Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d024725_P001 | Maize | nucleus | 86.48 | 75.62 |
| KXG21220 | Sorghum | nucleus | 79.15 | 69.21 |
| Zm00001d010933_P001 | Maize | nucleus | 69.01 | 66.76 |
| CDX85422 | Canola | nucleus | 32.68 | 63.39 |
| CDX86220 | Canola | nucleus | 32.68 | 60.1 |
| PGSC0003DMT400011745 | Potato | nucleus | 32.11 | 48.72 |
| PGSC0003DMT400011750 | Potato | nucleus | 31.55 | 48.7 |
| Solyc12g099130.1.1 | Tomato | nucleus | 32.11 | 48.51 |
| AT1G48000.1 | Thale cress | nucleus | 32.11 | 46.91 |
| Solyc12g099120.1.1 | Tomato | nucleus | 32.39 | 46.56 |
| VIT_05s0077g00500.t01 | Wine grape | nucleus | 38.03 | 44.12 |
| Solyc01g057910.2.1 | Tomato | nucleus | 34.65 | 42.86 |
| PGSC0003DMT400022600 | Potato | nucleus | 34.93 | 41.75 |
| PGSC0003DMT400011748 | Potato | nucleus | 34.37 | 41.36 |
| KRH36928 | Soybean | nucleus | 39.44 | 41.18 |
| Zm00001d028930_P001 | Maize | nucleus | 38.59 | 40.77 |
| KRG97314 | Soybean | nucleus | 39.15 | 40.76 |
| KRH50671 | Soybean | nucleus | 37.18 | 40.62 |
| Zm00001d047579_P001 | Maize | nucleus | 39.72 | 40.4 |
| Solyc05g053330.2.1 | Tomato | nucleus | 36.06 | 40.25 |
| Solyc12g099140.1.1 | Tomato | nucleus | 33.8 | 40.0 |
| KRH02414 | Soybean | nucleus | 36.06 | 39.75 |
| Zm00001d040594_P001 | Maize | nucleus | 33.8 | 39.6 |
| Bra001202.1-P | Field mustard | nucleus | 32.96 | 38.49 |
| CDY33891 | Canola | nucleus | 34.37 | 38.36 |
| CDY05611 | Canola | nucleus | 34.37 | 38.36 |
| Bra020624.1-P | Field mustard | nucleus | 34.37 | 38.36 |
| PGSC0003DMT400069841 | Potato | nucleus | 34.93 | 38.27 |
| AT5G49620.2 | Thale cress | nucleus | 34.08 | 37.69 |
| Bra010022.1-P | Field mustard | nucleus | 34.08 | 37.46 |
| Bra010021.1-P | Field mustard | nucleus | 34.08 | 37.46 |
| Zm00001d007191_P001 | Maize | nucleus | 36.34 | 37.18 |
| Zm00001d009066_P001 | Maize | nucleus | 33.24 | 37.11 |
| Zm00001d048647_P001 | Maize | nucleus | 36.62 | 36.93 |
| CDY24688 | Canola | nucleus | 32.68 | 36.36 |
| Bra029582.1-P | Field mustard | nucleus | 32.96 | 36.34 |
| Bra040274.1-P | Field mustard | nucleus | 32.68 | 36.25 |
| CDY34949 | Canola | nucleus | 32.68 | 36.25 |
| CDX99864 | Canola | nucleus | 32.68 | 36.25 |
| CDY05270 | Canola | nucleus | 32.68 | 36.02 |
| AT3G06490.1 | Thale cress | nucleus | 32.11 | 35.29 |
| Zm00001d008528_P001 | Maize | nucleus | 35.77 | 35.08 |
| Zm00001d030644_P001 | Maize | nucleus | 33.8 | 34.19 |
| Zm00001d044107_P001 | Maize | nucleus | 25.35 | 34.09 |
| Zm00001d040019_P001 | Maize | nucleus | 33.8 | 33.15 |
| Zm00001d048383_P001 | Maize | nucleus | 21.41 | 32.76 |
| CDY70282 | Canola | nucleus | 26.48 | 31.97 |
| Zm00001d017243_P001 | Maize | nucleus | 24.51 | 30.96 |
| Zm00001d041576_P001 | Maize | nucleus | 21.69 | 30.8 |
| Zm00001d030678_P001 | Maize | nucleus | 20.85 | 30.58 |
| Zm00001d048623_P002 | Maize | nucleus | 19.44 | 30.26 |
| Zm00001d027623_P001 | Maize | nucleus | 21.13 | 30.12 |
| Zm00001d025823_P001 | Maize | nucleus | 23.38 | 29.86 |
| Zm00001d035605_P001 | Maize | nucleus | 24.51 | 26.61 |
| CDX74100 | Canola | nucleus | 25.07 | 26.41 |
| Zm00001d051117_P001 | Maize | nucleus | 20.28 | 25.81 |
| Zm00001d035604_P001 | Maize | nucleus | 22.82 | 22.01 |
| CDY58600 | Canola | nucleus | 20.0 | 21.98 |
Protein Annotations
| EnsemblPlants:Zm00001d024726_P001 | EnsemblPlants:Zm00001d024726_T001 | EnsemblPlantsGene:Zm00001d024726 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF921 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:AQK41930.1 | SEG:seg |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0008447855 | UniProt:A0A1D6J1K4 | MapMan:15.5.2.1 | : |
Description
MYB-transcription factor 134myb domain protein 112
Coordinates
chr10:-:85360224..85361291
Molecular Weight (calculated)
38637.4 Da
IEP (calculated)
5.506
GRAVY (calculated)
-0.538
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMMGFDEDL DQVLAAMGPA DSSATSSAPN AAAPAPLAVV PAGSSDDEEA AAADSADDLR RGPWTVDEDI LLVNYIAAHG EGRWNSLARS AGLKRTGKSC
101: RLRWLNYLRP NVRRGNITAE EQLLILDLHS RWGNRWSKIA QQLPGRTDNE IKNYWRTRVQ KHARHLRCDV NSAHFRHIVR HVWMPRLRER AQAGGVQAPA
201: TTTASAPPAC YNYCGSQHLV QQQGAHRGVT AASEAHHHHQ YYSEPAGPTS AATALSPDDA SSALRSSSLR ADDASHYTAA YTYTSAATAT PTTNDQGYEQ
301: TTTDDDVFAG STTSELLVTA TGGPDDEYSS MIGLQLQDFG FEDFEYGLWS LDDLC
101: RLRWLNYLRP NVRRGNITAE EQLLILDLHS RWGNRWSKIA QQLPGRTDNE IKNYWRTRVQ KHARHLRCDV NSAHFRHIVR HVWMPRLRER AQAGGVQAPA
201: TTTASAPPAC YNYCGSQHLV QQQGAHRGVT AASEAHHHHQ YYSEPAGPTS AATALSPDDA SSALRSSSLR ADDASHYTAA YTYTSAATAT PTTNDQGYEQ
301: TTTDDDVFAG STTSELLVTA TGGPDDEYSS MIGLQLQDFG FEDFEYGLWS LDDLC
001: MGDKGRSLKI NKNMEEFTKV EEEMDVRRGP WTVEEDLELI NYIASHGEGR WNSLARCAEL KRTGKSCRLR WLNYLRPDVR RGNITLEEQL LILELHTRWG
101: NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA KQLKCDVNSQ QFKDTMKYLW MPRLVERIQA ASIGSVSMSS CVTTSSDQFV INNNNTNNVD NLALMSNPNG
201: YITPDNSSVA VSPVSDLTEC QVSSEVWKIG QDENLVDPKM TSPNYMDNSS GLLNGDFTKM QDQSDLNWFE NINGMVPNYS DSFWNIGNDE DFWLLQQHQQ
301: VHDNGSF
101: NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA KQLKCDVNSQ QFKDTMKYLW MPRLVERIQA ASIGSVSMSS CVTTSSDQFV INNNNTNNVD NLALMSNPNG
201: YITPDNSSVA VSPVSDLTEC QVSSEVWKIG QDENLVDPKM TSPNYMDNSS GLLNGDFTKM QDQSDLNWFE NINGMVPNYS DSFWNIGNDE DFWLLQQHQQ
301: VHDNGSF
Arabidopsis Description
AtMYB78myb domain protein 78 [Source:TAIR;Acc:AT5G49620]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.