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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr4P19990_001 Banana nucleus 38.85 78.91
GSMUA_Achr5P21090_001 Banana nucleus 54.23 77.47
GSMUA_Achr3P01370_001 Banana nucleus 33.85 70.97
CDX85422 Canola nucleus 47.69 67.76
GSMUA_Achr8P10800_001 Banana nucleus 66.15 67.19
GSMUA_Achr11P... Banana nucleus 67.69 67.18
CDX86220 Canola nucleus 47.69 64.25
GSMUA_AchrUn_... Banana nucleus 66.15 61.21
GSMUA_Achr3P12730_001 Banana nucleus 38.85 57.71
GSMUA_AchrUn_... Banana nucleus 55.77 54.31
PGSC0003DMT400011745 Potato nucleus 48.85 54.27
PGSC0003DMT400011750 Potato nucleus 47.69 53.91
GSMUA_Achr8P29910_001 Banana nucleus 55.77 53.9
GSMUA_Achr11P... Banana nucleus 54.62 53.79
Solyc12g099130.1.1 Tomato nucleus 48.08 53.19
GSMUA_Achr10P... Banana nucleus 35.77 53.14
Solyc12g099120.1.1 Tomato nucleus 48.85 51.42
GSMUA_Achr1P24960_001 Banana nucleus 52.69 50.74
GSMUA_Achr6P27290_001 Banana nucleus 36.92 49.23
GSMUA_Achr1P21020_001 Banana nucleus 36.54 48.72
VIT_05s0077g00500.t01 Wine grape nucleus 56.54 48.04
AT1G48000.1 Thale cress nucleus 44.62 47.74
GSMUA_Achr1P27270_001 Banana nucleus 35.77 47.45
Solyc01g057910.2.1 Tomato nucleus 52.31 47.39
GSMUA_Achr11P... Banana nucleus 61.92 46.8
PGSC0003DMT400022600 Potato nucleus 53.08 46.46
GSMUA_AchrUn_... Banana nucleus 48.08 45.45
GSMUA_Achr7P05570_001 Banana nucleus 46.92 44.85
Bra001202.1-P Field mustard nucleus 52.31 44.74
KRH50671 Soybean nucleus 55.38 44.31
CDY24688 Canola nucleus 53.85 43.89
KRH02414 Soybean nucleus 54.23 43.79
KRH36928 Soybean nucleus 56.92 43.53
KRG97314 Soybean nucleus 56.92 43.4
Solyc05g053330.2.1 Tomato nucleus 53.08 43.4
GSMUA_Achr3P08370_001 Banana nucleus 47.69 43.21
Bra029582.1-P Field mustard nucleus 53.46 43.17
CDY05270 Canola nucleus 53.46 43.17
PGSC0003DMT400011748 Potato nucleus 48.85 43.05
CDY34949 Canola nucleus 52.69 42.81
Bra040274.1-P Field mustard nucleus 52.69 42.81
CDX99864 Canola nucleus 52.69 42.81
CDY05611 Canola nucleus 52.31 42.77
CDY33891 Canola nucleus 52.31 42.77
Bra020624.1-P Field mustard nucleus 52.31 42.77
PGSC0003DMT400069841 Potato nucleus 53.08 42.59
AT3G06490.1 Thale cress nucleus 52.69 42.41
AT5G49620.2 Thale cress nucleus 52.31 42.37
Bra010021.1-P Field mustard nucleus 52.31 42.11
Bra010022.1-P Field mustard nucleus 52.31 42.11
Solyc12g099140.1.1 Tomato nucleus 48.08 41.67
GSMUA_Achr8P18460_001 Banana nucleus 39.23 40.96
CDY70282 Canola nucleus 43.85 38.78
GSMUA_Achr9P28370_001 Banana nucleus 31.54 38.32
GSMUA_Achr4P29230_001 Banana nucleus 29.62 37.75
GSMUA_Achr2P22640_001 Banana nucleus 42.31 37.67
GSMUA_Achr3P21060_001 Banana nucleus 43.46 37.29
GSMUA_Achr2P16200_001 Banana nucleus 29.23 37.07
GSMUA_Achr11P... Banana nucleus 30.0 36.62
GSMUA_Achr11P... Banana nucleus 43.46 35.87
GSMUA_Achr10P... Banana nucleus 29.23 35.85
GSMUA_Achr6P09760_001 Banana nucleus 42.31 35.71
GSMUA_Achr6P15370_001 Banana nucleus 28.08 34.93
GSMUA_Achr10P... Banana nucleus 30.0 34.51
GSMUA_Achr11P... Banana nucleus 30.38 34.35
GSMUA_Achr8P12710_001 Banana nucleus 30.0 33.77
GSMUA_Achr1P03450_001 Banana nucleus 30.77 32.92
GSMUA_Achr5P28350_001 Banana nucleus 30.0 32.91
GSMUA_Achr11P... Banana nucleus 30.0 32.37
GSMUA_Achr8P02640_001 Banana nucleus 28.85 31.78
CDX74100 Canola nucleus 41.15 31.75
GSMUA_Achr10P... Banana nucleus 28.46 31.36
GSMUA_Achr7P18200_001 Banana nucleus 27.69 29.88
GSMUA_Achr8P34340_001 Banana nucleus 27.69 29.39
CDY58600 Canola nucleus 24.62 19.81
GSMUA_Achr9P07000_001 Banana nucleus 41.54 8.59
Protein Annotations
Gene3D:1.10.10.60MapMan:15.5.2.1GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488
EnsemblPlantsGene:GSMUA_Achr9G16640_001EnsemblPlants:GSMUA_Achr9P16640_001EnsemblPlants:GSMUA_Achr9T16640_001InterPro:Homeobox-like_sfInterPro:IPR017930UniProt:M0U0X1
InterPro:Myb_domPFAM:PF00249PFscan:PS51294PANTHER:PTHR10641PANTHER:PTHR10641:SF743InterPro:SANT/Myb
SMART:SM00717SUPFAM:SSF46689UniParc:UPI00029488A6:::
Description
MYB family transcription factor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G16640_001]
Coordinates
chr9:-:11293636..11294662
Molecular Weight (calculated)
29824.3 Da
IEP (calculated)
7.572
GRAVY (calculated)
-0.682
Length
260 amino acids
Sequence
(BLAST)
001: MELHGRPCSS ATRQSEEGMD LRRGPWTVDE DLILMNYVTT HGEGRWNSLA RCAGLRRTGK SCRLRWLNYL RPDVRRGNIT PEEQLLILEL HSRLGNRWSK
101: IAQHLPGRTD NEIKNYWRTR VQKHAKQLRC DVNSKQFKDI MRYVWMPRLV ERIREASINS FAAMHQNAAA PLAPMQPLHP IAQPAPENTT DSLFSSPLVS
201: ESFTGSRETQ AGDDTVVDWI QEPRLPSPGG YACPDLPDFD HGGWGESLWS VDDIWLQQQL
Best Arabidopsis Sequence Match ( AT5G49620.1 )
(BLAST)
001: MGDKGRSLKI NKNMEEFTKV EEEMDVRRGP WTVEEDLELI NYIASHGEGR WNSLARCAEL KRTGKSCRLR WLNYLRPDVR RGNITLEEQL LILELHTRWG
101: NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA KQLKCDVNSQ QFKDTMKYLW MPRLVERIQA ASIGSVSMSS CVTTSSDQFV INNNNTNNVD NLALMSNPNG
201: YITPDNSSVA VSPVSDLTEC QVSSEVWKIG QDENLVDPKM TSPNYMDNSS GLLNGDFTKM QDQSDLNWFE NINGMVPNYS DSFWNIGNDE DFWLLQQHQQ
301: VHDNGSF
Arabidopsis Description
AtMYB78myb domain protein 78 [Source:TAIR;Acc:AT5G49620]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.