Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES00624 | Sorghum | nucleus | 82.84 | 82.03 |
| Zm00001d009066_P001 | Maize | nucleus | 78.22 | 74.53 |
| CDX85422 | Canola | nucleus | 36.3 | 60.11 |
| Os01t0298400-01 | Rice | extracellular, nucleus | 55.45 | 57.34 |
| TraesCS3D01G413700.1 | Wheat | nucleus | 55.12 | 57.0 |
| CDX86220 | Canola | nucleus | 36.3 | 56.99 |
| TraesCS3B01G453300.1 | Wheat | nucleus | 55.12 | 54.4 |
| TraesCS3A01G418100.1 | Wheat | nucleus | 54.46 | 53.57 |
| HORVU3Hr1G092820.1 | Barley | nucleus | 55.45 | 50.76 |
| PGSC0003DMT400011750 | Potato | nucleus | 37.62 | 49.57 |
| PGSC0003DMT400011745 | Potato | nucleus | 37.95 | 49.15 |
| Solyc12g099130.1.1 | Tomato | nucleus | 37.95 | 48.94 |
| Solyc12g099120.1.1 | Tomato | nucleus | 38.94 | 47.77 |
| AT1G48000.1 | Thale cress | nucleus | 35.64 | 44.44 |
| Solyc01g057910.2.1 | Tomato | nucleus | 41.58 | 43.9 |
| VIT_05s0077g00500.t01 | Wine grape | nucleus | 44.22 | 43.79 |
| PGSC0003DMT400022600 | Potato | nucleus | 42.24 | 43.1 |
| PGSC0003DMT400011748 | Potato | nucleus | 38.61 | 39.66 |
| Bra001202.1-P | Field mustard | nucleus | 39.6 | 39.47 |
| AT5G49620.2 | Thale cress | nucleus | 41.58 | 39.25 |
| KRH02414 | Soybean | nucleus | 41.58 | 39.13 |
| KRH50671 | Soybean | nucleus | 41.91 | 39.08 |
| Solyc05g053330.2.1 | Tomato | nucleus | 40.92 | 38.99 |
| Zm00001d028930_P001 | Maize | nucleus | 42.9 | 38.69 |
| Solyc12g099140.1.1 | Tomato | nucleus | 38.28 | 38.67 |
| CDY24688 | Canola | nucleus | 40.59 | 38.56 |
| AT3G06490.1 | Thale cress | nucleus | 40.92 | 38.39 |
| Bra029582.1-P | Field mustard | nucleus | 40.59 | 38.2 |
| Bra020624.1-P | Field mustard | nucleus | 39.93 | 38.05 |
| CDY05611 | Canola | nucleus | 39.93 | 38.05 |
| CDY33891 | Canola | nucleus | 39.93 | 38.05 |
| CDY05270 | Canola | nucleus | 40.26 | 37.89 |
| Bra040274.1-P | Field mustard | nucleus | 39.93 | 37.81 |
| CDX99864 | Canola | nucleus | 39.93 | 37.81 |
| CDY34949 | Canola | nucleus | 39.93 | 37.81 |
| Zm00001d007191_P001 | Maize | nucleus | 43.23 | 37.75 |
| PGSC0003DMT400069841 | Potato | nucleus | 40.26 | 37.65 |
| Zm00001d048647_P001 | Maize | nucleus | 43.56 | 37.5 |
| KRH36928 | Soybean | nucleus | 41.91 | 37.35 |
| Zm00001d047579_P001 | Maize | nucleus | 42.9 | 37.25 |
| KRG97314 | Soybean | nucleus | 41.91 | 37.24 |
| Bra010021.1-P | Field mustard | nucleus | 39.27 | 36.84 |
| Bra010022.1-P | Field mustard | nucleus | 39.27 | 36.84 |
| Zm00001d030644_P001 | Maize | nucleus | 41.58 | 35.9 |
| Zm00001d010933_P001 | Maize | nucleus | 41.91 | 34.6 |
| CDY70282 | Canola | nucleus | 33.0 | 34.01 |
| GSMUA_Achr11P... | Banana | nucleus | 38.61 | 34.01 |
| Zm00001d024726_P001 | Maize | nucleus | 39.6 | 33.8 |
| Zm00001d048383_P001 | Maize | nucleus | 24.75 | 32.33 |
| Zm00001d040019_P001 | Maize | nucleus | 37.95 | 31.77 |
| Zm00001d048623_P002 | Maize | nucleus | 23.76 | 31.58 |
| Zm00001d008528_P001 | Maize | nucleus | 37.62 | 31.49 |
| Zm00001d044107_P001 | Maize | nucleus | 27.06 | 31.06 |
| Zm00001d030678_P001 | Maize | nucleus | 24.75 | 30.99 |
| Zm00001d027623_P001 | Maize | nucleus | 25.41 | 30.92 |
| Zm00001d024725_P001 | Maize | nucleus | 41.25 | 30.79 |
| Zm00001d041576_P001 | Maize | nucleus | 25.08 | 30.4 |
| Zm00001d017243_P001 | Maize | nucleus | 27.39 | 29.54 |
| Zm00001d025823_P001 | Maize | nucleus | 27.06 | 29.5 |
| CDX74100 | Canola | nucleus | 30.69 | 27.6 |
| Zm00001d035605_P001 | Maize | nucleus | 26.4 | 24.46 |
| Zm00001d051117_P001 | Maize | nucleus | 22.11 | 24.01 |
| Zm00001d035604_P001 | Maize | nucleus | 26.4 | 21.74 |
| CDY58600 | Canola | nucleus | 21.78 | 20.43 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100285675 | MapMan:15.5.2.1 | UniProt:B6U822 | EMBL:EU973387 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom |
| ProteinID:ONM31616.1 | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF659 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000182FC7D | EnsemblPlantsGene:Zm00001d040594 | EnsemblPlants:Zm00001d040594_P001 | EnsemblPlants:Zm00001d040594_T001 |
| SEG:seg | : | : | : | : | : |
Description
MYB-transcription factor 145Cpm7
Coordinates
chr3:+:52179189..52180100
Molecular Weight (calculated)
33335.3 Da
IEP (calculated)
6.282
GRAVY (calculated)
-0.617
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MDALWNGSSC DWPAPTVIIS DDDAAAAELR RGPWTVDEDA LLAAHVAAHG EGRWNELARD AGLRRTGKSC RLRWLNYLRP GVRRGGFTPR EQLLILDLHS
101: RWGNRWSKIA AHLPGRTDNE VKNYWRTRVQ KHAKQLHCDV GSRRFHDAMR NLWMPRLIER IHADDSAAVA ANATGDVSHF YSASPSHELS SSSQPAPAYR
201: NAAPNGSCAR APSPDASCVT GPSSWSREAS PASQFQSSGS TIAGPSTSTE LCQNGCSSAT SVDMFDESWS ELLARANHDD TDFGLGETGD NWWGLEDIWE
301: QPL
101: RWGNRWSKIA AHLPGRTDNE VKNYWRTRVQ KHAKQLHCDV GSRRFHDAMR NLWMPRLIER IHADDSAAVA ANATGDVSHF YSASPSHELS SSSQPAPAYR
201: NAAPNGSCAR APSPDASCVT GPSSWSREAS PASQFQSSGS TIAGPSTSTE LCQNGCSSAT SVDMFDESWS ELLARANHDD TDFGLGETGD NWWGLEDIWE
301: QPL
001: MNISRTEFAN CKTLINHKEE VEEVEKKMEI EIRRGPWTVE EDMKLVSYIS LHGEGRWNSL SRSAGLNRTG KSCRLRWLNY LRPDIRRGDI SLQEQFIILE
101: LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD TIKHLWMPRL IERIAATQSV QFTSNHYSPE NSSVATATSS TSSSEAVRSS
201: FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW LIQ
101: LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD TIKHLWMPRL IERIAATQSV QFTSNHYSPE NSSVATATSS TSSSEAVRSS
201: FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW LIQ
Arabidopsis Description
MYB112MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q94CJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.