Skip to main content
crop-pal logo
Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 2
  • nucleus 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES10257 Sorghum nucleus 68.75 66.3
CDX85422 Canola nucleus 32.39 62.3
Os11t0684000-01 Rice nucleus 50.0 61.75
TraesCS4A01G172200.1 Wheat nucleus 50.0 60.9
TraesCS4D01G142900.1 Wheat nucleus 50.28 60.41
TraesCSU01G069000.1 Wheat nucleus 49.72 60.34
HORVU4Hr1G028780.1 Barley nucleus 49.72 59.73
CDX86220 Canola nucleus 32.39 59.07
PGSC0003DMT400011750 Potato nucleus 33.24 50.87
PGSC0003DMT400011745 Potato nucleus 33.81 50.85
Solyc12g099130.1.1 Tomato nucleus 33.52 50.21
Zm00001d030644_P001 Maize nucleus 48.58 48.72
Solyc12g099120.1.1 Tomato nucleus 34.09 48.58
Solyc01g057910.2.1 Tomato nucleus 39.49 48.43
AT1G48000.1 Thale cress nucleus 33.24 48.15
VIT_05s0077g00500.t01 Wine grape nucleus 40.62 46.73
PGSC0003DMT400022600 Potato nucleus 38.92 46.13
Zm00001d040594_P001 Maize nucleus 37.5 43.56
PGSC0003DMT400011748 Potato nucleus 35.51 42.37
KRH02414 Soybean nucleus 38.64 42.24
KRH50671 Soybean nucleus 38.07 41.23
Bra001202.1-P Field mustard nucleus 35.51 41.12
Solyc05g053330.2.1 Tomato nucleus 36.65 40.57
Zm00001d009066_P001 Maize nucleus 36.65 40.57
PGSC0003DMT400069841 Potato nucleus 37.22 40.43
Solyc12g099140.1.1 Tomato nucleus 34.09 40.0
Zm00001d028930_P001 Maize nucleus 38.07 39.88
KRH36928 Soybean nucleus 38.07 39.41
CDX99864 Canola nucleus 35.8 39.38
Bra040274.1-P Field mustard nucleus 35.8 39.38
CDY34949 Canola nucleus 35.8 39.38
CDY24688 Canola nucleus 35.51 39.19
Bra020624.1-P Field mustard nucleus 35.23 38.99
CDY33891 Canola nucleus 35.23 38.99
CDY05611 Canola nucleus 35.23 38.99
Bra029582.1-P Field mustard nucleus 35.51 38.82
CDY05270 Canola nucleus 35.51 38.82
KRG97314 Soybean nucleus 37.5 38.71
AT3G06490.1 Thale cress nucleus 35.23 38.39
AT5G49620.2 Thale cress nucleus 34.94 38.32
Zm00001d047579_P001 Maize nucleus 37.78 38.11
Zm00001d007191_P001 Maize nucleus 37.5 38.04
Bra010021.1-P Field mustard nucleus 34.66 37.77
Bra010022.1-P Field mustard nucleus 34.66 37.77
Zm00001d024726_P001 Maize nucleus 36.93 36.62
CDY70282 Canola nucleus 30.11 36.05
Zm00001d010933_P001 Maize nucleus 37.5 35.97
Zm00001d008528_P001 Maize nucleus 35.8 34.81
Zm00001d044107_P001 Maize nucleus 25.28 33.71
Zm00001d040019_P001 Maize nucleus 34.38 33.43
Zm00001d048383_P001 Maize nucleus 21.88 33.19
Zm00001d024725_P001 Maize nucleus 37.22 32.27
Zm00001d030678_P001 Maize nucleus 21.88 31.82
Zm00001d027623_P001 Maize nucleus 22.16 31.33
Zm00001d017243_P001 Maize nucleus 25.0 31.32
Zm00001d041576_P001 Maize nucleus 21.59 30.4
Zm00001d048623_P002 Maize nucleus 19.6 30.26
Zm00001d025823_P001 Maize nucleus 23.86 30.22
CDX74100 Canola nucleus 28.41 29.67
Zm00001d051117_P001 Maize nucleus 20.74 26.16
Zm00001d035605_P001 Maize nucleus 23.01 24.77
Zm00001d035604_P001 Maize nucleus 21.88 20.92
CDY58600 Canola nucleus 18.47 20.12
Protein Annotations
Gene3D:1.10.10.60MapMan:15.5.2.1ProteinID:AQK48322.1GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488InterPro:Homeobox-like_sfInterPro:IPR017930UniProt:K7TU66EMBL:KJ728414InterPro:Myb_dom
PFAM:PF00249PFscan:PS51294PANTHER:PTHR10641PANTHER:PTHR10641:SF548InterPro:SANT/MybSMART:SM00717
SUPFAM:SSF46689UniParc:UPI000221A9C8EnsemblPlantsGene:Zm00001d048647EnsemblPlants:Zm00001d048647_P001EnsemblPlants:Zm00001d048647_T001SEG:seg
Description
MYB-transcription factor 4Putative MYB DNA-binding domain superfamily protein
Coordinates
chr4:+:2600276..2602518
Molecular Weight (calculated)
38461.4 Da
IEP (calculated)
6.581
GRAVY (calculated)
-0.569
Length
352 amino acids
Sequence
(BLAST)
001: METALQQSAA TAGGGMRPAG AATTVKKARQ ELELEQEREL RFPQAAAAAD QGGLDEELRR GPWTVDEDLT LINYIADHGE GRWNALARAA GLKRTGKSCR
101: LRWLNYLRPD VKRGDFTADE QLLILDLHSR WGNRWSKIAA HLPGRTDNEI KNYWRTRVQK HAKQLNCDVN SKRFKDAMRF LWMPRLAERA ATAAHQPQPQ
201: HVAAACNNVL VAAAAAANSS SCCWSSPRSS AVTTAACSGS SSCSSLTSES AHNDDDGARP HAAAVLAAAA AATGDDDYWG AVTTTMQQNH HQQQQQNEQF
301: DFWSTASALQ HLTTAAADQD LTGWVQGFSD DGILSGSSSD SLWSLDDIWR MQ
Best Arabidopsis Sequence Match ( AT1G48000.1 )
(BLAST)
001: MNISRTEFAN CKTLINHKEE VEEVEKKMEI EIRRGPWTVE EDMKLVSYIS LHGEGRWNSL SRSAGLNRTG KSCRLRWLNY LRPDIRRGDI SLQEQFIILE
101: LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD TIKHLWMPRL IERIAATQSV QFTSNHYSPE NSSVATATSS TSSSEAVRSS
201: FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW LIQ
Arabidopsis Description
MYB112MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q94CJ3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.