Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG39500 | Sorghum | nucleus | 85.39 | 88.69 |
| Zm00001d028930_P001 | Maize | nucleus | 79.94 | 83.04 |
| TraesCS4B01G179500.1 | Wheat | nucleus | 70.49 | 77.36 |
| TraesCS4A01G124900.1 | Wheat | nucleus | 69.63 | 76.18 |
| TraesCS4D01G181100.1 | Wheat | nucleus | 69.63 | 76.18 |
| Os03t0315400-01 | Rice | nucleus | 68.19 | 72.34 |
| CDX85422 | Canola | nucleus | 36.1 | 68.85 |
| CDX86220 | Canola | nucleus | 36.1 | 65.28 |
| HORVU4Hr1G052490.5 | Barley | nucleus, plastid | 67.91 | 64.23 |
| GSMUA_Achr1P24960_001 | Banana | nucleus | 42.12 | 54.44 |
| PGSC0003DMT400011745 | Potato | nucleus | 35.24 | 52.56 |
| Solyc12g099130.1.1 | Tomato | nucleus | 34.96 | 51.91 |
| AT1G48000.1 | Thale cress | nucleus | 36.1 | 51.85 |
| PGSC0003DMT400011750 | Potato | nucleus | 34.1 | 51.74 |
| Solyc12g099120.1.1 | Tomato | nucleus | 35.53 | 50.2 |
| VIT_05s0077g00500.t01 | Wine grape | nucleus | 42.69 | 48.69 |
| Solyc01g057910.2.1 | Tomato | nucleus | 39.26 | 47.74 |
| PGSC0003DMT400022600 | Potato | nucleus | 40.11 | 47.14 |
| Bra001202.1-P | Field mustard | nucleus | 40.4 | 46.38 |
| KRH50671 | Soybean | nucleus | 41.55 | 44.62 |
| KRH02414 | Soybean | nucleus | 40.97 | 44.41 |
| PGSC0003DMT400011748 | Potato | nucleus | 37.54 | 44.41 |
| Solyc05g053330.2.1 | Tomato | nucleus | 40.11 | 44.03 |
| CDY24688 | Canola | nucleus | 40.11 | 43.89 |
| CDY05270 | Canola | nucleus | 40.11 | 43.48 |
| CDY34949 | Canola | nucleus | 39.83 | 43.44 |
| CDX99864 | Canola | nucleus | 39.83 | 43.44 |
| Bra040274.1-P | Field mustard | nucleus | 39.83 | 43.44 |
| CDY33891 | Canola | nucleus | 39.54 | 43.4 |
| CDY05611 | Canola | nucleus | 39.54 | 43.4 |
| Bra020624.1-P | Field mustard | nucleus | 39.54 | 43.4 |
| Solyc12g099140.1.1 | Tomato | nucleus | 37.25 | 43.33 |
| PGSC0003DMT400069841 | Potato | nucleus | 40.11 | 43.21 |
| Bra029582.1-P | Field mustard | nucleus | 39.83 | 43.17 |
| AT3G06490.1 | Thale cress | nucleus | 39.83 | 43.03 |
| Zm00001d040594_P001 | Maize | nucleus | 37.25 | 42.9 |
| KRH36928 | Soybean | nucleus | 41.26 | 42.35 |
| KRG97314 | Soybean | nucleus | 41.26 | 42.23 |
| Bra010022.1-P | Field mustard | nucleus | 38.97 | 42.11 |
| Bra010021.1-P | Field mustard | nucleus | 38.97 | 42.11 |
| Zm00001d007191_P001 | Maize | nucleus | 41.83 | 42.07 |
| AT5G49620.2 | Thale cress | nucleus | 38.68 | 42.06 |
| Zm00001d024726_P001 | Maize | nucleus | 40.4 | 39.72 |
| Zm00001d010933_P001 | Maize | nucleus | 41.55 | 39.51 |
| Zm00001d009066_P001 | Maize | nucleus | 35.82 | 39.31 |
| CDY70282 | Canola | nucleus | 32.66 | 38.78 |
| Zm00001d048647_P001 | Maize | nucleus | 38.11 | 37.78 |
| Zm00001d044107_P001 | Maize | nucleus | 28.08 | 37.12 |
| Zm00001d030644_P001 | Maize | nucleus | 37.25 | 37.04 |
| Zm00001d008528_P001 | Maize | nucleus | 37.25 | 35.91 |
| Zm00001d040019_P001 | Maize | nucleus | 36.96 | 35.64 |
| Zm00001d024725_P001 | Maize | nucleus | 40.69 | 34.98 |
| Zm00001d048383_P001 | Maize | nucleus | 23.21 | 34.91 |
| Zm00001d017243_P001 | Maize | nucleus | 27.22 | 33.81 |
| Zm00001d048623_P002 | Maize | nucleus | 22.06 | 33.77 |
| Zm00001d041576_P001 | Maize | nucleus | 24.07 | 33.6 |
| Zm00001d030678_P001 | Maize | nucleus | 23.21 | 33.47 |
| Zm00001d027623_P001 | Maize | nucleus | 23.5 | 32.93 |
| CDX74100 | Canola | nucleus | 31.23 | 32.34 |
| Zm00001d025823_P001 | Maize | nucleus | 25.21 | 31.65 |
| Zm00001d051117_P001 | Maize | nucleus | 22.64 | 28.32 |
| Zm00001d035605_P001 | Maize | nucleus | 24.36 | 25.99 |
| CDY58600 | Canola | nucleus | 20.06 | 21.67 |
| Zm00001d035604_P001 | Maize | nucleus | 22.64 | 21.47 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100272451 | MapMan:15.5.2.1 | ProteinID:AQL07037.1 | UniProt:B4FNP8 | EMBL:BT038736 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF743 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00017B6C95 | EnsemblPlantsGene:Zm00001d047579 | EnsemblPlants:Zm00001d047579_P001 | EnsemblPlants:Zm00001d047579_T001 |
| SEG:seg | : | : | : | : | : |
Description
MYB-transcription factor 29myb domain protein 112
Coordinates
chr9:-:136185732..136187949
Molecular Weight (calculated)
37889.9 Da
IEP (calculated)
5.187
GRAVY (calculated)
-0.483
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMAHERDAS SEEEVVAGEL RRGPWTVEED LLLVNYVAAH GEGRWNSLAR SAGLRRTGKS CRLRWLNYLR PDLRRGNITP QEQLLILELH SRWGNRWSKI
101: AQHLPGRTDN EIKNYWRTRV QKHAKQLKCD VNSQQFKDVM RYLWMPRLVE RIQNAGAAGA PQQHKAGAAD TPLSSPSSWQ PGGGGGADDG LYASPDLPAT
201: DACCWPPADC YPAAAAAAVG DGDHHHQLLM NNPAAVPELS ASTTTAGSAS PSSDSGAGAQ PCWLAPVGGA EWFTTTCDAS SSTAAVLLAG HQQQQQQQQW
301: SCLLGEATWA SSSELPDLGC VADFEIGSFD VESIWSTDDS LWFTQAQGV
101: AQHLPGRTDN EIKNYWRTRV QKHAKQLKCD VNSQQFKDVM RYLWMPRLVE RIQNAGAAGA PQQHKAGAAD TPLSSPSSWQ PGGGGGADDG LYASPDLPAT
201: DACCWPPADC YPAAAAAAVG DGDHHHQLLM NNPAAVPELS ASTTTAGSAS PSSDSGAGAQ PCWLAPVGGA EWFTTTCDAS SSTAAVLLAG HQQQQQQQQW
301: SCLLGEATWA SSSELPDLGC VADFEIGSFD VESIWSTDDS LWFTQAQGV
001: MDEKGRSLKN NNMEDEMDLK RGPWTAEEDF KLMNYIATNG EGRWNSLSRC AGLQRTGKSC RLRWLNYLRP DVRRGNITLE EQLLILELHS RWGNRWSKIA
101: QYLPGRTDNE IKNYWRTRVQ KHAKQLKCDV NSQQFKDTMK YLWMPRLVER IQSASASSAA AATTTTTTTT GSAGTSSCIT TSNNQFMNYD YNNNNMGQQF
201: GVMSNNDYIT PENSSVAVSP ASDLTEYYSA PNPNPEYYSG QMGNSYYPDQ NLVSSQLLPD NYFDYSGLLD EDLTAMQEQS NLSWFENING AASSSDSLWN
301: IGETDEEFWF LQQQQQFNNN GSF
101: QYLPGRTDNE IKNYWRTRVQ KHAKQLKCDV NSQQFKDTMK YLWMPRLVER IQSASASSAA AATTTTTTTT GSAGTSSCIT TSNNQFMNYD YNNNNMGQQF
201: GVMSNNDYIT PENSSVAVSP ASDLTEYYSA PNPNPEYYSG QMGNSYYPDQ NLVSSQLLPD NYFDYSGLLD EDLTAMQEQS NLSWFENING AASSSDSLWN
301: IGETDEEFWF LQQQQQFNNN GSF
Arabidopsis Description
MYB108Transcription factor MYB108 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDE1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.