Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039067.1-P | Field mustard | nucleus | 99.14 | 99.14 |
| AT3G27810.1 | Thale cress | nucleus | 90.09 | 92.48 |
| CDY44433 | Canola | nucleus | 89.22 | 89.22 |
| CDX86471 | Canola | nucleus | 88.79 | 88.79 |
| CDY00146 | Canola | nucleus | 61.21 | 85.54 |
| KRG94092 | Soybean | nucleus | 32.76 | 85.39 |
| Solyc02g067760.2.1 | Tomato | nucleus | 59.48 | 70.77 |
| VIT_14s0066g01090.t01 | Wine grape | nucleus | 55.6 | 68.25 |
| KRH07188 | Soybean | nucleus | 60.78 | 67.79 |
| KRG94086 | Soybean | nucleus | 59.48 | 66.99 |
| KRH56587 | Soybean | nucleus | 58.62 | 66.02 |
| KRG93265 | Soybean | nucleus | 57.33 | 64.88 |
| PGSC0003DMT400001278 | Potato | nucleus | 56.47 | 63.28 |
| GSMUA_Achr1P27270_001 | Banana | nucleus | 47.84 | 56.63 |
| CDY58599 | Canola | nucleus | 25.86 | 56.6 |
| GSMUA_Achr6P27290_001 | Banana | nucleus | 46.98 | 55.9 |
| CDX85422 | Canola | nucleus | 40.09 | 50.82 |
| CDY37512 | Canola | nucleus | 43.1 | 49.75 |
| CDY49063 | Canola | nucleus | 43.53 | 48.79 |
| CDX91944 | Canola | nucleus | 42.67 | 47.83 |
| CDX86220 | Canola | nucleus | 39.22 | 47.15 |
| CDX74303 | Canola | nucleus | 42.24 | 47.12 |
| TraesCS1D01G415000.1 | Wheat | nucleus | 42.67 | 43.42 |
| HORVU3Hr1G056980.1 | Barley | nucleus | 37.5 | 41.04 |
| TraesCS3A01G229500.1 | Wheat | nucleus | 37.07 | 40.95 |
| TraesCS3D01G223700.1 | Wheat | nucleus | 37.5 | 40.65 |
| TraesCS1A01G406600.1 | Wheat | mitochondrion | 43.53 | 40.56 |
| TraesCS3B01G258800.1 | Wheat | nucleus | 36.64 | 39.91 |
| TraesCS1B01G436800.1 | Wheat | nucleus | 31.9 | 39.15 |
| CDX95420 | Canola | nucleus | 38.79 | 38.79 |
| CDY27504 | Canola | nucleus | 41.81 | 35.66 |
| Zm00001d044107_P001 | Maize | nucleus | 40.09 | 35.23 |
| HORVU1Hr1G089770.2 | Barley | nucleus | 43.1 | 34.13 |
| CDY69488 | Canola | nucleus | 40.09 | 33.57 |
| CDY42115 | Canola | nucleus | 40.09 | 33.57 |
| CDY03859 | Canola | nucleus | 41.38 | 33.45 |
| CDX84981 | Canola | nucleus | 41.38 | 33.33 |
| CDX96033 | Canola | nucleus | 40.52 | 33.1 |
| CDY69953 | Canola | nucleus | 40.09 | 32.98 |
| CDY01906 | Canola | nucleus | 40.09 | 32.63 |
| CDY70097 | Canola | nucleus | 33.19 | 32.63 |
| EES01143 | Sorghum | nucleus | 40.52 | 32.08 |
| CDY49581 | Canola | nucleus | 32.76 | 32.07 |
| CDY12705 | Canola | nucleus | 39.22 | 31.93 |
| CDY54094 | Canola | nucleus | 39.22 | 31.93 |
| CDX77436 | Canola | nucleus | 35.78 | 31.92 |
| Os01t0637800-00 | Rice | mitochondrion, nucleus, plastid | 37.93 | 31.65 |
| CDX80230 | Canola | nucleus | 32.33 | 31.65 |
| CDY05611 | Canola | nucleus | 43.1 | 31.45 |
| CDY33891 | Canola | nucleus | 43.1 | 31.45 |
| CDY61190 | Canola | nucleus | 35.34 | 31.42 |
| CDX88722 | Canola | nucleus | 32.76 | 31.41 |
| CDX80085 | Canola | nucleus | 26.72 | 31.16 |
| CDX71075 | Canola | nucleus | 32.33 | 31.12 |
| CDX99864 | Canola | nucleus | 42.24 | 30.62 |
| CDY34949 | Canola | nucleus | 42.24 | 30.62 |
| CDY24688 | Canola | nucleus | 41.81 | 30.41 |
| CDY05270 | Canola | nucleus | 41.81 | 30.12 |
| CDX94829 | Canola | nucleus | 35.34 | 30.04 |
| CDY64694 | Canola | nucleus | 35.34 | 29.93 |
| CDX93006 | Canola | nucleus | 35.34 | 29.93 |
| CDY49231 | Canola | nucleus | 34.48 | 29.85 |
| CDY70282 | Canola | nucleus | 34.91 | 27.55 |
| CDX99125 | Canola | nucleus | 32.76 | 27.34 |
| CDX86041 | Canola | nucleus | 32.76 | 27.34 |
| CDY45895 | Canola | nucleus | 30.17 | 27.24 |
| CDX85285 | Canola | nucleus | 31.47 | 27.04 |
| CDY00083 | Canola | nucleus | 31.47 | 27.04 |
| CDX86040 | Canola | nucleus | 32.33 | 26.98 |
| CDY19978 | Canola | nucleus | 31.03 | 26.97 |
| CDX86354 | Canola | nucleus | 31.03 | 26.87 |
| CDY13311 | Canola | nucleus | 27.59 | 26.23 |
| CDX78153 | Canola | nucleus | 27.59 | 26.12 |
| CDX73572 | Canola | nucleus | 27.59 | 26.12 |
| CDX67561 | Canola | nucleus | 26.72 | 25.83 |
| CDX74100 | Canola | nucleus | 32.33 | 22.26 |
| CDY35782 | Canola | nucleus | 17.67 | 20.0 |
| CDY58600 | Canola | nucleus | 22.84 | 16.41 |
| CDX86221 | Canola | nucleus | 3.02 | 10.0 |
| GSMUA_Achr9P07000_001 | Banana | nucleus | 46.55 | 8.59 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078G3X3 | UniProt:A0A078G3X3 | EnsemblPlants:CDY20036 | ProteinID:CDY20036 |
| ProteinID:CDY20036.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00009873001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF531 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EE9E0B | SEG:seg |
Description
BnaA09g02150DBnaA09g02150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G3X3]
Coordinates
chrLK032102:-:564694..567260
Molecular Weight (calculated)
25932.1 Da
IEP (calculated)
6.722
GRAVY (calculated)
-0.693
Length
232 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKIGGISSG GTGSSGEAEV RKGPWTMEED LILINYIANH GDGVWNSLAK SAGLKRTGKS CRLRWLNYLR PDVRRGNITP EEQLTIMELH AKWGNRWSKI
101: AKHLPGRTDN EIKNFWRTRI QKYIKQTDVT ATTTSSVGSH HSSEINDQVA STSNHNVFCT QDQAMETYSP TTTSYQHTNM DFNYGNFSAA AATVTATTTA
201: DYSIPMTVDD QNGENYWGMD DIWSSMHLLN GN
101: AKHLPGRTDN EIKNFWRTRI QKYIKQTDVT ATTTSSVGSH HSSEINDQVA STSNHNVFCT QDQAMETYSP TTTSYQHTNM DFNYGNFSAA AATVTATTTA
201: DYSIPMTVDD QNGENYWGMD DIWSSMHLLN GN
001: MEKRGGGSSG GSGSSAEAEV RKGPWTMEED LILINYIANH GDGVWNSLAK SAGLKRTGKS CRLRWLNYLR PDVRRGNITP EEQLIIMELH AKWGNRWSKI
101: AKHLPGRTDN EIKNFWRTRI QKYIKQSDVT TTSSVGSHHS SEINDQAAST SSHNVFCTQD QAMETYSPTP TSYQHTNMEF NYGNYSAAAV TATVDYPVPM
201: TVDDQTGENY WGMDDIWSSM HLLNGN
101: AKHLPGRTDN EIKNFWRTRI QKYIKQSDVT TTSSVGSHHS SEINDQAAST SSHNVFCTQD QAMETYSPTP TSYQHTNMEF NYGNYSAAAV TATVDYPVPM
201: TVDDQTGENY WGMDDIWSSM HLLNGN
Arabidopsis Description
MYB21Transcription factor MYB21 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK95]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.