Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG39500 | Sorghum | nucleus | 85.71 | 85.71 |
| Zm00001d047579_P001 | Maize | nucleus | 83.04 | 79.94 |
| TraesCS4D01G181100.1 | Wheat | nucleus | 72.32 | 76.18 |
| TraesCS4A01G124900.1 | Wheat | nucleus | 72.32 | 76.18 |
| TraesCS4B01G179500.1 | Wheat | nucleus | 71.73 | 75.79 |
| Os03t0315400-01 | Rice | nucleus | 71.43 | 72.95 |
| CDX85422 | Canola | nucleus | 38.69 | 71.04 |
| CDX86220 | Canola | nucleus | 38.69 | 67.36 |
| HORVU4Hr1G052490.5 | Barley | nucleus, plastid | 70.54 | 64.23 |
| GSMUA_Achr1P24960_001 | Banana | nucleus | 43.15 | 53.7 |
| PGSC0003DMT400011745 | Potato | nucleus | 37.2 | 53.42 |
| Solyc12g099130.1.1 | Tomato | nucleus | 36.9 | 52.77 |
| PGSC0003DMT400011750 | Potato | nucleus | 36.01 | 52.61 |
| AT1G48000.1 | Thale cress | nucleus | 37.5 | 51.85 |
| Solyc12g099120.1.1 | Tomato | nucleus | 37.5 | 51.01 |
| Solyc01g057910.2.1 | Tomato | nucleus | 42.86 | 50.17 |
| VIT_05s0077g00500.t01 | Wine grape | nucleus | 44.94 | 49.35 |
| PGSC0003DMT400022600 | Potato | nucleus | 42.86 | 48.48 |
| Bra001202.1-P | Field mustard | nucleus | 42.26 | 46.71 |
| KRH50671 | Soybean | nucleus | 44.64 | 46.15 |
| KRH02414 | Soybean | nucleus | 43.75 | 45.65 |
| CDY05611 | Canola | nucleus | 42.26 | 44.65 |
| CDY33891 | Canola | nucleus | 42.26 | 44.65 |
| Bra020624.1-P | Field mustard | nucleus | 42.26 | 44.65 |
| PGSC0003DMT400011748 | Potato | nucleus | 38.99 | 44.41 |
| Solyc05g053330.2.1 | Tomato | nucleus | 41.96 | 44.34 |
| AT5G49620.2 | Thale cress | nucleus | 42.26 | 44.24 |
| PGSC0003DMT400069841 | Potato | nucleus | 42.26 | 43.83 |
| CDY24688 | Canola | nucleus | 41.37 | 43.57 |
| KRH36928 | Soybean | nucleus | 44.05 | 43.53 |
| Bra029582.1-P | Field mustard | nucleus | 41.67 | 43.48 |
| CDY34949 | Canola | nucleus | 41.37 | 43.44 |
| CDX99864 | Canola | nucleus | 41.37 | 43.44 |
| KRG97314 | Soybean | nucleus | 44.05 | 43.4 |
| AT3G06490.1 | Thale cress | nucleus | 41.67 | 43.34 |
| Solyc12g099140.1.1 | Tomato | nucleus | 38.69 | 43.33 |
| CDY05270 | Canola | nucleus | 41.37 | 43.17 |
| Bra040274.1-P | Field mustard | nucleus | 41.07 | 43.12 |
| Bra010021.1-P | Field mustard | nucleus | 41.37 | 43.03 |
| Bra010022.1-P | Field mustard | nucleus | 41.37 | 43.03 |
| Zm00001d040594_P001 | Maize | nucleus | 38.69 | 42.9 |
| Zm00001d007191_P001 | Maize | nucleus | 41.67 | 40.35 |
| Zm00001d009066_P001 | Maize | nucleus | 38.1 | 40.25 |
| CDY70282 | Canola | nucleus | 34.52 | 39.46 |
| Zm00001d010933_P001 | Maize | nucleus | 42.56 | 38.96 |
| Zm00001d024726_P001 | Maize | nucleus | 40.77 | 38.59 |
| Zm00001d048647_P001 | Maize | nucleus | 39.88 | 38.07 |
| Zm00001d030644_P001 | Maize | nucleus | 39.58 | 37.89 |
| Zm00001d044107_P001 | Maize | nucleus | 28.87 | 36.74 |
| Zm00001d040019_P001 | Maize | nucleus | 38.39 | 35.64 |
| Zm00001d048623_P002 | Maize | nucleus | 23.81 | 35.09 |
| Zm00001d024725_P001 | Maize | nucleus | 41.96 | 34.73 |
| Zm00001d008528_P001 | Maize | nucleus | 36.61 | 33.98 |
| Zm00001d017243_P001 | Maize | nucleus | 28.27 | 33.81 |
| Zm00001d041576_P001 | Maize | nucleus | 25.0 | 33.6 |
| Zm00001d030678_P001 | Maize | nucleus | 24.11 | 33.47 |
| Zm00001d048383_P001 | Maize | nucleus | 22.92 | 33.19 |
| CDX74100 | Canola | nucleus | 32.74 | 32.64 |
| Zm00001d025823_P001 | Maize | nucleus | 25.89 | 31.3 |
| Zm00001d027623_P001 | Maize | nucleus | 22.92 | 30.92 |
| Zm00001d051117_P001 | Maize | nucleus | 23.21 | 27.96 |
| Zm00001d035605_P001 | Maize | nucleus | 24.4 | 25.08 |
| Zm00001d035604_P001 | Maize | nucleus | 24.4 | 22.28 |
| CDY58600 | Canola | nucleus | 21.13 | 21.98 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100274036 | MapMan:15.5.2.1 | UniProt:B4FYQ1 | EMBL:BT042239 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom |
| ProteinID:ONL97444.1 | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF743 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00017B7FF4 | EnsemblPlantsGene:Zm00001d028930 | EnsemblPlants:Zm00001d028930_P001 | EnsemblPlants:Zm00001d028930_T001 |
| SEG:seg | : | : | : | : | : |
Description
MYB-transcription factor 75myb domain protein 112
Coordinates
chr1:-:51839504..51841800
Molecular Weight (calculated)
36468.1 Da
IEP (calculated)
4.625
GRAVY (calculated)
-0.518
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMAHERSDA SSEEEVMAGE LRRGPWTVEE DLQLVNYVDA HGEGRWNSLA RSAGLKRTGK SCRLRWLNYL RPDLRRGNIT PQEQLMILEL HSRWGNRWSK
101: IAQHLPGRTD NEIKNYWRTR VQKHAKQLKC DVNSQQFKDV MRYLWMPRLV ERIQAAAANN NASGAGVPPA GAAADDTPLS SSWQHGGGAD DDGGLYASPE
201: LPTDACWPPA DCYYYPAAAD HQLLNNPAAA AVFPDLSSTT AGSSSPSSDS GAGTAQPWPA PLGGAEWLTT GACCDASSAA AALGGQQQQS CLVGETSWAS
301: SELPELGVAD FEIGSFDVES IWSMDDSLWF TQAQGV
101: IAQHLPGRTD NEIKNYWRTR VQKHAKQLKC DVNSQQFKDV MRYLWMPRLV ERIQAAAANN NASGAGVPPA GAAADDTPLS SSWQHGGGAD DDGGLYASPE
201: LPTDACWPPA DCYYYPAAAD HQLLNNPAAA AVFPDLSSTT AGSSSPSSDS GAGTAQPWPA PLGGAEWLTT GACCDASSAA AALGGQQQQS CLVGETSWAS
301: SELPELGVAD FEIGSFDVES IWSMDDSLWF TQAQGV
001: MGDKGRSLKI NKNMEEFTKV EEEMDVRRGP WTVEEDLELI NYIASHGEGR WNSLARCAEL KRTGKSCRLR WLNYLRPDVR RGNITLEEQL LILELHTRWG
101: NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA KQLKCDVNSQ QFKDTMKYLW MPRLVERIQA ASIGSVSMSS CVTTSSDQFV INNNNTNNVD NLALMSNPNG
201: YITPDNSSVA VSPVSDLTEC QVSSEVWKIG QDENLVDPKM TSPNYMDNSS GLLNGDFTKM QDQSDLNWFE NINGMVPNYS DSFWNIGNDE DFWLLQQHQQ
301: VHDNGSF
101: NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA KQLKCDVNSQ QFKDTMKYLW MPRLVERIQA ASIGSVSMSS CVTTSSDQFV INNNNTNNVD NLALMSNPNG
201: YITPDNSSVA VSPVSDLTEC QVSSEVWKIG QDENLVDPKM TSPNYMDNSS GLLNGDFTKM QDQSDLNWFE NINGMVPNYS DSFWNIGNDE DFWLLQQHQQ
301: VHDNGSF
Arabidopsis Description
AtMYB78myb domain protein 78 [Source:TAIR;Acc:AT5G49620]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.