Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P01370_001 | Banana | nucleus | 35.97 | 87.9 |
| GSMUA_Achr10P... | Banana | nucleus | 42.24 | 73.14 |
| GSMUA_Achr1P21020_001 | Banana | nucleus | 45.54 | 70.77 |
| GSMUA_Achr4P19990_001 | Banana | nucleus | 28.71 | 67.97 |
| GSMUA_Achr8P18460_001 | Banana | nucleus | 54.13 | 65.86 |
| CDY58599 | Canola | nucleus | 22.77 | 65.09 |
| GSMUA_Achr2P22640_001 | Banana | nucleus | 60.07 | 62.33 |
| GSMUA_Achr5P21090_001 | Banana | nucleus | 33.99 | 56.59 |
| GSMUA_Achr6P09760_001 | Banana | nucleus | 54.79 | 53.9 |
| GSMUA_Achr3P12730_001 | Banana | nucleus | 29.7 | 51.43 |
| GSMUA_Achr11P... | Banana | nucleus | 51.49 | 49.52 |
| Solyc05g009230.1.1 | Tomato | nucleus | 41.58 | 45.99 |
| PGSC0003DMT400037716 | Potato | nucleus | 41.25 | 45.79 |
| GSMUA_Achr8P10800_001 | Banana | nucleus | 37.95 | 44.92 |
| GSMUA_Achr6P27290_001 | Banana | nucleus | 28.38 | 44.1 |
| GSMUA_Achr11P... | Banana | nucleus | 38.28 | 43.94 |
| GSMUA_Achr11P... | Banana | nucleus | 37.95 | 43.89 |
| CDY69488 | Canola | nucleus | 39.93 | 43.68 |
| Solyc03g119370.1.1 | Tomato | nucleus | 40.26 | 43.57 |
| GSMUA_Achr9P16640_001 | Banana | nucleus | 37.29 | 43.46 |
| CDX96033 | Canola | nucleus | 40.59 | 43.31 |
| Bra004297.1-P | Field mustard | nucleus | 40.59 | 43.31 |
| GSMUA_AchrUn_... | Banana | nucleus | 37.95 | 43.07 |
| VIT_17s0000g03560.t01 | Wine grape | nucleus | 46.53 | 42.99 |
| CDY69953 | Canola | nucleus | 39.93 | 42.91 |
| GSMUA_Achr1P27270_001 | Banana | nucleus | 27.72 | 42.86 |
| CDY01906 | Canola | nucleus | 40.26 | 42.81 |
| PGSC0003DMT400014383 | Potato | nucleus | 39.27 | 42.81 |
| CDY12705 | Canola | nucleus | 39.93 | 42.46 |
| Bra033948.1-P | Field mustard | nucleus | 39.93 | 42.46 |
| Bra004041.1-P | Field mustard | nucleus | 39.27 | 42.2 |
| CDY54094 | Canola | nucleus | 39.6 | 42.11 |
| AT1G68320.1 | Thale cress | nucleus | 39.6 | 41.96 |
| Bra012482.1-P | Field mustard | nucleus | 38.94 | 41.55 |
| GSMUA_Achr1P24960_001 | Banana | nucleus | 36.96 | 41.48 |
| GSMUA_Achr8P29910_001 | Banana | nucleus | 36.63 | 41.26 |
| CDY42115 | Canola | nucleus | 37.62 | 41.16 |
| Os01t0128000-01 | Rice | nucleus | 47.52 | 41.14 |
| CDY03859 | Canola | nucleus | 38.94 | 41.12 |
| CDX84981 | Canola | nucleus | 38.61 | 40.62 |
| TraesCS3D01G036200.1 | Wheat | nucleus | 45.87 | 40.41 |
| KRH41648 | Soybean | nucleus | 41.58 | 40.38 |
| Zm00001d008528_P001 | Maize | nucleus | 48.18 | 40.33 |
| TraesCS3A01G044700.1 | Wheat | nucleus | 45.87 | 40.17 |
| Zm00001d040019_P001 | Maize | nucleus | 47.85 | 40.06 |
| TraesCS3B01G039100.1 | Wheat | nucleus | 45.87 | 39.6 |
| Bra024760.1-P | Field mustard | nucleus | 34.65 | 39.47 |
| KRH60346 | Soybean | nucleus | 41.25 | 39.43 |
| EES00381 | Sorghum | nucleus | 50.49 | 39.33 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.97 | 38.79 |
| HORVU3Hr1G004050.1 | Barley | nucleus | 44.88 | 38.75 |
| GSMUA_AchrUn_... | Banana | nucleus | 34.32 | 37.82 |
| GSMUA_Achr7P05570_001 | Banana | nucleus | 33.66 | 37.5 |
| GSMUA_Achr2P16200_001 | Banana | nucleus | 25.08 | 37.07 |
| GSMUA_Achr9P28370_001 | Banana | nucleus | 25.74 | 36.45 |
| AT1G25340.3 | Thale cress | nucleus | 36.96 | 36.36 |
| GSMUA_Achr10P... | Banana | nucleus | 25.41 | 36.32 |
| GSMUA_Achr11P... | Banana | nucleus | 25.41 | 36.15 |
| KRH48497 | Soybean | nucleus | 36.96 | 36.01 |
| GSMUA_Achr6P15370_001 | Banana | nucleus | 24.75 | 35.89 |
| GSMUA_Achr3P08370_001 | Banana | nucleus | 33.66 | 35.54 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 23.76 | 35.29 |
| GSMUA_Achr11P... | Banana | nucleus | 26.73 | 35.22 |
| GSMUA_Achr10P... | Banana | nucleus | 26.07 | 34.96 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 26.07 | 34.2 |
| KRH39173 | Soybean | nucleus | 34.98 | 34.19 |
| GSMUA_Achr11P... | Banana | nucleus | 37.62 | 33.14 |
| GSMUA_Achr10P... | Banana | nucleus | 25.74 | 33.05 |
| GSMUA_Achr8P02640_001 | Banana | nucleus | 25.74 | 33.05 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 26.07 | 32.51 |
| GSMUA_Achr5P28350_001 | Banana | nucleus | 25.41 | 32.49 |
| GSMUA_Achr11P... | Banana | nucleus | 25.74 | 32.37 |
| GSMUA_Achr7P18200_001 | Banana | nucleus | 24.75 | 31.12 |
| GSMUA_Achr8P34340_001 | Banana | nucleus | 23.43 | 28.98 |
| GSMUA_Achr9P07000_001 | Banana | nucleus | 32.34 | 7.8 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| EnsemblPlantsGene:GSMUA_Achr3G21060_001 | EnsemblPlants:GSMUA_Achr3P21060_001 | EnsemblPlants:GSMUA_Achr3T21060_001 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M0SGH2 |
| InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF510 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000295B912 | SEG:seg | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G21060_001]
Coordinates
chr3:+:22092435..22093556
Molecular Weight (calculated)
34200.8 Da
IEP (calculated)
6.311
GRAVY (calculated)
-0.676
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDKRGSSGK HEEMELRRGP WTLEEDTLLM HYITCHGEGR WNLLAKCSGL KRTGKSCRLR WLNYLKPDVK RGNLSPEEQL LILELHSKWG NRWSRIAQHL
101: PGRTDNEIKN YWRTRVQKQA RQLKVDPNSS MFRDALQCYW TPRLREQIIG SSQTLRSVDA NANTTTATDE AHRVLQSCGS YELPEPESRS LSTSSCSVVL
201: SQLPVDLSDF PSGPSDELSG VTFDPFSSVC SINDFYDLDT WDIAPVSASA PSHSASDHSN NVGDSLWSMD DLYDMSKTYE SAAETKVPFA DNSQVVKYIS
301: PSK
101: PGRTDNEIKN YWRTRVQKQA RQLKVDPNSS MFRDALQCYW TPRLREQIIG SSQTLRSVDA NANTTTATDE AHRVLQSCGS YELPEPESRS LSTSSCSVVL
201: SQLPVDLSDF PSGPSDELSG VTFDPFSSVC SINDFYDLDT WDIAPVSASA PSHSASDHSN NVGDSLWSMD DLYDMSKTYE SAAETKVPFA DNSQVVKYIS
301: PSK
001: MENSMKKKKS FKESEDEELR RGPWTLEEDT LLTNYILHNG EGRWNHVAKC AGLKRTGKSC RLRWLNYLKP DIRRGNLTPQ EQLLILELHS KWGNRWSKIA
101: QYLPGRTDNE IKNYWRTRVQ KQARQLNIES NSDKFFDAVR SFWVPRLIEK MEQNSSTTTT YCCPQNNNNN SLLLPSQSHD SLSMQKDIDY SGFSNIDGSS
201: STSTCMSHLT TVPHFMDQSN TNIIDGSMCF HEGNVQEFGG YVPGMEDYMV NSDISMECHV ADGYSAYEDV TQDPMWNVDD IWQFRE
101: QYLPGRTDNE IKNYWRTRVQ KQARQLNIES NSDKFFDAVR SFWVPRLIEK MEQNSSTTTT YCCPQNNNNN SLLLPSQSHD SLSMQKDIDY SGFSNIDGSS
201: STSTCMSHLT TVPHFMDQSN TNIIDGSMCF HEGNVQEFGG YVPGMEDYMV NSDISMECHV ADGYSAYEDV TQDPMWNVDD IWQFRE
Arabidopsis Description
MYB62Transcription factor MYB62 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9G7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.