Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86220 | Canola | nucleus | 95.08 | 90.16 |
| GSMUA_Achr4P19990_001 | Banana | nucleus | 52.46 | 75.0 |
| GSMUA_Achr5P21090_001 | Banana | nucleus | 61.75 | 62.09 |
| Bra010021.1-P | Field mustard | nucleus | 95.63 | 54.18 |
| Bra010022.1-P | Field mustard | nucleus | 95.63 | 54.18 |
| GSMUA_Achr3P12730_001 | Banana | nucleus | 51.37 | 53.71 |
| Solyc12g099130.1.1 | Tomato | nucleus | 68.85 | 53.62 |
| PGSC0003DMT400011745 | Potato | nucleus | 67.76 | 52.99 |
| CDY58599 | Canola | nucleus | 30.6 | 52.83 |
| Solyc12g099120.1.1 | Tomato | nucleus | 70.49 | 52.23 |
| PGSC0003DMT400011750 | Potato | nucleus | 65.03 | 51.74 |
| CDY05611 | Canola | nucleus | 89.62 | 51.57 |
| CDY33891 | Canola | nucleus | 89.62 | 51.57 |
| GSMUA_Achr8P10800_001 | Banana | nucleus | 68.85 | 49.22 |
| GSMUA_Achr11P... | Banana | nucleus | 69.95 | 48.85 |
| Solyc01g057910.2.1 | Tomato | nucleus | 76.5 | 48.78 |
| CDX95420 | Canola | nucleus | 61.2 | 48.28 |
| PGSC0003DMT400022600 | Potato | nucleus | 78.14 | 48.15 |
| GSMUA_Achr9P16640_001 | Banana | nucleus | 67.76 | 47.69 |
| GSMUA_Achr11P... | Banana | nucleus | 67.21 | 46.59 |
| AT5G49620.2 | Thale cress | nucleus | 81.42 | 46.42 |
| CDY24688 | Canola | nucleus | 80.33 | 46.08 |
| VIT_05s0077g00500.t01 | Wine grape | nucleus | 77.05 | 46.08 |
| GSMUA_AchrUn_... | Banana | nucleus | 67.21 | 46.07 |
| GSMUA_Achr8P29910_001 | Banana | nucleus | 67.21 | 45.72 |
| CDX99864 | Canola | nucleus | 79.78 | 45.62 |
| CDY34949 | Canola | nucleus | 79.78 | 45.62 |
| CDY05270 | Canola | nucleus | 79.78 | 45.34 |
| GSMUA_AchrUn_... | Banana | nucleus | 69.4 | 45.2 |
| GSMUA_Achr1P24960_001 | Banana | nucleus | 66.12 | 44.81 |
| PGSC0003DMT400011748 | Potato | nucleus | 69.95 | 43.39 |
| GSMUA_AchrUn_... | Banana | nucleus | 65.03 | 43.27 |
| Solyc12g099140.1.1 | Tomato | nucleus | 70.49 | 43.0 |
| KRH02414 | Soybean | nucleus | 75.41 | 42.86 |
| Solyc05g053330.2.1 | Tomato | nucleus | 73.77 | 42.45 |
| CDY00146 | Canola | nucleus | 38.25 | 42.17 |
| KRH50671 | Soybean | nucleus | 74.32 | 41.85 |
| TraesCS4A01G172200.1 | Wheat | nucleus | 65.57 | 41.52 |
| HORVU4Hr1G028780.1 | Barley | nucleus | 66.12 | 41.3 |
| CDY37512 | Canola | nucleus | 45.36 | 41.29 |
| CDY27504 | Canola | nucleus | 61.2 | 41.18 |
| TraesCS4A01G124900.1 | Wheat | nucleus | 71.58 | 41.07 |
| TraesCS4D01G181100.1 | Wheat | nucleus | 71.58 | 41.07 |
| TraesCSU01G069000.1 | Wheat | nucleus | 65.03 | 41.03 |
| PGSC0003DMT400069841 | Potato | nucleus | 72.13 | 40.74 |
| CDX80085 | Canola | nucleus | 44.26 | 40.7 |
| TraesCS5B01G093000.1 | Wheat | nucleus | 61.75 | 40.65 |
| CDY49063 | Canola | nucleus | 45.9 | 40.58 |
| TraesCS4B01G179500.1 | Wheat | nucleus | 70.49 | 40.57 |
| TraesCS5D01G099100.1 | Wheat | nucleus | 61.2 | 40.29 |
| TraesCS4D01G142900.1 | Wheat | nucleus | 64.48 | 40.27 |
| CDY70282 | Canola | nucleus | 64.48 | 40.14 |
| CDY20036 | Canola | nucleus | 50.82 | 40.09 |
| KRH36928 | Soybean | nucleus | 74.32 | 40.0 |
| TraesCS5A01G087100.1 | Wheat | nucleus | 60.66 | 39.93 |
| HORVU5Hr1G022690.1 | Barley | nucleus | 61.2 | 39.72 |
| CDX86471 | Canola | nucleus | 50.27 | 39.66 |
| CDY44433 | Canola | nucleus | 50.27 | 39.66 |
| KRG97314 | Soybean | nucleus | 73.77 | 39.59 |
| TraesCS3D01G413700.1 | Wheat | nucleus | 62.84 | 39.25 |
| CDX91944 | Canola | nucleus | 44.26 | 39.13 |
| KXG39500 | Sorghum | nucleus | 71.04 | 38.69 |
| Zm00001d028930_P001 | Maize | nucleus | 71.04 | 38.69 |
| CDX74303 | Canola | nucleus | 43.72 | 38.46 |
| TraesCS3D01G014800.1 | Wheat | nucleus | 56.83 | 37.41 |
| TraesCS3B01G453300.1 | Wheat | nucleus | 62.3 | 37.13 |
| GSMUA_Achr7P05570_001 | Banana | nucleus | 55.19 | 37.13 |
| GSMUA_Achr11P... | Banana | nucleus | 68.85 | 36.63 |
| CDX96033 | Canola | nucleus | 56.83 | 36.62 |
| EES00624 | Sorghum | nucleus | 61.2 | 36.6 |
| KXG36991 | Sorghum | nucleus | 68.31 | 36.55 |
| TraesCS1D01G078600.1 | Wheat | nucleus | 64.48 | 36.53 |
| CDY01906 | Canola | nucleus | 56.83 | 36.49 |
| CDY69488 | Canola | nucleus | 55.19 | 36.46 |
| TraesCS1A01G076200.1 | Wheat | nucleus | 64.48 | 36.42 |
| TraesCS3A01G418100.1 | Wheat | nucleus | 61.2 | 36.36 |
| HORVU1Hr1G016420.1 | Barley | nucleus | 64.48 | 36.31 |
| Zm00001d040594_P001 | Maize | nucleus | 60.11 | 36.3 |
| TraesCS1B01G094500.1 | Wheat | nucleus | 64.48 | 36.2 |
| CDY69953 | Canola | nucleus | 55.74 | 36.17 |
| Zm00001d047579_P001 | Maize | nucleus | 68.85 | 36.1 |
| GSMUA_Achr3P08370_001 | Banana | nucleus | 55.74 | 35.54 |
| HORVU4Hr1G052490.5 | Barley | nucleus, plastid | 71.58 | 35.5 |
| CDY12705 | Canola | nucleus | 55.19 | 35.44 |
| Zm00001d007191_P001 | Maize | nucleus | 66.67 | 35.16 |
| CDY54094 | Canola | nucleus | 54.64 | 35.09 |
| HORVU3Hr1G092820.1 | Barley | nucleus | 62.84 | 34.74 |
| TraesCS2A01G097200.1 | Wheat | nucleus | 61.75 | 34.66 |
| CDY42115 | Canola | nucleus | 52.46 | 34.66 |
| TraesCS2D01G096000.1 | Wheat | nucleus | 61.2 | 34.15 |
| EES17207 | Sorghum | nucleus | 62.84 | 34.12 |
| TraesCS2B01G112600.1 | Wheat | nucleus | 61.75 | 34.04 |
| CDY03859 | Canola | nucleus | 53.01 | 33.8 |
| CDX84981 | Canola | nucleus | 52.46 | 33.33 |
| Zm00001d009066_P001 | Maize | nucleus | 57.38 | 33.02 |
| Zm00001d010933_P001 | Maize | nucleus | 66.12 | 32.97 |
| Zm00001d030644_P001 | Maize | nucleus | 62.84 | 32.76 |
| Zm00001d024726_P001 | Maize | nucleus | 63.39 | 32.68 |
| CDX74100 | Canola | nucleus | 60.11 | 32.64 |
| Zm00001d048647_P001 | Maize | nucleus | 62.3 | 32.39 |
| EES10257 | Sorghum | nucleus | 63.39 | 31.78 |
| HORVU2Hr1G016380.1 | Barley | nucleus | 60.11 | 30.3 |
| KXG21220 | Sorghum | nucleus | 67.21 | 30.3 |
| CDX77436 | Canola | nucleus | 42.62 | 30.0 |
| CDY61190 | Canola | nucleus | 42.62 | 29.89 |
| Zm00001d024725_P001 | Maize | nucleus | 66.12 | 29.8 |
| CDY70097 | Canola | nucleus | 38.25 | 29.66 |
| CDX71075 | Canola | nucleus | 38.25 | 29.05 |
| CDX80230 | Canola | nucleus | 37.16 | 28.69 |
| CDY49581 | Canola | nucleus | 37.16 | 28.69 |
| CDX94829 | Canola | nucleus | 42.62 | 28.57 |
| CDX93006 | Canola | nucleus | 42.62 | 28.47 |
| CDY64694 | Canola | nucleus | 42.62 | 28.47 |
| CDX88722 | Canola | nucleus | 37.16 | 28.1 |
| CDY49231 | Canola | nucleus | 40.98 | 27.99 |
| CDX73572 | Canola | nucleus | 37.16 | 27.76 |
| CDX78153 | Canola | nucleus | 37.16 | 27.76 |
| CDY45895 | Canola | nucleus | 38.8 | 27.63 |
| CDX86354 | Canola | nucleus | 40.44 | 27.61 |
| CDY13311 | Canola | nucleus | 36.61 | 27.46 |
| CDX67561 | Canola | nucleus | 35.52 | 27.08 |
| CDX85285 | Canola | nucleus | 39.89 | 27.04 |
| Os05t0132700-01 | Rice | nucleus | 31.69 | 26.98 |
| CDY00083 | Canola | nucleus | 38.8 | 26.3 |
| CDY19978 | Canola | nucleus | 38.25 | 26.22 |
| KXG21221 | Sorghum | nucleus | 67.21 | 25.79 |
| CDX86040 | Canola | nucleus | 36.61 | 24.1 |
| CDX86041 | Canola | nucleus | 36.61 | 24.1 |
| CDX99125 | Canola | nucleus | 36.61 | 24.1 |
| CDY35782 | Canola | nucleus | 21.86 | 19.51 |
| CDY58600 | Canola | nucleus | 30.05 | 17.03 |
| CDX86221 | Canola | nucleus | 6.01 | 15.71 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078D8J0 | EnsemblPlants:CDX85422 | ProteinID:CDX85422 | ProteinID:CDX85422.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00143109001 | InterPro:Homeobox-like_sf |
| InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF743 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EF3643 | SEG:seg | : |
Description
BnaC07g27330D
Coordinates
chrLK031841:-:1747583..1749380
Molecular Weight (calculated)
21837.9 Da
IEP (calculated)
10.361
GRAVY (calculated)
-0.973
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGKRSFEIN KNMGDFENNV DDEMDLRRGP WTVEEDFKLS NYISTLGEGR WNSLARCAGL KRTGKSCRLR WLNYLRPDVR RGNITLEEQL LILELHSRWG
101: NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA KQLRCDVNSQ QFKDTMRYLW MPRLVERIQA ASASSTTVRD HQQQQQLLNN RSF
101: NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA KQLRCDVNSQ QFKDTMRYLW MPRLVERIQA ASASSTTVRD HQQQQQLLNN RSF
001: MNISRTEFAN CKTLINHKEE VEEVEKKMEI EIRRGPWTVE EDMKLVSYIS LHGEGRWNSL SRSAGLNRTG KSCRLRWLNY LRPDIRRGDI SLQEQFIILE
101: LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD TIKHLWMPRL IERIAATQSV QFTSNHYSPE NSSVATATSS TSSSEAVRSS
201: FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW LIQ
101: LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD TIKHLWMPRL IERIAATQSV QFTSNHYSPE NSSVATATSS TSSSEAVRSS
201: FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW LIQ
Arabidopsis Description
MYB112MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q94CJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.