Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P15370_001 | Banana | nucleus | 54.85 | 62.2 |
| GSMUA_Achr10P... | Banana | nucleus | 58.65 | 58.9 |
| GSMUA_Achr11P... | Banana | nucleus | 59.07 | 58.09 |
| GSMUA_Achr2P16200_001 | Banana | nucleus | 49.79 | 57.56 |
| GSMUA_Achr3P01370_001 | Banana | nucleus | 29.96 | 57.26 |
| GSMUA_Achr9P28370_001 | Banana | nucleus | 50.21 | 55.61 |
| GSMUA_Achr10P... | Banana | nucleus | 51.48 | 53.98 |
| GSMUA_Achr10P... | Banana | nucleus | 48.1 | 53.77 |
| PGSC0003DMT400040149 | Potato | nucleus | 48.95 | 53.21 |
| Solyc11g073120.1.1 | Tomato | nucleus | 48.52 | 53.0 |
| GSMUA_Achr4P19990_001 | Banana | nucleus | 28.27 | 52.34 |
| AT5G59780.3 | Thale cress | nucleus | 51.9 | 52.34 |
| GSMUA_Achr7P18200_001 | Banana | nucleus | 53.16 | 52.28 |
| CDY70097 | Canola | nucleus | 51.05 | 51.27 |
| Bra020289.1-P | Field mustard | nucleus | 51.05 | 51.27 |
| CDX71075 | Canola | nucleus | 51.9 | 51.04 |
| Bra006694.1-P | Field mustard | nucleus | 51.9 | 50.83 |
| CDY49581 | Canola | nucleus | 50.63 | 50.63 |
| Bra002533.1-P | Field mustard | nucleus | 50.63 | 50.63 |
| CDX88722 | Canola | nucleus | 51.48 | 50.41 |
| CDX80230 | Canola | nucleus | 50.21 | 50.21 |
| Solyc06g005330.2.1 | Tomato | nucleus | 49.79 | 50.0 |
| GSMUA_Achr8P02640_001 | Banana | nucleus | 48.95 | 49.15 |
| GSMUA_Achr8P34340_001 | Banana | nucleus | 50.63 | 48.98 |
| VIT_06s0004g04140.t01 | Wine grape | nucleus | 51.9 | 48.05 |
| Bra018223.1-P | Field mustard | nucleus | 50.63 | 47.62 |
| AT3G46130.1 | Thale cress | nucleus | 50.63 | 46.51 |
| KRH10298 | Soybean | nucleus | 48.95 | 45.49 |
| TraesCS1D01G043300.1 | Wheat | nucleus | 47.26 | 44.09 |
| KRH23019 | Soybean | nucleus | 48.95 | 43.94 |
| KRH29850 | Soybean | nucleus | 48.95 | 43.61 |
| KRH24842 | Soybean | nucleus | 48.95 | 43.61 |
| CDX86041 | Canola | nucleus | 50.63 | 43.17 |
| CDX99125 | Canola | nucleus | 50.63 | 43.17 |
| CDX86040 | Canola | nucleus | 50.21 | 42.81 |
| TraesCS1B01G055200.1 | Wheat | nucleus | 47.68 | 42.16 |
| HORVU1Hr1G008810.3 | Barley | nucleus | 45.15 | 41.47 |
| TraesCS1A01G042700.1 | Wheat | nucleus | 45.99 | 41.44 |
| GSMUA_Achr5P21090_001 | Banana | nucleus | 31.65 | 41.21 |
| GSMUA_Achr3P12730_001 | Banana | nucleus | 29.96 | 40.57 |
| GSMUA_Achr10P... | Banana | nucleus | 29.96 | 40.57 |
| GSMUA_Achr1P27270_001 | Banana | nucleus | 31.65 | 38.27 |
| TraesCS3D01G540600.1 | Wheat | nucleus | 40.93 | 37.89 |
| TraesCS3A01G535100.1 | Wheat | nucleus | 41.35 | 37.69 |
| GSMUA_Achr6P27290_001 | Banana | nucleus | 30.8 | 37.44 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 32.07 | 37.25 |
| TraesCS3B01G612200.2 | Wheat | nucleus | 41.35 | 37.12 |
| GSMUA_Achr1P21020_001 | Banana | nucleus | 29.54 | 35.9 |
| Os01t0975300-01 | Rice | vacuole | 31.65 | 35.71 |
| OQU77249 | Sorghum | nucleus | 45.57 | 35.06 |
| GSMUA_Achr11P... | Banana | nucleus | 30.38 | 33.8 |
| GSMUA_Achr11P... | Banana | nucleus | 31.65 | 32.61 |
| Zm00001d035605_P001 | Maize | nucleus | 44.73 | 32.42 |
| GSMUA_Achr1P24960_001 | Banana | nucleus | 36.29 | 31.85 |
| EES17592 | Sorghum | nucleus | 44.73 | 31.74 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 32.07 | 31.28 |
| GSMUA_Achr8P10800_001 | Banana | nucleus | 33.76 | 31.25 |
| GSMUA_AchrUn_... | Banana | nucleus | 34.6 | 30.71 |
| GSMUA_Achr7P05570_001 | Banana | nucleus | 35.02 | 30.51 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 29.54 | 30.3 |
| GSMUA_Achr11P... | Banana | nucleus | 33.76 | 30.3 |
| GSMUA_Achr8P18460_001 | Banana | nucleus | 31.65 | 30.12 |
| GSMUA_Achr9P16640_001 | Banana | nucleus | 32.91 | 30.0 |
| GSMUA_Achr11P... | Banana | nucleus | 32.91 | 29.77 |
| Zm00001d035604_P001 | Maize | nucleus | 45.99 | 29.62 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.76 | 29.09 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.76 | 28.47 |
| GSMUA_Achr8P29910_001 | Banana | nucleus | 32.07 | 28.25 |
| GSMUA_Achr2P22640_001 | Banana | nucleus | 32.07 | 26.03 |
| GSMUA_Achr3P08370_001 | Banana | nucleus | 31.22 | 25.78 |
| GSMUA_Achr3P21060_001 | Banana | nucleus | 32.49 | 25.41 |
| GSMUA_Achr6P09760_001 | Banana | nucleus | 32.49 | 25.0 |
| GSMUA_Achr11P... | Banana | nucleus | 32.49 | 24.44 |
| GSMUA_Achr11P... | Banana | nucleus | 32.49 | 22.38 |
| GSMUA_Achr9P07000_001 | Banana | nucleus | 35.44 | 6.68 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P28350_001 | EnsemblPlants:GSMUA_Achr5T28350_001 | EnsemblPlantsGene:GSMUA_Achr5G28350_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF484 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI0002969220 | UniProt:M0T2F9 | MapMan:15.5.2.1 | : | : |
Description
Myb-related protein MYBAS1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G28350_001]
Coordinates
chr5:+:28589027..28589926
Molecular Weight (calculated)
26860.7 Da
IEP (calculated)
8.107
GRAVY (calculated)
-0.735
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAKNEETRK GPWMEQEDLQ LVRFVRLFGE RRWDYLAKVS GLNRSGKSCR LRWVNYLHPG LRHGRMTPEE EHLVLELHAK WGNRWSRIAQ CLPGRTDNEI
101: KNYWRTRMRK KAQERRMSTS ASPSPSSSSS NISSSANEPP PDLVMKKRDG MESVAVGSSL TLGFGTNEGV MAYSMDQIWD EIAATDRVSG LSTEEHKHGA
201: RSVASPLWEH CSASPWKVDD EEFEMPTPAD GLVISSL
101: KNYWRTRMRK KAQERRMSTS ASPSPSSSSS NISSSANEPP PDLVMKKRDG MESVAVGSSL TLGFGTNEGV MAYSMDQIWD EIAATDRVSG LSTEEHKHGA
201: RSVASPLWEH CSASPWKVDD EEFEMPTPAD GLVISSL
001: MENSMKKKKS FKESEDEELR RGPWTLEEDT LLTNYILHNG EGRWNHVAKC AGLKRTGKSC RLRWLNYLKP DIRRGNLTPQ EQLLILELHS KWGNRWSKIA
101: QYLPGRTDNE IKNYWRTRVQ KQARQLNIES NSDKFFDAVR SFWVPRLIEK MEQNSSTTTT YCCPQNNNNN SLLLPSQSHD SLSMQKDIDY SGFSNIDGSS
201: STSTCMSHLT TVPHFMDQSN TNIIDGSMCF HEGNVQEFGG YVPGMEDYMV NSDISMECHV ADGYSAYEDV TQDPMWNVDD IWQFRE
101: QYLPGRTDNE IKNYWRTRVQ KQARQLNIES NSDKFFDAVR SFWVPRLIEK MEQNSSTTTT YCCPQNNNNN SLLLPSQSHD SLSMQKDIDY SGFSNIDGSS
201: STSTCMSHLT TVPHFMDQSN TNIIDGSMCF HEGNVQEFGG YVPGMEDYMV NSDISMECHV ADGYSAYEDV TQDPMWNVDD IWQFRE
Arabidopsis Description
MYB62Transcription factor MYB62 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9G7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.