Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G089200.1 | Wheat | nucleus | 99.58 | 99.58 |
| TraesCS5A01G083100.1 | Wheat | nucleus | 99.16 | 99.16 |
| HORVU5Hr1G021750.2 | Barley | nucleus | 95.78 | 95.78 |
| KXG23736 | Sorghum | nucleus | 82.7 | 81.67 |
| Os12t0567300-00 | Rice | nucleus | 83.12 | 81.41 |
| Zm00001d030678_P001 | Maize | nucleus | 81.01 | 79.34 |
| Zm00001d041576_P001 | Maize | nucleus | 80.59 | 76.4 |
| TraesCS4D01G142300.1 | Wheat | nucleus | 67.93 | 67.65 |
| AT5G59780.3 | Thale cress | nucleus | 56.12 | 56.6 |
| Solyc11g073120.1.1 | Tomato | nucleus | 50.63 | 55.3 |
| PGSC0003DMT400040149 | Potato | nucleus | 50.63 | 55.05 |
| CDX71075 | Canola | nucleus | 55.7 | 54.77 |
| CDY70097 | Canola | nucleus | 54.43 | 54.66 |
| Bra020289.1-P | Field mustard | nucleus | 54.43 | 54.66 |
| Bra002533.1-P | Field mustard | nucleus | 54.01 | 54.01 |
| CDY49581 | Canola | nucleus | 54.01 | 54.01 |
| Bra006694.1-P | Field mustard | nucleus | 54.85 | 53.72 |
| CDX80230 | Canola | nucleus | 53.59 | 53.59 |
| Bra018223.1-P | Field mustard | nucleus | 56.54 | 53.17 |
| CDX88722 | Canola | nucleus | 54.01 | 52.89 |
| Solyc06g005330.2.1 | Tomato | nucleus | 51.9 | 52.12 |
| VIT_06s0004g04140.t01 | Wine grape | nucleus | 55.7 | 51.56 |
| AT3G46130.1 | Thale cress | nucleus | 55.7 | 51.16 |
| KRH10298 | Soybean | nucleus | 52.74 | 49.02 |
| CDX86040 | Canola | nucleus | 56.96 | 48.56 |
| KRH23019 | Soybean | nucleus | 54.01 | 48.48 |
| CDX86041 | Canola | nucleus | 56.54 | 48.2 |
| CDX99125 | Canola | nucleus | 56.54 | 48.2 |
| TraesCS1D01G043300.1 | Wheat | nucleus | 48.95 | 45.67 |
| KRH29850 | Soybean | nucleus | 50.63 | 45.11 |
| KRH24842 | Soybean | nucleus | 49.79 | 44.36 |
| TraesCS3D01G540600.1 | Wheat | nucleus | 45.57 | 42.19 |
| TraesCS3D01G223700.1 | Wheat | nucleus | 31.22 | 34.58 |
| TraesCS1D01G415000.1 | Wheat | nucleus | 31.65 | 32.89 |
| TraesCS4D01G339100.1 | Wheat | nucleus | 32.07 | 30.77 |
| TraesCS2D01G361600.1 | Wheat | nucleus | 32.91 | 30.35 |
| TraesCS6D01G207300.1 | Wheat | nucleus | 32.91 | 28.36 |
| TraesCS5D01G099100.1 | Wheat | nucleus | 31.65 | 26.98 |
| TraesCS3D01G413700.1 | Wheat | nucleus | 32.49 | 26.28 |
| TraesCS4D01G142900.1 | Wheat | nucleus | 31.65 | 25.6 |
| TraesCS1D01G078600.1 | Wheat | nucleus | 34.6 | 25.39 |
| TraesCS4D01G181100.1 | Wheat | nucleus | 33.33 | 24.76 |
| TraesCS3D01G014800.1 | Wheat | nucleus | 28.27 | 24.1 |
| TraesCS3D01G036200.1 | Wheat | nucleus | 33.76 | 23.26 |
| TraesCS2D01G096000.1 | Wheat | nucleus | 31.65 | 22.87 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G095600.1 | EnsemblPlantsGene:TraesCS5D01G095600 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF484 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
| TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr5D:+:105103682..105104612
Molecular Weight (calculated)
27195.4 Da
IEP (calculated)
9.786
GRAVY (calculated)
-0.791
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MVTVREETRK GPWTEQEDMQ LVCTVRLFGE RRWDFIAKVS GLNRTGKSCR LRWVNYLHPG LKRGRMTPHE ERLILELHAR WGNRWSRIAR KLPGRTDNEI
101: KNYWRTHMRK KAQERKRNVS PSSSSSSVTY QSIQPQTPSI MGIGEQELHG GSSCITSILK GTPADMDGYL MDQIWMEIEA PSGVNFHDGK DNSYSSPSGP
201: LLPSPMWDYY SPEAGWKMDE IKMAPQVSYS KGIGPSY
101: KNYWRTHMRK KAQERKRNVS PSSSSSSVTY QSIQPQTPSI MGIGEQELHG GSSCITSILK GTPADMDGYL MDQIWMEIEA PSGVNFHDGK DNSYSSPSGP
201: LLPSPMWDYY SPEAGWKMDE IKMAPQVSYS KGIGPSY
001: MKLVQEEYRK GPWTEQEDIL LVNFVHLFGD RRWDFVAKVS GLNRTGKSCR LRWVNYLHPG LKRGKMTPQE ERLVLELHAK WGNRWSKIAR KLPGRTDNEI
101: KNYWRTHMRK KAQEKKRPMS PTSSSSNCCS SSMTTTTSQD TGGSNGKMNQ ECEDGYYSMD DIWREIDQSG ANVIKPVKDN YYSEQSCYLN FPPLASPTWE
201: SSLESIWNMD ADESKMSSFA IDQFPLSFEH GSGRL
101: KNYWRTHMRK KAQEKKRPMS PTSSSSNCCS SSMTTTTSQD TGGSNGKMNQ ECEDGYYSMD DIWREIDQSG ANVIKPVKDN YYSEQSCYLN FPPLASPTWE
201: SSLESIWNMD ADESKMSSFA IDQFPLSFEH GSGRL
Arabidopsis Description
MYB59Transcription factor MYB59 [Source:UniProtKB/Swiss-Prot;Acc:Q4JL84]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.