Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86354 | Canola | nucleus | 93.7 | 94.4 |
| CDY00083 | Canola | nucleus | 81.48 | 81.48 |
| CDY19978 | Canola | nucleus | 80.0 | 80.9 |
| CDY45895 | Canola | nucleus | 75.19 | 78.99 |
| AT3G30210.1 | Thale cress | nucleus | 75.93 | 74.28 |
| CDY35782 | Canola | nucleus | 56.3 | 74.15 |
| PGSC0003DMT400003479 | Potato | nucleus | 46.3 | 52.52 |
| VIT_14s0083g01060.t01 | Wine grape | nucleus | 47.41 | 51.82 |
| Solyc02g089190.1.1 | Tomato | nucleus | 45.56 | 51.46 |
| CDY58599 | Canola | nucleus | 18.89 | 48.11 |
| KRH01379 | Soybean | nucleus | 44.44 | 46.51 |
| GSMUA_Achr11P... | Banana | nucleus | 36.3 | 46.01 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 34.44 | 45.59 |
| KRH45095 | Soybean | nucleus | 44.44 | 43.64 |
| Zm00001d048383_P001 | Maize | nucleus | 37.04 | 43.1 |
| GSMUA_Achr11P... | Banana | nucleus | 36.67 | 43.04 |
| KRH01378 | Soybean | nucleus | 44.07 | 42.65 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 36.3 | 42.42 |
| CDY61190 | Canola | nucleus | 40.74 | 42.15 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 37.78 | 41.98 |
| HORVU0Hr1G005100.1 | Barley | nucleus | 34.81 | 41.78 |
| CDX77436 | Canola | nucleus | 40.0 | 41.54 |
| TraesCS2A01G363800.1 | Wheat | nucleus | 39.63 | 41.15 |
| TraesCS2B01G381800.1 | Wheat | nucleus | 39.26 | 41.09 |
| EES07157 | Sorghum | nucleus | 43.7 | 40.97 |
| TraesCS2D01G361600.1 | Wheat | nucleus | 38.89 | 40.86 |
| HORVU6Hr1G057670.3 | Barley | nucleus | 40.74 | 40.74 |
| CDY49231 | Canola | nucleus | 40.37 | 40.67 |
| Zm00001d017243_P001 | Maize | nucleus | 42.22 | 40.57 |
| HORVU2Hr1G087990.1 | Barley | nucleus | 38.52 | 40.15 |
| CDX85422 | Canola | nucleus | 27.04 | 39.89 |
| CDY64694 | Canola | nucleus | 40.37 | 39.78 |
| TraesCS6B01G254200.1 | Wheat | nucleus | 40.37 | 39.78 |
| Os03t0142600-00 | Rice | nucleus | 36.3 | 39.68 |
| TraesCS6A01G227700.1 | Wheat | nucleus | 40.0 | 39.42 |
| Zm00001d027623_P001 | Maize | nucleus | 36.3 | 39.36 |
| CDX93006 | Canola | nucleus | 39.63 | 39.05 |
| TraesCS4B01G344000.1 | Wheat | nucleus | 35.56 | 39.02 |
| TraesCS6D01G207300.1 | Wheat | nucleus | 39.63 | 38.91 |
| TraesCS4D01G339100.1 | Wheat | nucleus | 35.56 | 38.87 |
| Zm00001d025823_P001 | Maize | nucleus | 40.0 | 38.85 |
| Os02t0618400-02 | Rice | nucleus | 41.48 | 38.75 |
| EER92876 | Sorghum | nucleus | 36.3 | 38.74 |
| CDX94829 | Canola | nucleus | 38.89 | 38.46 |
| KXG26684 | Sorghum | nucleus | 39.63 | 37.94 |
| TraesCS5A01G512700.1 | Wheat | nucleus | 34.81 | 37.9 |
| CDX86220 | Canola | nucleus | 27.04 | 37.82 |
| HORVU4Hr1G084360.3 | Barley | nucleus | 36.67 | 36.8 |
| CDY00146 | Canola | nucleus | 22.59 | 36.75 |
| Os04t0508500-01 | Rice | nucleus | 38.15 | 36.65 |
| CDX74303 | Canola | nucleus | 28.15 | 36.54 |
| CDY49063 | Canola | nucleus | 27.78 | 36.23 |
| CDY37512 | Canola | nucleus | 26.67 | 35.82 |
| CDX91944 | Canola | nucleus | 27.41 | 35.75 |
| CDY70097 | Canola | nucleus | 30.37 | 34.75 |
| CDX88722 | Canola | nucleus | 31.11 | 34.71 |
| CDX71075 | Canola | nucleus | 30.37 | 34.02 |
| CDY49581 | Canola | nucleus | 29.63 | 33.76 |
| CDX80230 | Canola | nucleus | 29.63 | 33.76 |
| Zm00001d051117_P001 | Maize | nucleus | 34.81 | 33.69 |
| CDX73572 | Canola | nucleus | 29.63 | 32.65 |
| CDX67561 | Canola | nucleus | 28.89 | 32.5 |
| CDX78153 | Canola | nucleus | 29.26 | 32.24 |
| CDY13311 | Canola | nucleus | 28.89 | 31.97 |
| CDY20036 | Canola | nucleus | 27.04 | 31.47 |
| CDY44433 | Canola | nucleus | 26.67 | 31.03 |
| CDX86471 | Canola | nucleus | 26.67 | 31.03 |
| CDX95420 | Canola | nucleus | 25.93 | 30.17 |
| CDX86041 | Canola | nucleus | 29.63 | 28.78 |
| CDX99125 | Canola | nucleus | 29.63 | 28.78 |
| CDX86040 | Canola | nucleus | 29.63 | 28.78 |
| CDY27504 | Canola | nucleus | 28.52 | 28.31 |
| CDY42115 | Canola | nucleus | 28.89 | 28.16 |
| CDY69488 | Canola | nucleus | 28.89 | 28.16 |
| CDX96033 | Canola | nucleus | 29.26 | 27.82 |
| CDY01906 | Canola | nucleus | 29.26 | 27.72 |
| CDY69953 | Canola | nucleus | 28.89 | 27.66 |
| CDX84981 | Canola | nucleus | 29.26 | 27.43 |
| CDY03859 | Canola | nucleus | 28.89 | 27.18 |
| CDY54094 | Canola | nucleus | 28.52 | 27.02 |
| CDY12705 | Canola | nucleus | 28.15 | 26.67 |
| CDX99864 | Canola | nucleus | 30.0 | 25.31 |
| CDY34949 | Canola | nucleus | 30.0 | 25.31 |
| CDY24688 | Canola | nucleus | 29.63 | 25.08 |
| CDY05270 | Canola | nucleus | 29.63 | 24.84 |
| CDY05611 | Canola | nucleus | 29.26 | 24.84 |
| CDY33891 | Canola | nucleus | 29.26 | 24.84 |
| CDX80085 | Canola | nucleus | 17.41 | 23.62 |
| CDY70282 | Canola | nucleus | 24.07 | 22.11 |
| CDX74100 | Canola | nucleus | 22.96 | 18.4 |
| CDY58600 | Canola | nucleus | 17.04 | 14.24 |
| CDX86221 | Canola | nucleus | 1.48 | 5.71 |
Protein Annotations
| EnsemblPlants:CDX85285 | EnsemblPlantsGene:GSBRNA2T00142936001 | Gene3D:1.10.10.60 | GO:A0A078D7Y8 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF572 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDX85285 | ProteinID:CDX85285.1 |
| SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EAC8EB | MapMan:15.5.2.1 | : |
Description
BnaC07g25960D
Coordinates
chrLK031841:+:857664..859295
Molecular Weight (calculated)
31318.2 Da
IEP (calculated)
7.678
GRAVY (calculated)
-1.073
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDWGVDQVH HRNHDLYQQQ QQQQGCRKGP WTPEEDKLLV EYVTSNGEGR WSSVAKCAGL NRSGKSCRLR WVNYLRPGLK RGQITPQEEG IILELHSLWG
101: NKWSTIARYL PGRTDNEIKN YWRTHYKKKE KSFSKQEKVK RSRKQLDLKP QPQQQPHQQN QSSHFVSEDH MNLDNEQNTF SYQTGVFSDQ FHMPQVVAAT
201: SSDHSMMDEG NLWGSLWSLD DHDPHHFGGF SEQRTAANVS EKFNGCGIDA PFCGSWDYSY NGFNTGGYNY
101: NKWSTIARYL PGRTDNEIKN YWRTHYKKKE KSFSKQEKVK RSRKQLDLKP QPQQQPHQQN QSSHFVSEDH MNLDNEQNTF SYQTGVFSDQ FHMPQVVAAT
201: SSDHSMMDEG NLWGSLWSLD DHDPHHFGGF SEQRTAANVS EKFNGCGIDA PFCGSWDYSY NGFNTGGYNY
001: MLDWGVQGHH QKHDHDIYQQ QHQQQGCRKG PWTLEEDKLL AEYVTSHGEG RWSTVAKCAG LNRSGKSCRL RWVNYLRPGL KRGQITPQEE GIILELHSLW
101: GNKWSTIARY LPGRTDNEIK NYWRTHYKKN QKSSSKQDKV KKSLSRKQQQ VDLKPQPQAQ SENHQSQLVS QDHMNIDNDH NIASSLYYPT SVFDDKLYMP
201: QSVATTSSDH SMIDEGHLWG SLWNLDEDDP HSFGGGSGQG TAADIDEKFP DSGIEAPSCG SGDYSYTGVY MGGYIF
101: GNKWSTIARY LPGRTDNEIK NYWRTHYKKN QKSSSKQDKV KKSLSRKQQQ VDLKPQPQAQ SENHQSQLVS QDHMNIDNDH NIASSLYYPT SVFDDKLYMP
201: QSVATTSSDH SMIDEGHLWG SLWNLDEDDP HSFGGGSGQG TAADIDEKFP DSGIEAPSCG SGDYSYTGVY MGGYIF
Arabidopsis Description
ATMYB121MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9LRU5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.