22.11 |
| CDY01906 | Canola | nucleus | 26.25 | 22.11 |
| CDY24688 | Canola | nucleus | 28.75 | 21.63 |
| CDY05270 | Canola | nucleus | 28.75 | 21.43 |
| CDY70282 | Canola | nucleus | 22.92 | 18.71 |
| CDX74100 | Canola | nucleus | 22.5 | 16.02 |
| CDY58600 | Canola | nucleus | 15.0 | 11.15 |
| CDX86221 | Canola | nucleus | 1.67 | 5.71 |
Protein Annotations
| EnsemblPlants:CDX67561 | EnsemblPlantsGene:GSBRNA2T00098694001 | Gene3D:1.10.10.60 | GO:A0A078BSE1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF636 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDX67561 | ProteinID:CDX67561.1 |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EDC487 | MapMan:15.5.2.1 | : | : |
Description
BnaA07g16010D
Coordinates
chrLK031787:-:938523..939513
Molecular Weight (calculated)
28600.8 Da
IEP (calculated)
7.023
GRAVY (calculated)
-0.928
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MDCKKEDALR RGPWLEEEDE RLVKFVTLLG ERRWDSLARV SGLKRSGKSC RLRWMNYLNP SLKCGPMSQE EEIIIFQLHA LWGNKWSNIA RRLPGRTDNQ
101: IKNYWRTHLR KKMDAQNYDK IIDWRGNKGE ELLHKYKETE IMWTRTKTRE HGFDETVKEY KQKNMESDKE TNGVICETER FGVMNSPYEN RIIDLISKSD
201: ANIFEDHGSS STDNNININV GSWWFQEIMD FEEFSCSLWS
101: IKNYWRTHLR KKMDAQNYDK IIDWRGNKGE ELLHKYKETE IMWTRTKTRE HGFDETVKEY KQKNMESDKE TNGVICETER FGVMNSPYEN RIIDLISKSD
201: ANIFEDHGSS STDNNININV GSWWFQEIMD FEEFSCSLWS
001: MDFKKEETLR RGPWLEEEDE RLVKVISLLG ERRWDSLAIV SGLKRSGKSC RLRWMNYLNP TLKRGPMSQE EERIIFQLHA LWGNKWSKIA RRLPGRTDNE
101: IKNYWRTHYR KKQEAQNYGK LFEWRGNTGE ELLHKYKETE ITRTKTTSQE HGFVEVVSME SGKEANGGVG GRESFGVMKS PYENRISDWI SEISTDQSEA
201: NLSEDHSSNS CSENNINIGT WWFQETRDFE EFSCSLWS
101: IKNYWRTHYR KKQEAQNYGK LFEWRGNTGE ELLHKYKETE ITRTKTTSQE HGFVEVVSME SGKEANGGVG GRESFGVMKS PYENRISDWI SEISTDQSEA
201: NLSEDHSSNS CSENNINIGT WWFQETRDFE EFSCSLWS
Arabidopsis Description
MYB27Transcription factor MYB27 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCP1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.