Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g099120.1.1 | Tomato | nucleus | 93.62 | 89.07 |
| PGSC0003DMT400011750 | Potato | nucleus | 85.53 | 87.39 |
| GSMUA_Achr4P19990_001 | Banana | nucleus | 39.57 | 72.66 |
| CDX85422 | Canola | nucleus | 53.62 | 68.85 |
| GSMUA_Achr5P21090_001 | Banana | nucleus | 51.06 | 65.93 |
| CDX86220 | Canola | nucleus | 53.62 | 65.28 |
| Solyc02g086690.2.1 | Tomato | nucleus | 25.96 | 64.89 |
| GSMUA_Achr3P12730_001 | Banana | nucleus | 39.57 | 53.14 |
| Solyc02g067760.2.1 | Tomato | nucleus | 41.7 | 50.26 |
| AT1G48000.1 | Thale cress | nucleus | 51.49 | 49.79 |
| GSMUA_Achr11P... | Banana | nucleus | 55.32 | 49.62 |
| Solyc09g008390.1.1 | Tomato | nucleus | 27.66 | 49.62 |
| VIT_05s0077g00500.t01 | Wine grape | nucleus | 64.26 | 49.35 |
| GSMUA_Achr8P10800_001 | Banana | nucleus | 53.62 | 49.22 |
| Solyc01g057910.2.1 | Tomato | nucleus | 60.0 | 49.13 |
| GSMUA_Achr11P... | Banana | nucleus | 54.04 | 48.11 |
| GSMUA_Achr9P16640_001 | Banana | nucleus | 53.19 | 48.08 |
| Bra001202.1-P | Field mustard | nucleus | 60.85 | 47.04 |
| CDY33891 | Canola | nucleus | 62.98 | 46.54 |
| CDY05611 | Canola | nucleus | 62.98 | 46.54 |
| Bra020624.1-P | Field mustard | nucleus | 62.98 | 46.54 |
| GSMUA_AchrUn_... | Banana | nucleus | 52.77 | 46.44 |
| GSMUA_AchrUn_... | Banana | nucleus | 54.89 | 45.91 |
| GSMUA_Achr8P29910_001 | Banana | nucleus | 51.91 | 45.35 |
| CDY24688 | Canola | nucleus | 61.28 | 45.14 |
| Solyc12g099140.1.1 | Tomato | nucleus | 57.45 | 45.0 |
| GSMUA_Achr1P24960_001 | Banana | nucleus | 51.49 | 44.81 |
| CDY05270 | Canola | nucleus | 61.28 | 44.72 |
| Solyc05g053330.2.1 | Tomato | nucleus | 60.0 | 44.34 |
| Bra029582.1-P | Field mustard | nucleus | 60.43 | 44.1 |
| CDY34949 | Canola | nucleus | 60.0 | 44.06 |
| Bra040274.1-P | Field mustard | nucleus | 60.0 | 44.06 |
| CDX99864 | Canola | nucleus | 60.0 | 44.06 |
| KRH02414 | Soybean | nucleus | 60.0 | 43.79 |
| Bra010021.1-P | Field mustard | nucleus | 60.0 | 43.65 |
| Bra010022.1-P | Field mustard | nucleus | 60.0 | 43.65 |
| TraesCS5B01G093000.1 | Wheat | nucleus | 50.64 | 42.81 |
| KRH50671 | Soybean | nucleus | 59.15 | 42.77 |
| TraesCS5D01G099100.1 | Wheat | nucleus | 49.79 | 42.09 |
| TraesCS4A01G172200.1 | Wheat | nucleus | 51.49 | 41.87 |
| HORVU5Hr1G022690.1 | Barley | nucleus | 50.21 | 41.84 |
| HORVU4Hr1G028780.1 | Barley | nucleus | 51.91 | 41.64 |
| TraesCSU01G069000.1 | Wheat | nucleus | 51.06 | 41.38 |
| TraesCS5A01G087100.1 | Wheat | nucleus | 48.94 | 41.37 |
| TraesCS4D01G142900.1 | Wheat | nucleus | 51.49 | 41.3 |
| GSMUA_AchrUn_... | Banana | nucleus | 48.09 | 41.09 |
| KRH36928 | Soybean | nucleus | 59.15 | 40.88 |
| CDY70282 | Canola | nucleus | 50.64 | 40.48 |
| KRG97314 | Soybean | nucleus | 58.3 | 40.18 |
| TraesCS4B01G179500.1 | Wheat | nucleus | 54.04 | 39.94 |
| TraesCS4D01G181100.1 | Wheat | nucleus | 54.04 | 39.81 |
| TraesCS4A01G124900.1 | Wheat | nucleus | 54.04 | 39.81 |
| Solyc05g009230.1.1 | Tomato | nucleus | 45.96 | 39.42 |
| EES00624 | Sorghum | nucleus | 50.64 | 38.89 |
| GSMUA_Achr7P05570_001 | Banana | nucleus | 44.68 | 38.6 |
| TraesCS3D01G413700.1 | Wheat | nucleus | 48.09 | 38.57 |
| Zm00001d040594_P001 | Maize | nucleus | 48.94 | 37.95 |
| TraesCS3D01G014800.1 | Wheat | nucleus | 44.68 | 37.77 |
| KXG39500 | Sorghum | nucleus | 53.19 | 37.2 |
| TraesCS3B01G453300.1 | Wheat | nucleus | 48.51 | 37.13 |
| GSMUA_Achr11P... | Banana | nucleus | 54.04 | 36.92 |
| Zm00001d028930_P001 | Maize | nucleus | 52.77 | 36.9 |
| TraesCS3A01G418100.1 | Wheat | nucleus | 48.09 | 36.69 |
| Solyc03g119370.1.1 | Tomato | nucleus | 43.4 | 36.43 |
| GSMUA_Achr3P08370_001 | Banana | nucleus | 44.26 | 36.24 |
| TraesCS1D01G078600.1 | Wheat | nucleus | 49.79 | 36.22 |
| HORVU1Hr1G016420.1 | Barley | nucleus | 49.79 | 36.0 |
| TraesCS1A01G076200.1 | Wheat | nucleus | 49.36 | 35.8 |
| TraesCS1B01G094500.1 | Wheat | nucleus | 49.36 | 35.58 |
| KXG36991 | Sorghum | nucleus | 51.49 | 35.38 |
| TraesCS2A01G097200.1 | Wheat | nucleus | 48.94 | 35.28 |
| Zm00001d047579_P001 | Maize | nucleus | 51.91 | 34.96 |
| Zm00001d009066_P001 | Maize | nucleus | 47.23 | 34.91 |
| TraesCS2D01G096000.1 | Wheat | nucleus | 48.51 | 34.76 |
| TraesCS2B01G112600.1 | Wheat | nucleus | 48.94 | 34.64 |
| Solyc05g053150.1.1 | Tomato | nucleus | 33.62 | 34.5 |
| HORVU4Hr1G052490.5 | Barley | nucleus, plastid | 54.04 | 34.42 |
| Zm00001d007191_P001 | Maize | nucleus | 50.64 | 34.29 |
| EES17207 | Sorghum | nucleus | 48.94 | 34.12 |
| Solyc11g073120.1.1 | Tomato | nucleus | 31.49 | 34.1 |
| Solyc10g083900.1.1 | Tomato | nucleus | 28.94 | 34.0 |
| Zm00001d048647_P001 | Maize | nucleus | 50.21 | 33.52 |
| Zm00001d030644_P001 | Maize | nucleus | 49.36 | 33.05 |
| CDX74100 | Canola | nucleus | 47.23 | 32.94 |
| HORVU3Hr1G092820.1 | Barley | nucleus | 46.38 | 32.93 |
| Zm00001d024726_P001 | Maize | nucleus | 48.51 | 32.11 |
| EES10257 | Sorghum | nucleus | 49.79 | 32.05 |
| Solyc02g089190.1.1 | Tomato | nucleus | 32.34 | 31.8 |
| Zm00001d010933_P001 | Maize | nucleus | 48.94 | 31.34 |
| Solyc09g090790.2.1 | Tomato | nucleus | 32.77 | 30.68 |
| HORVU2Hr1G016380.1 | Barley | nucleus | 47.23 | 30.58 |
| Solyc06g005330.2.1 | Tomato | nucleus | 29.79 | 29.66 |
| Os05t0132700-01 | Rice | nucleus | 26.38 | 28.84 |
| Zm00001d024725_P001 | Maize | nucleus | 49.36 | 28.57 |
| KXG21220 | Sorghum | nucleus | 48.94 | 28.33 |
| KXG21221 | Sorghum | nucleus | 48.94 | 24.11 |
| CDY58600 | Canola | nucleus | 26.38 | 19.2 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| UniProt:K4DHT4 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF494 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | EnsemblPlantsGene:Solyc12g099130.1 | EnsemblPlants:Solyc12g099130.1.1 | UniParc:UPI000276A537 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr12:+:66395516..66396421
Molecular Weight (calculated)
28056.8 Da
IEP (calculated)
6.252
GRAVY (calculated)
-0.874
Length
235 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKLINQENY IDEEIMELRR GPWTVEEDFI LMNYISHHGE GRWNSLSRCA GLKRTGKSCR LRWLNYLRPN IRHGNITLEE QLLILQLHFR WGNRWSKIAE
101: HLPGRTDNEI KNYWRTRVQK HAKQLKCDVN SKQFKDTLRY LWIPRLVERI EASKISNNNC INEAQRSVTS TSVTLENSSV ATSSENSNQD YNQVNQSDQL
201: WYEDYQAMDQ QNNIELWMDN EDVFNNLCNI EDIWS
101: HLPGRTDNEI KNYWRTRVQK HAKQLKCDVN SKQFKDTLRY LWIPRLVERI EASKISNNNC INEAQRSVTS TSVTLENSSV ATSSENSNQD YNQVNQSDQL
201: WYEDYQAMDQ QNNIELWMDN EDVFNNLCNI EDIWS
001: MNISRTEFAN CKTLINHKEE VEEVEKKMEI EIRRGPWTVE EDMKLVSYIS LHGEGRWNSL SRSAGLNRTG KSCRLRWLNY LRPDIRRGDI SLQEQFIILE
101: LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD TIKHLWMPRL IERIAATQSV QFTSNHYSPE NSSVATATSS TSSSEAVRSS
201: FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW LIQ
101: LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD TIKHLWMPRL IERIAATQSV QFTSNHYSPE NSSVATATSS TSSSEAVRSS
201: FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW LIQ
Arabidopsis Description
MYB112MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q94CJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.