Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 83.25 | 73.73 |
| GSMUA_Achr2P16200_001 | Banana | nucleus | 61.72 | 62.93 |
| GSMUA_Achr9P28370_001 | Banana | nucleus | 56.46 | 55.14 |
| GSMUA_Achr10P... | Banana | nucleus | 59.33 | 54.87 |
| GSMUA_Achr5P28350_001 | Banana | nucleus | 62.2 | 54.85 |
| GSMUA_Achr3P01370_001 | Banana | nucleus | 32.54 | 54.84 |
| GSMUA_Achr7P18200_001 | Banana | nucleus | 61.72 | 53.53 |
| GSMUA_Achr11P... | Banana | nucleus | 60.77 | 52.7 |
| GSMUA_Achr10P... | Banana | nucleus | 53.11 | 52.36 |
| GSMUA_Achr4P19990_001 | Banana | nucleus | 31.58 | 51.56 |
| AT5G59780.3 | Thale cress | nucleus | 57.89 | 51.49 |
| PGSC0003DMT400040149 | Potato | nucleus | 53.59 | 51.38 |
| Solyc11g073120.1.1 | Tomato | nucleus | 53.11 | 51.15 |
| CDX71075 | Canola | nucleus | 57.42 | 49.79 |
| Bra006694.1-P | Field mustard | nucleus | 57.42 | 49.59 |
| CDY70097 | Canola | nucleus | 55.98 | 49.58 |
| Bra020289.1-P | Field mustard | nucleus | 55.98 | 49.58 |
| CDY49581 | Canola | nucleus | 55.98 | 49.37 |
| Bra002533.1-P | Field mustard | nucleus | 55.98 | 49.37 |
| VIT_06s0004g04140.t01 | Wine grape | nucleus | 60.29 | 49.22 |
| CDX88722 | Canola | nucleus | 56.94 | 49.17 |
| CDX80230 | Canola | nucleus | 55.02 | 48.52 |
| Solyc06g005330.2.1 | Tomato | nucleus | 54.55 | 48.31 |
| GSMUA_Achr8P34340_001 | Banana | nucleus | 56.46 | 48.16 |
| GSMUA_Achr8P02640_001 | Banana | nucleus | 54.07 | 47.88 |
| TraesCS1D01G043300.1 | Wheat | nucleus | 57.42 | 47.24 |
| Bra018223.1-P | Field mustard | nucleus | 56.46 | 46.83 |
| KRH10298 | Soybean | nucleus | 55.98 | 45.88 |
| AT3G46130.1 | Thale cress | nucleus | 55.98 | 45.35 |
| KRH29850 | Soybean | nucleus | 57.42 | 45.11 |
| TraesCS1B01G055200.1 | Wheat | nucleus | 57.42 | 44.78 |
| KRH23019 | Soybean | nucleus | 55.98 | 44.32 |
| TraesCS1A01G042700.1 | Wheat | nucleus | 55.5 | 44.11 |
| KRH24842 | Soybean | nucleus | 55.5 | 43.61 |
| HORVU1Hr1G008810.3 | Barley | nucleus | 53.59 | 43.41 |
| CDX99125 | Canola | nucleus | 56.46 | 42.45 |
| CDX86041 | Canola | nucleus | 56.46 | 42.45 |
| CDX86040 | Canola | nucleus | 56.46 | 42.45 |
| TraesCS3D01G540600.1 | Wheat | nucleus | 49.28 | 40.23 |
| TraesCS3A01G535100.1 | Wheat | nucleus | 49.28 | 39.62 |
| TraesCS3B01G612200.2 | Wheat | nucleus | 49.28 | 39.02 |
| GSMUA_Achr10P... | Banana | nucleus | 32.06 | 38.29 |
| GSMUA_Achr6P27290_001 | Banana | nucleus | 35.41 | 37.95 |
| GSMUA_Achr5P21090_001 | Banana | nucleus | 33.01 | 37.91 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 36.84 | 37.75 |
| GSMUA_Achr3P12730_001 | Banana | nucleus | 31.58 | 37.71 |
| Os01t0975300-01 | Rice | vacuole | 37.8 | 37.62 |
| GSMUA_Achr1P21020_001 | Banana | nucleus | 34.45 | 36.92 |
| GSMUA_Achr11P... | Banana | nucleus | 37.32 | 36.62 |
| GSMUA_Achr1P27270_001 | Banana | nucleus | 33.49 | 35.71 |
| GSMUA_Achr11P... | Banana | nucleus | 39.23 | 35.65 |
| OQU77249 | Sorghum | nucleus | 52.15 | 35.39 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 36.36 | 32.9 |
| Zm00001d035605_P001 | Maize | nucleus | 50.24 | 32.11 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 36.84 | 31.69 |
| EES17592 | Sorghum | nucleus | 49.76 | 31.14 |
| GSMUA_Achr7P05570_001 | Banana | nucleus | 38.76 | 29.78 |
| GSMUA_Achr8P18460_001 | Banana | nucleus | 35.41 | 29.72 |
| Zm00001d035604_P001 | Maize | nucleus | 51.67 | 29.35 |
| GSMUA_Achr8P10800_001 | Banana | nucleus | 35.89 | 29.3 |
| GSMUA_Achr1P24960_001 | Banana | nucleus | 37.8 | 29.26 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.28 | 29.09 |
| GSMUA_Achr11P... | Banana | nucleus | 36.36 | 28.79 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.36 | 28.46 |
| GSMUA_Achr9P16640_001 | Banana | nucleus | 34.93 | 28.08 |
| GSMUA_Achr11P... | Banana | nucleus | 34.45 | 27.48 |
| GSMUA_Achr2P22640_001 | Banana | nucleus | 37.32 | 26.71 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.89 | 26.69 |
| GSMUA_Achr8P29910_001 | Banana | nucleus | 33.97 | 26.39 |
| GSMUA_Achr3P08370_001 | Banana | nucleus | 34.45 | 25.09 |
| GSMUA_Achr3P21060_001 | Banana | nucleus | 35.89 | 24.75 |
| GSMUA_Achr11P... | Banana | nucleus | 36.84 | 24.44 |
| GSMUA_Achr6P09760_001 | Banana | nucleus | 35.41 | 24.03 |
| GSMUA_Achr11P... | Banana | nucleus | 34.93 | 21.22 |
| GSMUA_Achr9P07000_001 | Banana | nucleus | 40.19 | 6.68 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| EnsemblPlantsGene:GSMUA_Achr6G15370_001 | EnsemblPlants:GSMUA_Achr6P15370_001 | EnsemblPlants:GSMUA_Achr6T15370_001 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M0T785 |
| InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF484 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000295FB5A | SEG:seg | : | : |
Description
Transcription factor MYB59 [Source:GMGC_GENE;Acc:GSMUA_Achr6G15370_001]
Coordinates
chr6:+:10243787..10244674
Molecular Weight (calculated)
24148.3 Da
IEP (calculated)
8.333
GRAVY (calculated)
-0.942
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRKGPWTEQ EDLQLVWFVR LLGERRWDFL AKVSGLNRSG KSCRLRWVNY LHPGLKRGRM TPQEEDLVVE LHAKWGNRWS RIARRLPGRT DNEIKNYWRT
101: HMRKKAQERR TCSSPSPSSS SSSNGPPSEL RVEKHDGDSV AEGSAFTSGL ELTDDEVKGY TMDQIWNEIA ASESCNMECP PTSSSIWEDK SESLWRLDED
201: LRISNPPRV
101: HMRKKAQERR TCSSPSPSSS SSSNGPPSEL RVEKHDGDSV AEGSAFTSGL ELTDDEVKGY TMDQIWNEIA ASESCNMECP PTSSSIWEDK SESLWRLDED
201: LRISNPPRV
001: MKMMQEEGNR KGPWTEQEDI LLVNFVHLFG DRRWDFIAKV SGLNRTGKSC RLRWVNYLHP GLKRGKMTPQ EERLVLELHA KWGNRWSKIA RKLPGRTDNE
101: IKNYWRTHMR KKAQEKKRPV SPTSSFSNCS SSSVTTTTTN TQDTSCHSRK SSGEVSFYDT GGSRSTREMN QENEDVYSLD DIWREIDHSA VNIIKPVKDI
201: YSEQSHCLSY PNLASPSWES SLDSIWNMDA DKSKISSYFA NDQFPFCFQH SRSPWSSG
101: IKNYWRTHMR KKAQEKKRPV SPTSSFSNCS SSSVTTTTTN TQDTSCHSRK SSGEVSFYDT GGSRSTREMN QENEDVYSLD DIWREIDHSA VNIIKPVKDI
201: YSEQSHCLSY PNLASPSWES SLDSIWNMDA DKSKISSYFA NDQFPFCFQH SRSPWSSG
Arabidopsis Description
ATMYB48myb domain protein 48 [Source:TAIR;Acc:AT3G46130]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.