Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH48497 | Soybean | nucleus | 85.16 | 84.89 |
| GSMUA_Achr3P01370_001 | Banana | nucleus | 29.68 | 74.19 |
| KRG94092 | Soybean | nucleus | 18.71 | 65.17 |
| GSMUA_Achr10P... | Banana | nucleus | 31.29 | 55.43 |
| KRH55348 | Soybean | nucleus | 21.61 | 54.03 |
| KRH33348 | Soybean | nucleus | 17.74 | 53.92 |
| KRH62917 | Soybean | nucleus | 18.06 | 53.85 |
| KRH11843 | Soybean | nucleus | 21.29 | 53.23 |
| GSMUA_Achr1P21020_001 | Banana | nucleus | 31.29 | 49.74 |
| KRH75688 | Soybean | nucleus | 16.77 | 48.15 |
| KRH18107 | Soybean | nucleus | 18.39 | 45.24 |
| KRH41648 | Soybean | nucleus | 43.55 | 43.27 |
| KRG93265 | Soybean | nucleus | 28.39 | 42.93 |
| KRH07188 | Soybean | nucleus | 28.71 | 42.79 |
| KRH56587 | Soybean | nucleus | 28.39 | 42.72 |
| KRH60346 | Soybean | nucleus | 43.55 | 42.59 |
| KRG94086 | Soybean | nucleus | 28.06 | 42.23 |
| GSMUA_Achr8P18460_001 | Banana | nucleus | 33.23 | 41.37 |
| KRH31759 | Soybean | nucleus | 30.0 | 39.41 |
| KRH68299 | Soybean | nucleus | 29.68 | 38.82 |
| GSMUA_Achr2P22640_001 | Banana | nucleus | 35.16 | 37.33 |
| GSMUA_Achr6P09760_001 | Banana | nucleus | 36.77 | 37.01 |
| KRG96561 | Soybean | nucleus | 30.97 | 36.92 |
| KRH35934 | Soybean | nucleus | 36.45 | 36.69 |
| KRG90844 | Soybean | nucleus | 36.13 | 36.48 |
| VIT_17s0000g03560.t01 | Wine grape | nucleus | 38.39 | 36.28 |
| KRH69178 | Soybean | nucleus | 29.68 | 35.38 |
| KRG96563 | Soybean | nucleus | 27.1 | 35.29 |
| GSMUA_Achr3P21060_001 | Banana | nucleus | 34.19 | 34.98 |
| GSMUA_Achr11P... | Banana | nucleus | 35.16 | 34.6 |
| KRH02414 | Soybean | nucleus | 35.81 | 34.47 |
| KRH10298 | Soybean | nucleus | 27.42 | 33.33 |
| TraesCS3D01G036200.1 | Wheat | nucleus | 36.77 | 33.14 |
| KRH68301 | Soybean | nucleus | 28.39 | 33.08 |
| TraesCS3A01G044700.1 | Wheat | nucleus | 36.77 | 32.95 |
| KRH36928 | Soybean | nucleus | 36.13 | 32.94 |
| KRH50671 | Soybean | nucleus | 34.52 | 32.92 |
| Zm00001d040019_P001 | Maize | nucleus | 38.06 | 32.6 |
| KRG97314 | Soybean | nucleus | 35.81 | 32.55 |
| HORVU3Hr1G004050.1 | Barley | nucleus | 36.77 | 32.48 |
| TraesCS3B01G039100.1 | Wheat | nucleus | 36.77 | 32.48 |
| KRH31760 | Soybean | nucleus | 29.35 | 32.27 |
| Zm00001d008528_P001 | Maize | nucleus | 37.42 | 32.04 |
| Os01t0128000-01 | Rice | nucleus | 36.13 | 32.0 |
| KRH23019 | Soybean | nucleus | 26.77 | 31.44 |
| KRH49797 | Soybean | nucleus | 14.52 | 31.03 |
| KRH19953 | Soybean | nucleus | 22.9 | 31.0 |
| KRG92245 | Soybean | nucleus | 25.16 | 30.71 |
| EES00381 | Sorghum | nucleus | 38.39 | 30.59 |
| KRH29850 | Soybean | nucleus | 26.13 | 30.45 |
| KRH24842 | Soybean | nucleus | 26.13 | 30.45 |
| KRH32555 | Soybean | nucleus | 22.58 | 30.17 |
| KRH34553 | Soybean | nucleus | 25.81 | 30.08 |
| KRH04452 | Soybean | nucleus | 25.48 | 29.81 |
| KRG90311 | Soybean | nucleus | 24.84 | 29.62 |
| KRH01379 | Soybean | nucleus | 23.23 | 27.91 |
| KRH01378 | Soybean | nucleus | 23.55 | 26.16 |
| KRH45095 | Soybean | nucleus | 22.58 | 25.45 |
| KRH33568 | Soybean | nucleus | 25.81 | 25.0 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100778425 | MapMan:15.5.2.1 | EMBL:ACUP02005921 | EnsemblPlantsGene:GLYMA_09G183400 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | InterPro:Homeobox-like_sf | UniProt:I1L4B8 | InterPro:IPR017930 | EnsemblPlants:KRH39173 | ProteinID:KRH39173 |
| ProteinID:KRH39173.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF510 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0002338E82 | : | : |
Description
hypothetical protein
Coordinates
chr9:-:40847123..40848705
Molecular Weight (calculated)
35711.1 Da
IEP (calculated)
7.203
GRAVY (calculated)
-0.657
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MRLAMSTPSK SIICSREDDY ELRRGPWSVE EDDLLISYIA NNGEGRWNLL AIRSGLRRTG KSCRLRWLNY LKPNVKRGNL TSEEQLLIFE LHSKWGNRWS
101: KIAHQLPGRT DNEIKNYWRT RIQKRAKYLK FEAHRKSRFV EFVKGLQMTR YLHKAQESSP SAMSIQDQAI PLPFDGVTIP HYSSFGIGTT PTTQITCQGG
201: LNHLNQQDQN SESEHNNGSC ISSSESANIP YMSQPLGHTT SQFQALDNCD FGICSYDGYS IDNNSYDMDA LNLTTTMVAE NLELPVFDVQ ISEPYFMNMD
301: ELWQFRNIQR
101: KIAHQLPGRT DNEIKNYWRT RIQKRAKYLK FEAHRKSRFV EFVKGLQMTR YLHKAQESSP SAMSIQDQAI PLPFDGVTIP HYSSFGIGTT PTTQITCQGG
201: LNHLNQQDQN SESEHNNGSC ISSSESANIP YMSQPLGHTT SQFQALDNCD FGICSYDGYS IDNNSYDMDA LNLTTTMVAE NLELPVFDVQ ISEPYFMNMD
301: ELWQFRNIQR
001: MSNITKKKCN GNEEGAEQRK GPWTLEEDTL LTNYISHNGE GRWNLLAKSS GLKRAGKSCR LRWLNYLKPD IKRGNLTPQE QLLILELHSK WGNRWSKISK
101: YLPGRTDNDI KNYWRTRVQK QARQLNIDSN SHKFIEVVRS FWFPRLINEI KDNSYTNNIK ANAPDLLGPI LRDSKDLGFN NMDCSTSMSE DLKKTSQFMD
201: FSDLETTMSL EGSRGGSSQC VSEVYSSFPC LEEEYMVAVM GSSDISALHD CHVADSKYED DVTQDLMWNM DDIWQFNEYA HFN
101: YLPGRTDNDI KNYWRTRVQK QARQLNIDSN SHKFIEVVRS FWFPRLINEI KDNSYTNNIK ANAPDLLGPI LRDSKDLGFN NMDCSTSMSE DLKKTSQFMD
201: FSDLETTMSL EGSRGGSSQC VSEVYSSFPC LEEEYMVAVM GSSDISALHD CHVADSKYED DVTQDLMWNM DDIWQFNEYA HFN
Arabidopsis Description
MYB116myb domain protein 116 [Source:TAIR;Acc:AT1G25340]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.