Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG29192 | Sorghum | nucleus | 90.79 | 90.79 |
| Os11t0700500-01 | Rice | nucleus | 78.07 | 75.11 |
| TraesCS4A01G173300.2 | Wheat | nucleus | 75.0 | 71.85 |
| TraesCS4D01G142300.1 | Wheat | nucleus | 74.56 | 71.43 |
| TraesCS4B01G143700.1 | Wheat | nucleus | 74.12 | 71.01 |
| Zm00001d030678_P001 | Maize | nucleus | 71.93 | 67.77 |
| Zm00001d041576_P001 | Maize | nucleus | 71.93 | 65.6 |
| AT5G59780.3 | Thale cress | nucleus | 53.51 | 51.91 |
| PGSC0003DMT400040149 | Potato | nucleus | 49.12 | 51.38 |
| Solyc11g073120.1.1 | Tomato | nucleus | 48.68 | 51.15 |
| CDX80230 | Canola | nucleus | 51.75 | 49.79 |
| CDX71075 | Canola | nucleus | 52.19 | 49.38 |
| Bra002533.1-P | Field mustard | nucleus | 51.32 | 49.37 |
| CDY49581 | Canola | nucleus | 51.32 | 49.37 |
| VIT_06s0004g04140.t01 | Wine grape | nucleus | 54.82 | 48.83 |
| Bra006694.1-P | Field mustard | nucleus | 51.75 | 48.76 |
| CDY70097 | Canola | nucleus | 50.44 | 48.73 |
| Bra020289.1-P | Field mustard | nucleus | 50.44 | 48.73 |
| Solyc06g005330.2.1 | Tomato | nucleus | 50.0 | 48.31 |
| CDX88722 | Canola | nucleus | 50.88 | 47.93 |
| Bra018223.1-P | Field mustard | nucleus | 52.63 | 47.62 |
| KRH10298 | Soybean | nucleus | 50.0 | 44.71 |
| AT3G46130.1 | Thale cress | nucleus | 50.44 | 44.57 |
| KRH23019 | Soybean | nucleus | 50.0 | 43.18 |
| CDX86040 | Canola | nucleus | 52.63 | 43.17 |
| CDX86041 | Canola | nucleus | 52.63 | 43.17 |
| CDX99125 | Canola | nucleus | 52.63 | 43.17 |
| KRH29850 | Soybean | nucleus | 49.56 | 42.48 |
| KRH24842 | Soybean | nucleus | 47.81 | 40.98 |
| Zm00001d035605_P001 | Maize | nucleus | 42.98 | 29.97 |
| Zm00001d048383_P001 | Maize | nucleus | 30.26 | 29.74 |
| Zm00001d044107_P001 | Maize | nucleus | 32.89 | 28.41 |
| Zm00001d027623_P001 | Maize | nucleus | 30.7 | 28.11 |
| Zm00001d035604_P001 | Maize | nucleus | 45.18 | 27.99 |
| Zm00001d017243_P001 | Maize | nucleus | 33.33 | 27.05 |
| Zm00001d025823_P001 | Maize | nucleus | 32.46 | 26.62 |
| Zm00001d028930_P001 | Maize | nucleus | 35.09 | 23.81 |
| Zm00001d040594_P001 | Maize | nucleus | 31.58 | 23.76 |
| Zm00001d007191_P001 | Maize | nucleus | 35.09 | 23.05 |
| Zm00001d047579_P001 | Maize | nucleus | 33.77 | 22.06 |
| Zm00001d009066_P001 | Maize | nucleus | 30.7 | 22.01 |
| Zm00001d030644_P001 | Maize | nucleus | 33.77 | 21.94 |
| Zm00001d051117_P001 | Maize | nucleus | 25.88 | 21.15 |
| Zm00001d008528_P001 | Maize | nucleus | 32.02 | 20.17 |
| Zm00001d040019_P001 | Maize | nucleus | 31.58 | 19.89 |
| Zm00001d010933_P001 | Maize | nucleus | 31.58 | 19.62 |
| Zm00001d048647_P001 | Maize | nucleus | 30.26 | 19.6 |
| Zm00001d024726_P001 | Maize | nucleus | 30.26 | 19.44 |
| Zm00001d024725_P001 | Maize | nucleus | 30.7 | 17.24 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | ProteinID:AQK48276.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:K7TQE6 | EMBL:KJ727898 | InterPro:Myb_dom |
| PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF698 | InterPro:SANT/Myb | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000220E743 | EnsemblPlantsGene:Zm00001d048623 | EnsemblPlants:Zm00001d048623_P002 | EnsemblPlants:Zm00001d048623_T002 | SEG:seg |
Description
MYB-transcription factor 88Putative MYB DNA-binding domain superfamily protein
Coordinates
chr4:+:1532824..1534194
Molecular Weight (calculated)
26309.6 Da
IEP (calculated)
8.491
GRAVY (calculated)
-0.649
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MVTVREEMRK GPWTEQEDIQ LVCTVRLFGD HRWDFIAQVS GLNRTGKSCR LRWVNYLHPG LKHGRMSPQE ERIIIELHAR WGNRWSRIAR RLPGRTDNEI
101: KNYWRTHMRK KAQERKMGMP SPSSSSSSLT YQTCLLDTIP VIGMGSGDTH NGSCVTSTLE NTQSVMDGYP MDQIWKEIEA PHAPNLLSIA EGKEKTCSSS
201: PCHLPSPVMW DYKCPEIFWK MGDQEIMM
101: KNYWRTHMRK KAQERKMGMP SPSSSSSSLT YQTCLLDTIP VIGMGSGDTH NGSCVTSTLE NTQSVMDGYP MDQIWKEIEA PHAPNLLSIA EGKEKTCSSS
201: PCHLPSPVMW DYKCPEIFWK MGDQEIMM
001: MKLVQEEYRK GPWTEQEDIL LVNFVHLFGD RRWDFVAKVS GLNRTGKSCR LRWVNYLHPG LKRGKMTPQE ERLVLELHAK WGNRWSKIAR KLPGRTDNEI
101: KNYWRTHMRK KAQEKKRPMS PTSSSSNCCS SSMTTTTSQD TGGSNGKMNQ ECEDGYYSMD DIWREIDQSG ANVIKPVKDN YYSEQSCYLN FPPLASPTWE
201: SSLESIWNMD ADESKMSSFA IDQFPLSFEH GSGRL
101: KNYWRTHMRK KAQEKKRPMS PTSSSSNCCS SSMTTTTSQD TGGSNGKMNQ ECEDGYYSMD DIWREIDQSG ANVIKPVKDN YYSEQSCYLN FPPLASPTWE
201: SSLESIWNMD ADESKMSSFA IDQFPLSFEH GSGRL
Arabidopsis Description
MYB59Transcription factor MYB59 [Source:UniProtKB/Swiss-Prot;Acc:Q4JL84]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.