Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006694.1-P | Field mustard | nucleus | 98.76 | 98.76 |
| CDX71075 | Canola | nucleus | 95.45 | 95.85 |
| AT5G59780.3 | Thale cress | nucleus | 88.84 | 91.49 |
| CDY49581 | Canola | nucleus | 88.84 | 90.72 |
| CDY70097 | Canola | nucleus | 88.43 | 90.68 |
| CDX80230 | Canola | nucleus | 87.19 | 89.03 |
| CDX86040 | Canola | nucleus | 76.45 | 66.55 |
| CDX86041 | Canola | nucleus | 76.03 | 66.19 |
| CDX99125 | Canola | nucleus | 76.03 | 66.19 |
| GSMUA_Achr2P16200_001 | Banana | nucleus | 48.35 | 57.07 |
| GSMUA_Achr6P15370_001 | Banana | nucleus | 49.17 | 56.94 |
| TraesCS4B01G143700.1 | Wheat | nucleus | 55.79 | 56.72 |
| TraesCS4D01G142300.1 | Wheat | nucleus | 55.79 | 56.72 |
| TraesCS4A01G173300.2 | Wheat | nucleus | 55.37 | 56.3 |
| VIT_06s0004g04140.t01 | Wine grape | nucleus | 58.68 | 55.47 |
| HORVU5Hr1G021750.2 | Barley | nucleus | 54.13 | 55.27 |
| GSMUA_Achr10P... | Banana | nucleus | 51.24 | 54.87 |
| Os11t0700500-01 | Rice | nucleus | 53.31 | 54.43 |
| TraesCS5B01G089200.1 | Wheat | nucleus | 53.31 | 54.43 |
| KRH10298 | Soybean | nucleus | 57.02 | 54.12 |
| TraesCS5D01G095600.1 | Wheat | nucleus | 52.89 | 54.01 |
| Solyc11g073120.1.1 | Tomato | nucleus | 48.35 | 53.92 |
| PGSC0003DMT400040149 | Potato | nucleus | 48.35 | 53.67 |
| TraesCS5A01G083100.1 | Wheat | nucleus | 52.48 | 53.59 |
| GSMUA_Achr10P... | Banana | nucleus | 52.07 | 53.39 |
| GSMUA_Achr10P... | Banana | nucleus | 46.69 | 53.3 |
| KRH23019 | Soybean | nucleus | 57.85 | 53.03 |
| KXG23736 | Sorghum | nucleus | 52.48 | 52.92 |
| GSMUA_Achr11P... | Banana | nucleus | 52.48 | 52.7 |
| Os12t0567300-00 | Rice | nucleus | 52.48 | 52.48 |
| Solyc06g005330.2.1 | Tomato | nucleus | 50.83 | 52.12 |
| GSMUA_Achr9P28370_001 | Banana | nucleus | 45.87 | 51.87 |
| KXG29192 | Sorghum | nucleus | 48.76 | 51.75 |
| Zm00001d030678_P001 | Maize | nucleus | 51.65 | 51.65 |
| GSMUA_Achr5P28350_001 | Banana | nucleus | 50.41 | 51.48 |
| KRH29850 | Soybean | nucleus | 56.2 | 51.13 |
| GSMUA_Achr8P34340_001 | Banana | nucleus | 51.65 | 51.02 |
| Zm00001d048623_P002 | Maize | nucleus | 47.93 | 50.88 |
| Zm00001d041576_P001 | Maize | nucleus | 52.48 | 50.8 |
| KRH24842 | Soybean | nucleus | 55.79 | 50.75 |
| GSMUA_Achr7P18200_001 | Banana | nucleus | 50.0 | 50.21 |
| CDY58599 | Canola | nucleus | 21.07 | 48.11 |
| GSMUA_Achr8P02640_001 | Banana | nucleus | 45.04 | 46.19 |
| TraesCS1D01G043300.1 | Wheat | nucleus | 43.39 | 41.34 |
| TraesCS1B01G055200.1 | Wheat | nucleus | 43.8 | 39.55 |
| HORVU1Hr1G008810.3 | Barley | nucleus | 41.74 | 39.15 |
| TraesCS3D01G540600.1 | Wheat | nucleus | 40.91 | 38.67 |
| TraesCS1A01G042700.1 | Wheat | nucleus | 41.74 | 38.4 |
| TraesCS3A01G535100.1 | Wheat | nucleus | 40.91 | 38.08 |
| CDX85422 | Canola | nucleus | 28.1 | 37.16 |
| TraesCS3B01G612200.2 | Wheat | nucleus | 40.5 | 37.12 |
| CDY00146 | Canola | nucleus | 24.79 | 36.14 |
| CDY37512 | Canola | nucleus | 29.75 | 35.82 |
| CDX78153 | Canola | nucleus | 35.95 | 35.51 |
| CDY49063 | Canola | nucleus | 30.17 | 35.27 |
| CDX86220 | Canola | nucleus | 28.1 | 35.23 |
| CDX73572 | Canola | nucleus | 35.54 | 35.1 |
| KXG29190 | Sorghum | nucleus | 30.58 | 34.91 |
| CDX91944 | Canola | nucleus | 29.75 | 34.78 |
| CDX67561 | Canola | nucleus | 34.3 | 34.58 |
| Os01t0975300-01 | Rice | vacuole | 29.75 | 34.29 |
| CDX74303 | Canola | nucleus | 29.34 | 34.13 |
| CDY13311 | Canola | nucleus | 34.3 | 34.02 |
| OQU77249 | Sorghum | nucleus | 42.98 | 33.77 |
| CDX95420 | Canola | nucleus | 31.41 | 32.76 |
| CDY20036 | Canola | nucleus | 31.41 | 32.76 |
| CDX86471 | Canola | nucleus | 30.99 | 32.33 |
| CDY44433 | Canola | nucleus | 30.99 | 32.33 |
| Zm00001d035605_P001 | Maize | nucleus | 43.39 | 32.11 |
| CDX77436 | Canola | nucleus | 33.88 | 31.54 |
| CDY61190 | Canola | nucleus | 33.88 | 31.42 |
| CDX85285 | Canola | nucleus | 34.71 | 31.11 |
| CDX86354 | Canola | nucleus | 34.3 | 30.97 |
| EES17592 | Sorghum | nucleus | 42.56 | 30.84 |
| CDY45895 | Canola | nucleus | 32.64 | 30.74 |
| CDY49231 | Canola | nucleus | 33.88 | 30.6 |
| CDY00083 | Canola | nucleus | 33.88 | 30.37 |
| CDY19978 | Canola | nucleus | 33.47 | 30.34 |
| CDY27504 | Canola | nucleus | 33.47 | 29.78 |
| CDX80085 | Canola | nucleus | 24.38 | 29.65 |
| CDX93006 | Canola | nucleus | 33.47 | 29.56 |
| CDY64694 | Canola | nucleus | 33.47 | 29.56 |
| CDX94829 | Canola | nucleus | 33.06 | 29.3 |
| CDY03859 | Canola | nucleus | 33.88 | 28.57 |
| CDY69488 | Canola | nucleus | 32.64 | 28.52 |
| CDY42115 | Canola | nucleus | 32.23 | 28.16 |
| CDY69953 | Canola | nucleus | 32.64 | 28.01 |
| CDX96033 | Canola | nucleus | 32.64 | 27.82 |
| CDX84981 | Canola | nucleus | 33.06 | 27.78 |
| CDY01906 | Canola | nucleus | 32.64 | 27.72 |
| Zm00001d035604_P001 | Maize | nucleus | 42.15 | 27.72 |
| CDY12705 | Canola | nucleus | 32.23 | 27.37 |
| CDY54094 | Canola | nucleus | 31.82 | 27.02 |
| CDY05611 | Canola | nucleus | 31.82 | 24.21 |
| CDY33891 | Canola | nucleus | 31.82 | 24.21 |
| CDY24688 | Canola | nucleus | 31.82 | 24.14 |
| CDY05270 | Canola | nucleus | 31.82 | 23.91 |
| CDY35782 | Canola | nucleus | 20.25 | 23.9 |
| CDY70282 | Canola | nucleus | 28.51 | 23.47 |
| CDX99864 | Canola | nucleus | 30.99 | 23.44 |
| CDY34949 | Canola | nucleus | 30.99 | 23.44 |
| CDX74100 | Canola | nucleus | 26.45 | 18.99 |
| CDY58600 | Canola | nucleus | 19.83 | 14.86 |
| CDX86221 | Canola | nucleus | 3.31 | 11.43 |
Protein Annotations
| EnsemblPlants:CDX88722 | EnsemblPlantsGene:GSBRNA2T00148774001 | Gene3D:1.10.10.60 | GO:A0A078DIE0 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF484 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDX88722 | ProteinID:CDX88722.1 |
| SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EEB548 | MapMan:15.5.2.1 | : |
Description
BnaA03g09270D
Coordinates
chrLK031856:-:674849..676020
Molecular Weight (calculated)
27972.9 Da
IEP (calculated)
8.459
GRAVY (calculated)
-0.860
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSVQEEYRK GPWTEQEDLL LVNFVHMFGD RRWDFVAKVS GLNRTGKSCR LRWVNYLHPG LKRGKMTPQE EHLVLELHAK WGNRWSKIAR KLPGRTDNEI
101: KNYWRTHMRK KSQEKKKRPM SPTSSSSNCC SSSMTTAATQ DTGGTNGKMN QECEEGGYYS MDDIWREIDQ SGANIIKPVK DIYYSDQSCY LDFPPLASPA
201: WESSMESIWN MDADESKMSS FAIDQFPLSF EHGRSSSWSS LL
101: KNYWRTHMRK KSQEKKKRPM SPTSSSSNCC SSSMTTAATQ DTGGTNGKMN QECEEGGYYS MDDIWREIDQ SGANIIKPVK DIYYSDQSCY LDFPPLASPA
201: WESSMESIWN MDADESKMSS FAIDQFPLSF EHGRSSSWSS LL
001: MKLVQEEYRK GPWTEQEDIL LVNFVHLFGD RRWDFVAKVS GLNRTGKSCR LRWVNYLHPG LKRGKMTPQE ERLVLELHAK WGNRWSKIAR KLPGRTDNEI
101: KNYWRTHMRK KAQEKKRPMS PTSSSSNCCS SSMTTTTSQD TGGSNGKMNQ ECEDGYYSMD DIWREIDQSG ANVIKPVKDN YYSEQSCYLN FPPLASPTWE
201: SSLESIWNMD ADESKMSSFA IDQFPLSFEH GSGRL
101: KNYWRTHMRK KAQEKKRPMS PTSSSSNCCS SSMTTTTSQD TGGSNGKMNQ ECEDGYYSMD DIWREIDQSG ANVIKPVKDN YYSEQSCYLN FPPLASPTWE
201: SSLESIWNMD ADESKMSSFA IDQFPLSFEH GSGRL
Arabidopsis Description
MYB59Transcription factor MYB59 [Source:UniProtKB/Swiss-Prot;Acc:Q4JL84]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.