Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG36991 | Sorghum | nucleus | 82.42 | 83.63 |
| CDX85422 | Canola | nucleus | 35.16 | 66.67 |
| CDX86220 | Canola | nucleus | 34.87 | 62.69 |
| Solyc12g099130.1.1 | Tomato | nucleus | 34.29 | 50.64 |
| PGSC0003DMT400011745 | Potato | nucleus | 33.72 | 50.0 |
| PGSC0003DMT400011750 | Potato | nucleus | 32.85 | 49.57 |
| Solyc12g099120.1.1 | Tomato | nucleus | 34.58 | 48.58 |
| AT1G48000.1 | Thale cress | nucleus | 34.01 | 48.56 |
| Solyc01g057910.2.1 | Tomato | nucleus | 38.33 | 46.34 |
| VIT_05s0077g00500.t01 | Wine grape | nucleus | 40.63 | 46.08 |
| Os07t0688200-01 | Rice | nucleus | 39.77 | 46.0 |
| PGSC0003DMT400022600 | Potato | nucleus | 38.62 | 45.12 |
| Bra020624.1-P | Field mustard | nucleus | 40.06 | 43.71 |
| CDY05611 | Canola | nucleus | 40.06 | 43.71 |
| CDY33891 | Canola | nucleus | 40.06 | 43.71 |
| Zm00001d040594_P001 | Maize | nucleus | 37.75 | 43.23 |
| Bra001202.1-P | Field mustard | nucleus | 37.75 | 43.09 |
| KRH02414 | Soybean | nucleus | 39.77 | 42.86 |
| KRH50671 | Soybean | nucleus | 39.77 | 42.46 |
| Zm00001d047579_P001 | Maize | nucleus | 42.07 | 41.83 |
| PGSC0003DMT400011748 | Potato | nucleus | 35.45 | 41.69 |
| Zm00001d028930_P001 | Maize | nucleus | 40.35 | 41.67 |
| Bra010022.1-P | Field mustard | nucleus | 38.62 | 41.49 |
| Bra010021.1-P | Field mustard | nucleus | 38.62 | 41.49 |
| CDY24688 | Canola | nucleus | 37.75 | 41.07 |
| Solyc05g053330.2.1 | Tomato | nucleus | 37.46 | 40.88 |
| Bra029582.1-P | Field mustard | nucleus | 37.75 | 40.68 |
| CDY05270 | Canola | nucleus | 37.75 | 40.68 |
| Solyc12g099140.1.1 | Tomato | nucleus | 35.16 | 40.67 |
| TraesCS2B01G112600.1 | Wheat | nucleus | 38.62 | 40.36 |
| TraesCS2D01G096000.1 | Wheat | nucleus | 38.04 | 40.24 |
| AT5G49620.2 | Thale cress | nucleus | 37.18 | 40.19 |
| TraesCS2A01G097200.1 | Wheat | nucleus | 37.75 | 40.18 |
| AT3G06490.1 | Thale cress | nucleus | 37.18 | 39.94 |
| Zm00001d009066_P001 | Maize | nucleus | 36.6 | 39.94 |
| PGSC0003DMT400069841 | Potato | nucleus | 37.18 | 39.81 |
| KRH36928 | Soybean | nucleus | 38.9 | 39.71 |
| Bra040274.1-P | Field mustard | nucleus | 36.6 | 39.69 |
| CDX99864 | Canola | nucleus | 36.6 | 39.69 |
| CDY34949 | Canola | nucleus | 36.6 | 39.69 |
| KRG97314 | Soybean | nucleus | 38.33 | 39.0 |
| Zm00001d048647_P001 | Maize | nucleus | 38.04 | 37.5 |
| CDY70282 | Canola | nucleus | 31.41 | 37.07 |
| Zm00001d030644_P001 | Maize | nucleus | 37.46 | 37.04 |
| Zm00001d010933_P001 | Maize | nucleus | 38.62 | 36.51 |
| Zm00001d024726_P001 | Maize | nucleus | 37.18 | 36.34 |
| Zm00001d030678_P001 | Maize | nucleus | 25.07 | 35.95 |
| Zm00001d008528_P001 | Maize | nucleus | 37.18 | 35.64 |
| Zm00001d048623_P002 | Maize | nucleus | 23.05 | 35.09 |
| HORVU2Hr1G016380.1 | Barley | nucleus | 36.6 | 34.99 |
| Zm00001d040019_P001 | Maize | nucleus | 35.73 | 34.25 |
| Zm00001d044107_P001 | Maize | nucleus | 25.94 | 34.09 |
| Zm00001d048383_P001 | Maize | nucleus | 22.77 | 34.05 |
| Zm00001d041576_P001 | Maize | nucleus | 24.5 | 34.0 |
| Zm00001d024725_P001 | Maize | nucleus | 38.9 | 33.25 |
| Zm00001d027623_P001 | Maize | nucleus | 22.77 | 31.73 |
| Zm00001d017243_P001 | Maize | nucleus | 25.36 | 31.32 |
| CDX74100 | Canola | nucleus | 29.68 | 30.56 |
| Zm00001d025823_P001 | Maize | nucleus | 23.63 | 29.5 |
| Zm00001d035605_P001 | Maize | nucleus | 26.51 | 28.13 |
| Zm00001d051117_P001 | Maize | nucleus | 20.75 | 25.81 |
| Zm00001d035604_P001 | Maize | nucleus | 25.07 | 23.64 |
| CDY58600 | Canola | nucleus | 20.75 | 22.29 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100192609 | MapMan:15.5.2.1 | UniProt:B4FBZ6 | EMBL:BT034634 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017877 | InterPro:IPR017930 |
| InterPro:Myb-like_dom | InterPro:Myb_dom | ProteinID:ONM26258.1 | PFAM:PF00249 | PFscan:PS50090 | PFscan:PS51294 |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF908 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00017B6460 |
| EnsemblPlantsGene:Zm00001d007191 | EnsemblPlants:Zm00001d007191_P001 | EnsemblPlants:Zm00001d007191_T001 | SEG:seg | : | : |
Description
MYB-transcription factor 110myb domain protein 112
Coordinates
chr2:-:224248136..224249179
Molecular Weight (calculated)
38286.8 Da
IEP (calculated)
5.177
GRAVY (calculated)
-0.462
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MAARDHRELS GDEDSVVAAG DLRRGPWTVE EDMLLVNYVA AHGEGRWNAL ARCAGTRCCM LVATLRDDDQ TNNTMNCAYA GLRRTGKSCR LRWLNYLRPD
101: LRRGNITAQE QLLILELHSR WGNRWSKIAQ HLPGRTDNEI KNYWRTRVQK HARQLNCDVN SQRFKDLMRY IWMPRLLERI GSDDSGDGAF VIDAATPTPT
201: PTLLTAATWC VDDVELSCTT AVSSSSSVST DSMHQQQQQQ QLVAVSPPPQ PAAFGESNND ASHYGVHNSN AAMSMWGDTL CQPPHSATPH LAGAGTCSWS
301: DESLLVPDAG GGVYADMGLP DLCDTDTMWA AGASADDDLW YTQIMGL
101: LRRGNITAQE QLLILELHSR WGNRWSKIAQ HLPGRTDNEI KNYWRTRVQK HARQLNCDVN SQRFKDLMRY IWMPRLLERI GSDDSGDGAF VIDAATPTPT
201: PTLLTAATWC VDDVELSCTT AVSSSSSVST DSMHQQQQQQ QLVAVSPPPQ PAAFGESNND ASHYGVHNSN AAMSMWGDTL CQPPHSATPH LAGAGTCSWS
301: DESLLVPDAG GGVYADMGLP DLCDTDTMWA AGASADDDLW YTQIMGL
001: MNISRTEFAN CKTLINHKEE VEEVEKKMEI EIRRGPWTVE EDMKLVSYIS LHGEGRWNSL SRSAGLNRTG KSCRLRWLNY LRPDIRRGDI SLQEQFIILE
101: LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD TIKHLWMPRL IERIAATQSV QFTSNHYSPE NSSVATATSS TSSSEAVRSS
201: FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW LIQ
101: LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD TIKHLWMPRL IERIAATQSV QFTSNHYSPE NSSVATATSS TSSSEAVRSS
201: FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW LIQ
Arabidopsis Description
MYB112MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q94CJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.