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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra020744.1-P Field mustard nucleus 100.0 100.0
CDY35782 Canola nucleus 67.7 84.88
CDX86354 Canola nucleus 78.99 75.75
CDX85285 Canola nucleus 78.99 75.19
CDY00083 Canola nucleus 78.21 74.44
CDY19978 Canola nucleus 75.88 73.03
AT3G30210.1 Thale cress nucleus 75.1 69.93
PGSC0003DMT400003479 Potato nucleus 45.14 48.74
VIT_14s0083g01060.t01 Wine grape nucleus 45.91 47.77
CDY58599 Canola nucleus 19.46 47.17
Solyc02g089190.1.1 Tomato nucleus 43.58 46.86
GSMUA_Achr4P29230_001 Banana nucleus 35.8 45.1
GSMUA_Achr11P... Banana nucleus 37.35 45.07
KRH01379 Soybean nucleus 44.75 44.57
KRH45095 Soybean nucleus 44.36 41.45
GSMUA_Achr11P... Banana nucleus 36.97 41.3
GSMUA_Achr8P12710_001 Banana nucleus 36.97 41.13
Zm00001d048383_P001 Maize nucleus 36.97 40.95
KRH01378 Soybean nucleus 44.36 40.86
Os03t0142600-00 Rice nucleus 38.91 40.49
GSMUA_Achr1P03450_001 Banana nucleus 37.35 39.51
CDX77436 Canola nucleus 39.69 39.23
TraesCS4B01G344000.1 Wheat nucleus 37.35 39.02
HORVU6Hr1G057670.3 Barley nucleus 40.86 38.89
CDX85422 Canola nucleus 27.63 38.8
TraesCS5A01G512700.1 Wheat nucleus 37.35 38.71
CDY61190 Canola nucleus 39.3 38.7
HORVU0Hr1G005100.1 Barley nucleus 33.85 38.67
TraesCS2D01G361600.1 Wheat nucleus 38.52 38.52
TraesCS4D01G339100.1 Wheat nucleus 36.97 38.46
TraesCS2B01G381800.1 Wheat nucleus 38.52 38.37
HORVU2Hr1G087990.1 Barley nucleus 38.52 38.22
TraesCS2A01G363800.1 Wheat nucleus 38.52 38.08
EER92876 Sorghum nucleus 37.35 37.94
CDY49231 Canola nucleus 39.3 37.69
TraesCS6B01G254200.1 Wheat nucleus 40.08 37.59
Zm00001d027623_P001 Maize nucleus 36.19 37.35
TraesCS6A01G227700.1 Wheat nucleus 39.69 37.23
EES07157 Sorghum nucleus 41.63 37.15
Zm00001d017243_P001 Maize nucleus 40.47 37.01
CDX86220 Canola nucleus 27.63 36.79
TraesCS6D01G207300.1 Wheat nucleus 39.3 36.73
CDY64694 Canola nucleus 38.91 36.5
Os02t0618400-02 Rice nucleus 40.86 36.33
HORVU4Hr1G084360.3 Barley nucleus 37.74 36.06
Zm00001d025823_P001 Maize nucleus 38.91 35.97
CDX93006 Canola nucleus 38.13 35.77
CDY00146 Canola nucleus 22.96 35.54
CDX94829 Canola nucleus 37.74 35.53
CDY37512 Canola nucleus 27.63 35.32
KXG26684 Sorghum nucleus 38.52 35.11
CDX74303 Canola nucleus 28.02 34.62
CDY49063 Canola nucleus 27.63 34.3
CDX91944 Canola nucleus 27.24 33.82
Os04t0508500-01 Rice nucleus 36.97 33.81
CDY70097 Canola nucleus 30.35 33.05
CDX88722 Canola nucleus 30.74 32.64
CDX71075 Canola nucleus 30.35 32.37
CDX67561 Canola nucleus 29.57 31.67
CDY49581 Canola nucleus 29.18 31.65
CDX80230 Canola nucleus 29.18 31.65
CDY13311 Canola nucleus 29.57 31.15
CDX78153 Canola nucleus 29.57 31.02
CDX73572 Canola nucleus 29.57 31.02
Zm00001d051117_P001 Maize nucleus 33.46 30.82
CDY20036 Canola nucleus 27.24 30.17
CDX86471 Canola nucleus 26.85 29.74
CDY44433 Canola nucleus 26.85 29.74
CDX95420 Canola nucleus 26.85 29.74
CDY69488 Canola nucleus 30.35 28.16
CDX96033 Canola nucleus 30.74 27.82
CDY01906 Canola nucleus 30.74 27.72
CDY69953 Canola nucleus 30.35 27.66
CDX99125 Canola nucleus 29.57 27.34
CDX86040 Canola nucleus 29.57 27.34
CDX86041 Canola nucleus 29.57 27.34
CDY42115 Canola nucleus 29.18 27.08
CDY27504 Canola nucleus 28.4 26.84
CDY54094 Canola nucleus 29.57 26.67
CDX84981 Canola nucleus 29.57 26.39
CDY12705 Canola nucleus 29.18 26.32
CDY03859 Canola nucleus 29.18 26.13
CDY33891 Canola nucleus 30.74 24.84
CDY05611 Canola nucleus 30.74 24.84
CDY34949 Canola nucleus 30.74 24.69
CDX99864 Canola nucleus 30.74 24.69
CDY24688 Canola nucleus 30.35 24.45
CDY05270 Canola nucleus 30.35 24.22
CDX80085 Canola nucleus 18.68 24.12
CDY70282 Canola nucleus 25.29 22.11
CDX74100 Canola nucleus 23.74 18.1
CDY58600 Canola nucleus 17.51 13.93
CDX86221 Canola nucleus 1.56 5.71
Protein Annotations
Gene3D:1.10.10.60MapMan:15.5.2.1GO:A0A078I4T4UniProt:A0A078I4T4EnsemblPlants:CDY45895ProteinID:CDY45895
ProteinID:CDY45895.1GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488EnsemblPlantsGene:GSBRNA2T00082879001
InterPro:Homeobox-like_sfInterPro:IPR017930InterPro:Myb_domPFAM:PF00249PFscan:PS51294PANTHER:PTHR10641
PANTHER:PTHR10641:SF572InterPro:SANT/MybSMART:SM00717SUPFAM:SSF46689UniParc:UPI0002545F6FSEG:seg
Description
BnaAnng07760DBnaAnng07760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I4T4]
Coordinates
chrLK032641:+:4310..8005
Molecular Weight (calculated)
29649.6 Da
IEP (calculated)
9.521
GRAVY (calculated)
-1.077
Length
257 amino acids
Sequence
(BLAST)
001: MLDLGADQVH QLTHDHDPYQ KQQQQLQGFR KGPWTPAEDK LLTEYVTSNG EGKWSSVAKC AGLNRSGKSC RLRWVNYLRP GLKRGQITPQ EEGIILELHF
101: LWGNKWSTIA RYLPGRTDNE IKNYWRTHYK KKDKSFSKQD KFKRSRKQLG MQPQPHNQRS QMVSRNHMNH DNEQNIASSF SYPTSVIHDQ FHMPQSVTAT
201: SSDHSMTDEG NLWGSLWSLN DEDRPHRFGG GWEQRIAADI SEKFNGDRIE APPCGSG
Best Arabidopsis Sequence Match ( AT3G30210.1 )
(BLAST)
001: MLDWGVQGHH QKHDHDIYQQ QHQQQGCRKG PWTLEEDKLL AEYVTSHGEG RWSTVAKCAG LNRSGKSCRL RWVNYLRPGL KRGQITPQEE GIILELHSLW
101: GNKWSTIARY LPGRTDNEIK NYWRTHYKKN QKSSSKQDKV KKSLSRKQQQ VDLKPQPQAQ SENHQSQLVS QDHMNIDNDH NIASSLYYPT SVFDDKLYMP
201: QSVATTSSDH SMIDEGHLWG SLWNLDEDDP HSFGGGSGQG TAADIDEKFP DSGIEAPSCG SGDYSYTGVY MGGYIF
Arabidopsis Description
ATMYB121MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9LRU5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.