Factsheet for Os01t0128000-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P01370_001	Banana	nucleus	30.29	85.48
GSMUA_Achr10P...	Banana	nucleus	34.86	69.71
GSMUA_Achr1P21020_001	Banana	nucleus	36.86	66.15
CDY58599	Canola	nucleus	20.0	66.04
TraesCS3D01G036200.1	Wheat	nucleus	64.57	65.7
TraesCS3A01G044700.1	Wheat	nucleus	64.57	65.32
TraesCS3B01G039100.1	Wheat	nucleus	64.57	64.39
HORVU3Hr1G004050.1	Barley	nucleus	64.0	63.82
Zm00001d008528_P001	Maize	nucleus	65.43	63.26
Zm00001d040019_P001	Maize	nucleus	61.71	59.67
EES00381	Sorghum	nucleus	66.29	59.64
GSMUA_Achr8P18460_001	Banana	nucleus	41.71	58.63
GSMUA_Achr6P09760_001	Banana	nucleus	45.71	51.95
GSMUA_Achr2P22640_001	Banana	nucleus	43.14	51.71
GSMUA_Achr11P...	Banana	nucleus	45.43	50.48
GSMUA_Achr3P21060_001	Banana	nucleus	41.14	47.52
PGSC0003DMT400037716	Potato	nucleus	36.86	47.25
Solyc05g009230.1.1	Tomato	nucleus	36.57	46.72
Bra004297.1-P	Field mustard	nucleus	36.29	44.72
CDX96033	Canola	nucleus	36.29	44.72
AT1G68320.1	Thale cress	nucleus	36.29	44.41
CDY01906	Canola	nucleus	36.0	44.21
CDY69488	Canola	nucleus	34.86	44.04
Bra033948.1-P	Field mustard	nucleus	35.71	43.86
CDY12705	Canola	nucleus	35.43	43.51
CDY69953	Canola	nucleus	34.86	43.26
Bra004041.1-P	Field mustard	nucleus	34.57	42.91
CDY54094	Canola	nucleus	34.86	42.81
Bra012482.1-P	Field mustard	nucleus	34.0	41.9
PGSC0003DMT400014383	Potato	nucleus	33.14	41.73
Solyc03g119370.1.1	Tomato	nucleus	33.14	41.43
CDY42115	Canola	nucleus	32.57	41.16
CDY03859	Canola	nucleus	33.71	41.12
Os11t0684000-01	Rice	nucleus	33.14	40.7
CDX84981	Canola	nucleus	33.43	40.62
VIT_17s0000g03560.t01	Wine grape	nucleus	38.0	40.55
KRH41648	Soybean	nucleus	36.0	40.38
KRH60346	Soybean	nucleus	36.0	39.75
Bra024760.1-P	Field mustard	nucleus	30.0	39.47
Os07t0688200-01	Rice	nucleus	33.71	39.33
Os01t0298400-01	Rice	extracellular, nucleus	32.57	38.91
Os03t0315400-01	Rice	nucleus	35.71	37.99
KRH48497	Soybean	nucleus	32.57	36.66
KRH39173	Soybean	nucleus	32.0	36.13
AT1G25340.3	Thale cress	nucleus	31.14	35.39
Os12t0567300-00	Rice	nucleus	23.43	33.88
Os01t0637800-00	Rice	mitochondrion, nucleus, plastid	26.57	33.45
Os11t0700500-01	Rice	nucleus	22.0	32.49
Os03t0142600-00	Rice	nucleus	22.86	32.39
Os04t0508500-01	Rice	nucleus	25.14	31.32
Os02t0618400-02	Rice	nucleus	24.86	30.1
Os01t0975300-01	Rice	vacuole	16.86	28.1
Os05t0132700-01	Rice	nucleus	16.86	27.44

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:4325992	ProteinID:BAF03822.1	ProteinID:BAS70191.1	ProteinID:EEE53799.1
GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154
GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	EnsemblPlantsGene:Os01g0128000
EnsemblPlants:Os01t0128000-01	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF510	UniProt:Q0JR06
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0000DD893E	RefSeq:XP_015633684.1	SEG:seg

Description

Myb transcription factor domain containing protein. (Os01t0128000-01)

Coordinates

chr1:-:1549241..1551011

Molecular Weight (calculated)

38490.4 Da

IEP (calculated)

6.504

GRAVY (calculated)

-0.486

Length

350 amino acids

Sequence
(BLAST)

001: MSQRRVAGPM GVMSKQQQEA MAEEMMELRR GPWTLEEDNL LMNYIACHGE GRWNLLARCS GLKRTGKSCR LRWLNYLKPD IKRGNLTPEE QLLILELHSR
101: WGNRWSRIAQ HLPGRTDNEI KNYWRTRVQK QARQLKVDAN STVFRDAVRC YWMPRLLEKM AGAATDPTPP PPPPLHHHAA MATASSSPFD FDTHLQQAEA
201: ATACVVPNNV YHHHIDPSPS TSTSAGSTAA AAAFQPLPCF SELRWDQQMQ SSGELDDGAA GVFVDSASAL GSLSLDGLDL GPAEYYSDST LLDYLNSSCT
301: GSAMMTMMTA SGNAGSYNYC GGAMDGGDTW RSDEVCQAAA RKLGEWGGGI

Best Arabidopsis Sequence Match ( AT1G68320.1 )
(BLAST)

001: MENSMKKKKS FKESEDEELR RGPWTLEEDT LLTNYILHNG EGRWNHVAKC AGLKRTGKSC RLRWLNYLKP DIRRGNLTPQ EQLLILELHS KWGNRWSKIA
101: QYLPGRTDNE IKNYWRTRVQ KQARQLNIES NSDKFFDAVR SFWVPRLIEK MEQNSSTTTT YCCPQNNNNN SLLLPSQSHD SLSMQKDIDY SGFSNIDGSS
201: STSTCMSHLT TVPHFMDQSN TNIIDGSMCF HEGNVQEFGG YVPGMEDYMV NSDISMECHV ADGYSAYEDV TQDPMWNVDD IWQFRE

Arabidopsis Description

MYB62Transcription factor MYB62 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9G7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.