Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025300.1-P | Field mustard | nucleus | 99.57 | 99.57 |
| CDY44433 | Canola | nucleus | 99.57 | 99.57 |
| AT3G27810.1 | Thale cress | nucleus | 88.79 | 91.15 |
| CDY20036 | Canola | nucleus | 88.79 | 88.79 |
| KRG94092 | Soybean | nucleus | 32.76 | 85.39 |
| CDY00146 | Canola | nucleus | 58.19 | 81.33 |
| Solyc02g067760.2.1 | Tomato | nucleus | 58.62 | 69.74 |
| VIT_14s0066g01090.t01 | Wine grape | nucleus | 56.47 | 69.31 |
| KRH07188 | Soybean | nucleus | 61.21 | 68.27 |
| KRG94086 | Soybean | nucleus | 59.91 | 67.48 |
| KRH56587 | Soybean | nucleus | 59.05 | 66.5 |
| KRG93265 | Soybean | nucleus | 57.76 | 65.37 |
| PGSC0003DMT400001278 | Potato | nucleus | 56.47 | 63.28 |
| GSMUA_Achr1P27270_001 | Banana | nucleus | 47.84 | 56.63 |
| GSMUA_Achr6P27290_001 | Banana | nucleus | 46.98 | 55.9 |
| CDY58599 | Canola | nucleus | 25.43 | 55.66 |
| CDX85422 | Canola | nucleus | 39.66 | 50.27 |
| CDY37512 | Canola | nucleus | 43.1 | 49.75 |
| CDY49063 | Canola | nucleus | 43.1 | 48.31 |
| CDX91944 | Canola | nucleus | 42.67 | 47.83 |
| CDX74303 | Canola | nucleus | 42.24 | 47.12 |
| CDX86220 | Canola | nucleus | 38.79 | 46.63 |
| TraesCS1D01G415000.1 | Wheat | nucleus | 42.24 | 42.98 |
| HORVU3Hr1G056980.1 | Barley | nucleus | 37.5 | 41.04 |
| TraesCS1A01G406600.1 | Wheat | mitochondrion | 43.1 | 40.16 |
| TraesCS3A01G229500.1 | Wheat | nucleus | 36.21 | 40.0 |
| TraesCS3B01G258800.1 | Wheat | nucleus | 36.64 | 39.91 |
| TraesCS3D01G223700.1 | Wheat | nucleus | 36.64 | 39.72 |
| CDX95420 | Canola | nucleus | 38.79 | 38.79 |
| TraesCS1B01G436800.1 | Wheat | nucleus | 31.47 | 38.62 |
| Zm00001d044107_P001 | Maize | nucleus | 40.09 | 35.23 |
| CDY27504 | Canola | nucleus | 40.95 | 34.93 |
| CDY03859 | Canola | nucleus | 42.67 | 34.49 |
| HORVU1Hr1G089770.2 | Barley | nucleus | 43.53 | 34.47 |
| CDY42115 | Canola | nucleus | 40.95 | 34.3 |
| CDX84981 | Canola | nucleus | 42.24 | 34.03 |
| CDY69488 | Canola | nucleus | 40.09 | 33.57 |
| CDY69953 | Canola | nucleus | 40.09 | 32.98 |
| CDX96033 | Canola | nucleus | 40.09 | 32.75 |
| EES01143 | Sorghum | nucleus | 40.95 | 32.42 |
| CDY01906 | Canola | nucleus | 39.66 | 32.28 |
| CDY70097 | Canola | nucleus | 32.76 | 32.2 |
| CDY54094 | Canola | nucleus | 39.22 | 31.93 |
| CDY12705 | Canola | nucleus | 39.22 | 31.93 |
| Os01t0637800-00 | Rice | mitochondrion, nucleus, plastid | 37.93 | 31.65 |
| CDX77436 | Canola | nucleus | 35.34 | 31.54 |
| CDY49581 | Canola | nucleus | 31.9 | 31.22 |
| CDX80085 | Canola | nucleus | 26.72 | 31.16 |
| CDY61190 | Canola | nucleus | 34.91 | 31.03 |
| CDX88722 | Canola | nucleus | 32.33 | 30.99 |
| CDY05611 | Canola | nucleus | 42.24 | 30.82 |
| CDY33891 | Canola | nucleus | 42.24 | 30.82 |
| CDX80230 | Canola | nucleus | 31.47 | 30.8 |
| CDX71075 | Canola | nucleus | 31.9 | 30.71 |
| CDX99864 | Canola | nucleus | 41.81 | 30.31 |
| CDY34949 | Canola | nucleus | 41.81 | 30.31 |
| CDY49231 | Canola | nucleus | 34.48 | 29.85 |
| CDY24688 | Canola | nucleus | 40.95 | 29.78 |
| CDX94829 | Canola | nucleus | 34.91 | 29.67 |
| CDY64694 | Canola | nucleus | 34.91 | 29.56 |
| CDX93006 | Canola | nucleus | 34.91 | 29.56 |
| CDY05270 | Canola | nucleus | 40.95 | 29.5 |
| CDY00083 | Canola | nucleus | 31.47 | 27.04 |
| CDX99125 | Canola | nucleus | 32.33 | 26.98 |
| CDX86040 | Canola | nucleus | 32.33 | 26.98 |
| CDX86041 | Canola | nucleus | 32.33 | 26.98 |
| CDY19978 | Canola | nucleus | 31.03 | 26.97 |
| CDY45895 | Canola | nucleus | 29.74 | 26.85 |
| CDX85285 | Canola | nucleus | 31.03 | 26.67 |
| CDY70282 | Canola | nucleus | 33.62 | 26.53 |
| CDX86354 | Canola | nucleus | 30.6 | 26.49 |
| CDY13311 | Canola | nucleus | 27.59 | 26.23 |
| CDX78153 | Canola | nucleus | 27.59 | 26.12 |
| CDX73572 | Canola | nucleus | 27.59 | 26.12 |
| CDX67561 | Canola | nucleus | 26.72 | 25.83 |
| CDX74100 | Canola | nucleus | 31.47 | 21.66 |
| CDY35782 | Canola | nucleus | 17.67 | 20.0 |
| CDY58600 | Canola | nucleus | 23.71 | 17.03 |
| GSMUA_Achr9P07000_001 | Banana | nucleus | 46.55 | 8.59 |
| CDX86221 | Canola | nucleus | 2.59 | 8.57 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078DB22 | EnsemblPlants:CDX86471 | ProteinID:CDX86471 | ProteinID:CDX86471.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00144622001 | InterPro:Homeobox-like_sf |
| InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF531 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EEB50F | SEG:seg | : |
Description
BnaA06g31880D
Coordinates
chrLK031845:-:1729889..1732227
Molecular Weight (calculated)
25841.1 Da
IEP (calculated)
6.879
GRAVY (calculated)
-0.658
Length
232 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKRGGICSG GSGSSGETEV RKGPWTMEED LILINYIANH GDGVWNTLAK SAGLKRTGKS CRLRWLNYLR PDVRRGNITP EEQLIIMELH AKWGNRWSKI
101: AKHLPGRTDN EIKNFWRTRI QKYIKQTDVA ATATSSVGSQ SSEINDHAAS TSAHNVFCAQ DQAMDTYSPT TTSYQHTNME FNYGNYSAPV APVTTAATTA
201: DYPVPMTVDD QTGENYWGMD DIWSSMHLLN GN
101: AKHLPGRTDN EIKNFWRTRI QKYIKQTDVA ATATSSVGSQ SSEINDHAAS TSAHNVFCAQ DQAMDTYSPT TTSYQHTNME FNYGNYSAPV APVTTAATTA
201: DYPVPMTVDD QTGENYWGMD DIWSSMHLLN GN
001: MEKRGGGSSG GSGSSAEAEV RKGPWTMEED LILINYIANH GDGVWNSLAK SAGLKRTGKS CRLRWLNYLR PDVRRGNITP EEQLIIMELH AKWGNRWSKI
101: AKHLPGRTDN EIKNFWRTRI QKYIKQSDVT TTSSVGSHHS SEINDQAAST SSHNVFCTQD QAMETYSPTP TSYQHTNMEF NYGNYSAAAV TATVDYPVPM
201: TVDDQTGENY WGMDDIWSSM HLLNGN
101: AKHLPGRTDN EIKNFWRTRI QKYIKQSDVT TTSSVGSHHS SEINDQAAST SSHNVFCTQD QAMETYSPTP TSYQHTNMEF NYGNYSAAAV TATVDYPVPM
201: TVDDQTGENY WGMDDIWSSM HLLNGN
Arabidopsis Description
MYB21Transcription factor MYB21 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK95]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.