Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74303 | Canola | nucleus | 94.69 | 94.23 |
| CDY37512 | Canola | nucleus | 80.68 | 83.08 |
| CDY49063 | Canola | nucleus | 82.61 | 82.61 |
| AT3G01530.1 | Thale cress | nucleus | 78.26 | 78.64 |
| CDY58599 | Canola | nucleus | 27.05 | 52.83 |
| GSMUA_Achr1P27270_001 | Banana | nucleus | 45.41 | 47.96 |
| GSMUA_Achr6P27290_001 | Banana | nucleus | 44.44 | 47.18 |
| CDY00146 | Canola | nucleus | 36.23 | 45.18 |
| CDX85422 | Canola | nucleus | 39.13 | 44.26 |
| CDY44433 | Canola | nucleus | 47.83 | 42.67 |
| CDX86471 | Canola | nucleus | 47.83 | 42.67 |
| CDY20036 | Canola | nucleus | 47.83 | 42.67 |
| CDX86220 | Canola | nucleus | 39.13 | 41.97 |
| TraesCS1D01G415000.1 | Wheat | nucleus | 45.89 | 41.67 |
| TraesCS1A01G406600.1 | Wheat | mitochondrion | 46.38 | 38.55 |
| HORVU3Hr1G056980.1 | Barley | nucleus | 37.68 | 36.79 |
| TraesCS3A01G229500.1 | Wheat | nucleus | 37.2 | 36.67 |
| TraesCS3B01G258800.1 | Wheat | nucleus | 37.2 | 36.15 |
| TraesCS3D01G223700.1 | Wheat | nucleus | 37.2 | 35.98 |
| CDX95420 | Canola | nucleus | 40.1 | 35.78 |
| TraesCS1B01G436800.1 | Wheat | nucleus | 32.37 | 35.45 |
| HORVU1Hr1G089770.2 | Barley | nucleus | 45.89 | 32.42 |
| CDY27504 | Canola | nucleus | 42.03 | 31.99 |
| Zm00001d044107_P001 | Maize | nucleus | 40.1 | 31.44 |
| Os01t0637800-00 | Rice | mitochondrion, nucleus, plastid | 42.03 | 31.3 |
| CDY42115 | Canola | nucleus | 41.55 | 31.05 |
| CDY70097 | Canola | nucleus | 35.27 | 30.93 |
| CDX71075 | Canola | nucleus | 35.75 | 30.71 |
| CDY69488 | Canola | nucleus | 41.06 | 30.69 |
| CDY69953 | Canola | nucleus | 41.55 | 30.5 |
| CDY49581 | Canola | nucleus | 34.78 | 30.38 |
| CDX84981 | Canola | nucleus | 42.03 | 30.21 |
| CDY24688 | Canola | nucleus | 46.38 | 30.09 |
| CDY03859 | Canola | nucleus | 41.55 | 29.97 |
| CDX80230 | Canola | nucleus | 34.3 | 29.96 |
| CDY05270 | Canola | nucleus | 46.38 | 29.81 |
| CDX88722 | Canola | nucleus | 34.78 | 29.75 |
| CDY05611 | Canola | nucleus | 45.41 | 29.56 |
| CDY33891 | Canola | nucleus | 45.41 | 29.56 |
| CDY12705 | Canola | nucleus | 40.58 | 29.47 |
| CDY01906 | Canola | nucleus | 40.1 | 29.12 |
| CDY54094 | Canola | nucleus | 40.1 | 29.12 |
| CDX96033 | Canola | nucleus | 39.61 | 28.87 |
| CDX77436 | Canola | nucleus | 36.23 | 28.85 |
| CDX99864 | Canola | nucleus | 44.44 | 28.75 |
| CDY34949 | Canola | nucleus | 44.44 | 28.75 |
| CDX80085 | Canola | nucleus | 27.54 | 28.64 |
| CDY61190 | Canola | nucleus | 35.75 | 28.35 |
| EES01143 | Sorghum | nucleus | 39.61 | 27.99 |
| CDY49231 | Canola | nucleus | 36.23 | 27.99 |
| CDX86354 | Canola | nucleus | 36.23 | 27.99 |
| CDX99125 | Canola | nucleus | 37.2 | 27.7 |
| CDX86041 | Canola | nucleus | 37.2 | 27.7 |
| CDX85285 | Canola | nucleus | 35.75 | 27.41 |
| CDX93006 | Canola | nucleus | 36.23 | 27.37 |
| CDX86040 | Canola | nucleus | 36.72 | 27.34 |
| CDY45895 | Canola | nucleus | 33.82 | 27.24 |
| CDX94829 | Canola | nucleus | 35.75 | 27.11 |
| CDY64694 | Canola | nucleus | 35.75 | 27.01 |
| CDX67561 | Canola | nucleus | 30.92 | 26.67 |
| CDX78153 | Canola | nucleus | 31.4 | 26.53 |
| CDX73572 | Canola | nucleus | 31.4 | 26.53 |
| CDY13311 | Canola | nucleus | 30.92 | 26.23 |
| CDY00083 | Canola | nucleus | 33.82 | 25.93 |
| CDY19978 | Canola | nucleus | 33.33 | 25.84 |
| CDY70282 | Canola | nucleus | 35.75 | 25.17 |
| CDX74100 | Canola | nucleus | 33.82 | 20.77 |
| CDY35782 | Canola | nucleus | 18.84 | 19.02 |
| CDX86221 | Canola | nucleus | 5.31 | 15.71 |
| CDY58600 | Canola | nucleus | 21.74 | 13.93 |
| GSMUA_Achr9P07000_001 | Banana | nucleus | 43.48 | 7.16 |
Protein Annotations
| EnsemblPlants:CDX91944 | EnsemblPlantsGene:GSBRNA2T00153580001 | Gene3D:1.10.10.60 | GO:A0A078DTZ1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF688 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDX91944 | ProteinID:CDX91944.1 |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EEF25C | MapMan:15.5.2.1 | : | : |
Description
BnaC03g32460D
Coordinates
chrLK031870:+:930572..931765
Molecular Weight (calculated)
23853.2 Da
IEP (calculated)
9.685
GRAVY (calculated)
-0.807
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKTGRSGKD RITSQKEEEE GTVRKGPWTM EEDLILFNYI FNHGEGLWNS VAKASGLKRT GKSCRLRWLN YLRPDVRRGN ITAEEQLLII QLQAKLGNRW
101: SKIAKHLPGR TDNEIKNFWR TKIQRHMKLS SSETMNTRHC LGSSQSSVMT TTDQGSSSKA FHMAESLKST ETVTTSYNVM EQSNDSYWSV EDLWPVQLFN
201: DDHHQLL
101: SKIAKHLPGR TDNEIKNFWR TKIQRHMKLS SSETMNTRHC LGSSQSSVMT TTDQGSSSKA FHMAESLKST ETVTTSYNVM EQSNDSYWSV EDLWPVQLFN
201: DDHHQLL
001: METTMKKKGR VKATITSQKE EEGTVRKGPW TMEEDFILFN YILNHGEGLW NSVAKASGLK RTGKSCRLRW LNYLRPDVRR GNITEEEQLL IIQLHAKLGN
101: RWSKIAKHLP GRTDNEIKNF WRTKIQRHMK VSSENMMNHQ HHCSGNSQSS GMTTQGSSGK AIDTAESFSQ AKTTTFNVVE QQSNENYWNV EDLWPVHLLN
201: GDHHVI
101: RWSKIAKHLP GRTDNEIKNF WRTKIQRHMK VSSENMMNHQ HHCSGNSQSS GMTTQGSSGK AIDTAESFSQ AKTTTFNVVE QQSNENYWNV EDLWPVHLLN
201: GDHHVI
Arabidopsis Description
MYB57Transcription factor MYB57 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSA1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.