Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G044700.1 | Wheat | nucleus | 96.8 | 96.24 |
| TraesCS3B01G039100.1 | Wheat | nucleus | 97.09 | 95.16 |
| HORVU3Hr1G004050.1 | Barley | nucleus | 93.02 | 91.17 |
| GSMUA_Achr3P01370_001 | Banana | nucleus | 30.52 | 84.68 |
| GSMUA_Achr10P... | Banana | nucleus | 34.59 | 68.0 |
| CDY58599 | Canola | nucleus | 20.35 | 66.04 |
| Os01t0128000-01 | Rice | nucleus | 65.7 | 64.57 |
| GSMUA_Achr1P21020_001 | Banana | nucleus | 34.3 | 60.51 |
| Zm00001d008528_P001 | Maize | nucleus | 61.63 | 58.56 |
| Zm00001d040019_P001 | Maize | nucleus | 60.47 | 57.46 |
| EES00381 | Sorghum | nucleus | 61.92 | 54.76 |
| GSMUA_Achr8P18460_001 | Banana | nucleus | 38.95 | 53.82 |
| GSMUA_Achr11P... | Banana | nucleus | 43.9 | 47.94 |
| GSMUA_Achr6P09760_001 | Banana | nucleus | 42.73 | 47.73 |
| GSMUA_Achr2P22640_001 | Banana | nucleus | 40.12 | 47.26 |
| GSMUA_Achr3P21060_001 | Banana | nucleus | 40.41 | 45.87 |
| Solyc05g009230.1.1 | Tomato | nucleus | 35.17 | 44.16 |
| PGSC0003DMT400037716 | Potato | nucleus | 34.88 | 43.96 |
| CDY01906 | Canola | nucleus | 35.76 | 43.16 |
| CDX96033 | Canola | nucleus | 35.47 | 42.96 |
| Bra004297.1-P | Field mustard | nucleus | 35.47 | 42.96 |
| AT1G68320.1 | Thale cress | nucleus | 35.47 | 42.66 |
| CDY69488 | Canola | nucleus | 34.01 | 42.24 |
| CDY69953 | Canola | nucleus | 34.01 | 41.49 |
| Bra033948.1-P | Field mustard | nucleus | 34.3 | 41.4 |
| CDY12705 | Canola | nucleus | 34.3 | 41.4 |
| CDY54094 | Canola | nucleus | 34.3 | 41.4 |
| Bra012482.1-P | Field mustard | nucleus | 34.01 | 41.2 |
| Bra004041.1-P | Field mustard | nucleus | 33.72 | 41.13 |
| TraesCS5D01G099100.1 | Wheat | nucleus | 32.85 | 40.65 |
| PGSC0003DMT400014383 | Potato | nucleus | 32.56 | 40.29 |
| CDY03859 | Canola | nucleus | 33.43 | 40.07 |
| Solyc03g119370.1.1 | Tomato | nucleus | 32.56 | 40.0 |
| CDY42115 | Canola | nucleus | 31.98 | 39.71 |
| KRH60346 | Soybean | nucleus | 36.34 | 39.43 |
| KRH41648 | Soybean | nucleus | 35.76 | 39.42 |
| TraesCS4D01G142900.1 | Wheat | nucleus | 33.43 | 39.25 |
| CDX84981 | Canola | nucleus | 32.85 | 39.24 |
| VIT_17s0000g03560.t01 | Wine grape | nucleus | 37.21 | 39.02 |
| TraesCS3D01G223700.1 | Wheat | nucleus | 24.13 | 38.78 |
| Bra024760.1-P | Field mustard | nucleus | 29.36 | 37.97 |
| TraesCS4D01G181100.1 | Wheat | nucleus | 34.59 | 37.3 |
| TraesCS1D01G415000.1 | Wheat | nucleus | 24.42 | 36.84 |
| KRH39173 | Soybean | nucleus | 33.14 | 36.77 |
| KRH48497 | Soybean | nucleus | 32.85 | 36.33 |
| TraesCS3D01G014800.1 | Wheat | nucleus | 29.36 | 36.33 |
| TraesCS1D01G078600.1 | Wheat | nucleus | 34.01 | 36.22 |
| TraesCS3D01G413700.1 | Wheat | nucleus | 30.81 | 36.18 |
| AT1G25340.3 | Thale cress | nucleus | 31.4 | 35.06 |
| TraesCS2D01G096000.1 | Wheat | nucleus | 32.56 | 34.15 |
| TraesCS5D01G095600.1 | Wheat | nucleus | 23.26 | 33.76 |
| TraesCS4D01G339100.1 | Wheat | nucleus | 23.26 | 32.39 |
| TraesCS4D01G142300.1 | Wheat | nucleus | 21.8 | 31.51 |
| TraesCS2D01G361600.1 | Wheat | nucleus | 23.26 | 31.13 |
| TraesCS1D01G043300.1 | Wheat | nucleus | 22.67 | 30.71 |
| TraesCS6D01G207300.1 | Wheat | nucleus | 24.13 | 30.18 |
| TraesCS3D01G540600.1 | Wheat | nucleus | 21.22 | 28.52 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G036200.1 | EnsemblPlantsGene:TraesCS3D01G036200 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF510 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
| TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:-:13167709..13168833
Molecular Weight (calculated)
36905.6 Da
IEP (calculated)
6.161
GRAVY (calculated)
-0.357
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRRKGAAAG GGAGPMAMAA MEEEAAELRR GPWTLEEDNL LMSYIACHGE GRWNLLARCS GLKRTGKSCR LRWLNYLKPD IKRGNLTAEE QLVILELHAK
101: WGNRWSRIAQ HLPGRTDNEI KNYWRTRVQK QARQLKVDAN SAVFRDAVRC YWMPRLLDKM SMAAASTAAP PPLMEQHGQG VLSSSQSAAI GSDQLCCYPA
201: AGFNPSPSAS TSGSTAAAAL QPAPLPCFSE LNWEDQYCYP SGGDLDGGAG GMELDSAALL GSLGLDGLDL GPAESYLPDA TLLDYLNYSS CTANAMNMMM
301: VNGGNYNNSY CGGDAMVDGD HHDTTTAATC HAARKLAGEW GGGI
101: WGNRWSRIAQ HLPGRTDNEI KNYWRTRVQK QARQLKVDAN SAVFRDAVRC YWMPRLLDKM SMAAASTAAP PPLMEQHGQG VLSSSQSAAI GSDQLCCYPA
201: AGFNPSPSAS TSGSTAAAAL QPAPLPCFSE LNWEDQYCYP SGGDLDGGAG GMELDSAALL GSLGLDGLDL GPAESYLPDA TLLDYLNYSS CTANAMNMMM
301: VNGGNYNNSY CGGDAMVDGD HHDTTTAATC HAARKLAGEW GGGI
001: MSNITKKKCN GNEEGAEQRK GPWTLEEDTL LTNYISHNGE GRWNLLAKSS GLKRAGKSCR LRWLNYLKPD IKRGNLTPQE QLLILELHSK WGNRWSKISK
101: YLPGRTDNDI KNYWRTRVQK QARQLNIDSN SHKFIEVVRS FWFPRLINEI KDNSYTNNIK ANAPDLLGPI LRDSKDLGFN NMDCSTSMSE DLKKTSQFMD
201: FSDLETTMSL EGSRGGSSQC VSEVYSSFPC LEEEYMVAVM GSSDISALHD CHVADSKYED DVTQDLMWNM DDIWQFNEYA HFN
101: YLPGRTDNDI KNYWRTRVQK QARQLNIDSN SHKFIEVVRS FWFPRLINEI KDNSYTNNIK ANAPDLLGPI LRDSKDLGFN NMDCSTSMSE DLKKTSQFMD
201: FSDLETTMSL EGSRGGSSQC VSEVYSSFPC LEEEYMVAVM GSSDISALHD CHVADSKYED DVTQDLMWNM DDIWQFNEYA HFN
Arabidopsis Description
MYB116myb domain protein 116 [Source:TAIR;Acc:AT1G25340]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.