Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039108.1-P | Field mustard | nucleus | 99.5 | 97.56 |
| CDY49063 | Canola | nucleus | 94.03 | 91.3 |
| CDX74303 | Canola | nucleus | 84.08 | 81.25 |
| CDX91944 | Canola | nucleus | 83.08 | 80.68 |
| AT3G01530.1 | Thale cress | nucleus | 77.11 | 75.24 |
| CDY58599 | Canola | nucleus | 27.86 | 52.83 |
| GSMUA_Achr1P27270_001 | Banana | nucleus | 47.26 | 48.47 |
| CDY00146 | Canola | nucleus | 37.81 | 45.78 |
| GSMUA_Achr6P27290_001 | Banana | nucleus | 44.28 | 45.64 |
| CDX85422 | Canola | nucleus | 41.29 | 45.36 |
| CDY20036 | Canola | nucleus | 49.75 | 43.1 |
| CDY44433 | Canola | nucleus | 49.75 | 43.1 |
| CDX86471 | Canola | nucleus | 49.75 | 43.1 |
| CDX86220 | Canola | nucleus | 40.8 | 42.49 |
| TraesCS1D01G415000.1 | Wheat | nucleus | 46.77 | 41.23 |
| TraesCS1A01G406600.1 | Wheat | mitochondrion | 47.26 | 38.15 |
| HORVU3Hr1G056980.1 | Barley | nucleus | 38.81 | 36.79 |
| TraesCS3A01G229500.1 | Wheat | nucleus | 38.31 | 36.67 |
| TraesCS3D01G223700.1 | Wheat | nucleus | 38.31 | 35.98 |
| TraesCS3B01G258800.1 | Wheat | nucleus | 37.81 | 35.68 |
| TraesCS1B01G436800.1 | Wheat | nucleus | 33.33 | 35.45 |
| CDX95420 | Canola | nucleus | 40.8 | 35.34 |
| HORVU1Hr1G089770.2 | Barley | nucleus | 47.26 | 32.42 |
| CDY69488 | Canola | nucleus | 43.78 | 31.77 |
| CDY42115 | Canola | nucleus | 43.78 | 31.77 |
| CDY27504 | Canola | nucleus | 42.79 | 31.62 |
| CDY69953 | Canola | nucleus | 44.28 | 31.56 |
| Zm00001d044107_P001 | Maize | nucleus | 41.29 | 31.44 |
| CDY70097 | Canola | nucleus | 36.82 | 31.36 |
| CDX84981 | Canola | nucleus | 44.28 | 30.9 |
| CDY12705 | Canola | nucleus | 43.78 | 30.88 |
| CDX71075 | Canola | nucleus | 36.82 | 30.71 |
| CDY03859 | Canola | nucleus | 43.78 | 30.66 |
| Os01t0637800-00 | Rice | mitochondrion, nucleus, plastid | 42.29 | 30.58 |
| CDY01906 | Canola | nucleus | 43.28 | 30.53 |
| CDX96033 | Canola | nucleus | 42.79 | 30.28 |
| CDY05611 | Canola | nucleus | 47.76 | 30.19 |
| CDY33891 | Canola | nucleus | 47.76 | 30.19 |
| CDY54094 | Canola | nucleus | 42.79 | 30.18 |
| CDY24688 | Canola | nucleus | 47.76 | 30.09 |
| CDY49581 | Canola | nucleus | 35.32 | 29.96 |
| CDY05270 | Canola | nucleus | 47.76 | 29.81 |
| CDX88722 | Canola | nucleus | 35.82 | 29.75 |
| CDX80230 | Canola | nucleus | 34.83 | 29.54 |
| CDX77436 | Canola | nucleus | 37.81 | 29.23 |
| EES01143 | Sorghum | nucleus | 42.29 | 29.01 |
| CDX99864 | Canola | nucleus | 45.77 | 28.75 |
| CDY34949 | Canola | nucleus | 45.77 | 28.75 |
| CDY49231 | Canola | nucleus | 37.81 | 28.36 |
| CDY61190 | Canola | nucleus | 36.82 | 28.35 |
| CDX80085 | Canola | nucleus | 27.86 | 28.14 |
| CDX94829 | Canola | nucleus | 37.81 | 27.84 |
| CDX93006 | Canola | nucleus | 37.81 | 27.74 |
| CDY45895 | Canola | nucleus | 35.32 | 27.63 |
| CDY64694 | Canola | nucleus | 37.31 | 27.37 |
| CDX86354 | Canola | nucleus | 36.32 | 27.24 |
| CDX85285 | Canola | nucleus | 35.82 | 26.67 |
| CDY13311 | Canola | nucleus | 32.34 | 26.64 |
| CDX86041 | Canola | nucleus | 36.82 | 26.62 |
| CDX86040 | Canola | nucleus | 36.82 | 26.62 |
| CDX99125 | Canola | nucleus | 36.82 | 26.62 |
| CDX78153 | Canola | nucleus | 32.34 | 26.53 |
| CDX73572 | Canola | nucleus | 32.34 | 26.53 |
| CDX67561 | Canola | nucleus | 31.34 | 26.25 |
| CDY00083 | Canola | nucleus | 34.83 | 25.93 |
| CDY70282 | Canola | nucleus | 37.81 | 25.85 |
| CDY19978 | Canola | nucleus | 34.33 | 25.84 |
| CDX74100 | Canola | nucleus | 35.32 | 21.07 |
| CDX86221 | Canola | nucleus | 6.97 | 20.0 |
| CDY35782 | Canola | nucleus | 19.4 | 19.02 |
| CDY58600 | Canola | nucleus | 23.38 | 14.55 |
| GSMUA_Achr9P07000_001 | Banana | nucleus | 44.78 | 7.16 |
Protein Annotations
| EnsemblPlants:CDY37512 | EnsemblPlantsGene:GSBRNA2T00064127001 | Gene3D:1.10.10.60 | GO:A0A078HI64 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF688 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDY37512 | ProteinID:CDY37512.1 |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EEC4C3 | UniProt:A0A078HI64 | MapMan:15.5.2.1 | : |
Description
BnaA05g33770DBnaA05g33770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HI64]
Coordinates
chrLK032402:+:87552..89021
Molecular Weight (calculated)
23072.5 Da
IEP (calculated)
10.240
GRAVY (calculated)
-0.743
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTKKTGIKK ERIPSQKEEE GTVRKGPWTM EEDLILFNYI LNHGEGLWNS VAKASGLKRT GKSCRLRWLN YLRPDVRRGN ITAEEHLLII QLHAKLGNRW
101: SKIAKYLPGR TDNEIKNFWR TKIQRHVKMS SSKNTNNIRH CLGNSQSSVI TATDQGSSSK GLISPATTTT SFHVMEQSND SYWNVEDIWP LQLLNDDHQV
201: I
101: SKIAKYLPGR TDNEIKNFWR TKIQRHVKMS SSKNTNNIRH CLGNSQSSVI TATDQGSSSK GLISPATTTT SFHVMEQSND SYWNVEDIWP LQLLNDDHQV
201: I
001: METTMKKKGR VKATITSQKE EEGTVRKGPW TMEEDFILFN YILNHGEGLW NSVAKASGLK RTGKSCRLRW LNYLRPDVRR GNITEEEQLL IIQLHAKLGN
101: RWSKIAKHLP GRTDNEIKNF WRTKIQRHMK VSSENMMNHQ HHCSGNSQSS GMTTQGSSGK AIDTAESFSQ AKTTTFNVVE QQSNENYWNV EDLWPVHLLN
201: GDHHVI
101: RWSKIAKHLP GRTDNEIKNF WRTKIQRHMK VSSENMMNHQ HHCSGNSQSS GMTTQGSSGK AIDTAESFSQ AKTTTFNVVE QQSNENYWNV EDLWPVHLLN
201: GDHHVI
Arabidopsis Description
MYB57Transcription factor MYB57 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSA1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.