Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20036 | Canola | nucleus | 85.54 | 61.21 |
| CDY44433 | Canola | nucleus | 81.93 | 58.62 |
| CDX86471 | Canola | nucleus | 81.33 | 58.19 |
| GSMUA_Achr1P27270_001 | Banana | nucleus | 46.99 | 39.8 |
| CDX85422 | Canola | nucleus | 42.17 | 38.25 |
| GSMUA_Achr6P27290_001 | Banana | nucleus | 44.58 | 37.95 |
| CDY37512 | Canola | nucleus | 45.78 | 37.81 |
| CDY49063 | Canola | nucleus | 46.39 | 37.2 |
| CDX91944 | Canola | nucleus | 45.18 | 36.23 |
| CDX74303 | Canola | nucleus | 44.58 | 35.58 |
| CDX86220 | Canola | nucleus | 40.96 | 35.23 |
| CDY58599 | Canola | nucleus | 22.29 | 34.91 |
| TraesCS1D01G415000.1 | Wheat | nucleus | 43.98 | 32.02 |
| TraesCS1A01G406600.1 | Wheat | mitochondrion | 45.78 | 30.52 |
| HORVU3Hr1G056980.1 | Barley | nucleus | 37.35 | 29.25 |
| TraesCS3A01G229500.1 | Wheat | nucleus | 36.75 | 29.05 |
| TraesCS3D01G223700.1 | Wheat | nucleus | 37.35 | 28.97 |
| TraesCS3B01G258800.1 | Wheat | nucleus | 36.75 | 28.64 |
| CDX95420 | Canola | nucleus | 38.55 | 27.59 |
| CDY70097 | Canola | nucleus | 37.35 | 26.27 |
| CDY42115 | Canola | nucleus | 43.37 | 25.99 |
| CDY69488 | Canola | nucleus | 43.37 | 25.99 |
| CDY03859 | Canola | nucleus | 44.58 | 25.78 |
| CDX96033 | Canola | nucleus | 43.98 | 25.7 |
| CDY01906 | Canola | nucleus | 43.98 | 25.61 |
| CDY69953 | Canola | nucleus | 43.37 | 25.53 |
| Zm00001d044107_P001 | Maize | nucleus | 40.36 | 25.38 |
| CDY27504 | Canola | nucleus | 41.57 | 25.37 |
| CDX84981 | Canola | nucleus | 43.98 | 25.35 |
| CDY49581 | Canola | nucleus | 36.14 | 25.32 |
| HORVU1Hr1G089770.2 | Barley | nucleus | 44.58 | 25.26 |
| CDX77436 | Canola | nucleus | 39.16 | 25.0 |
| CDY61190 | Canola | nucleus | 39.16 | 24.9 |
| CDX71075 | Canola | nucleus | 36.14 | 24.9 |
| CDX80230 | Canola | nucleus | 35.54 | 24.89 |
| TraesCS1B01G436800.1 | Wheat | nucleus | 28.31 | 24.87 |
| CDX88722 | Canola | nucleus | 36.14 | 24.79 |
| CDY12705 | Canola | nucleus | 42.17 | 24.56 |
| CDY54094 | Canola | nucleus | 42.17 | 24.56 |
| CDY70282 | Canola | nucleus | 43.37 | 24.49 |
| CDY49231 | Canola | nucleus | 38.55 | 23.88 |
| CDY64694 | Canola | nucleus | 39.16 | 23.72 |
| EES01143 | Sorghum | nucleus | 41.57 | 23.55 |
| CDX94829 | Canola | nucleus | 38.55 | 23.44 |
| CDY34949 | Canola | nucleus | 45.18 | 23.44 |
| CDX99864 | Canola | nucleus | 45.18 | 23.44 |
| CDX93006 | Canola | nucleus | 38.55 | 23.36 |
| CDY33891 | Canola | nucleus | 44.58 | 23.27 |
| CDY05611 | Canola | nucleus | 44.58 | 23.27 |
| CDY24688 | Canola | nucleus | 44.58 | 23.2 |
| Os01t0637800-00 | Rice | mitochondrion, nucleus, plastid | 38.55 | 23.02 |
| CDY05270 | Canola | nucleus | 44.58 | 22.98 |
| CDY45895 | Canola | nucleus | 35.54 | 22.96 |
| CDX85285 | Canola | nucleus | 36.75 | 22.59 |
| CDX86354 | Canola | nucleus | 36.14 | 22.39 |
| CDY00083 | Canola | nucleus | 35.54 | 21.85 |
| CDY19978 | Canola | nucleus | 34.94 | 21.72 |
| CDY13311 | Canola | nucleus | 31.93 | 21.72 |
| CDX67561 | Canola | nucleus | 31.33 | 21.67 |
| CDX73572 | Canola | nucleus | 31.93 | 21.63 |
| CDX78153 | Canola | nucleus | 31.93 | 21.63 |
| CDX86040 | Canola | nucleus | 34.94 | 20.86 |
| CDX86041 | Canola | nucleus | 34.94 | 20.86 |
| CDX99125 | Canola | nucleus | 34.94 | 20.86 |
| CDX74100 | Canola | nucleus | 40.36 | 19.88 |
| CDY35782 | Canola | nucleus | 24.1 | 19.51 |
| CDX80085 | Canola | nucleus | 22.29 | 18.59 |
| CDY58600 | Canola | nucleus | 30.12 | 15.48 |
| CDX86221 | Canola | nucleus | 4.22 | 10.0 |
| GSMUA_Achr9P07000_001 | Banana | nucleus | 44.58 | 5.89 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078EGA1 | EnsemblPlants:CDY00146 | ProteinID:CDY00146 | ProteinID:CDY00146.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00109658001 | InterPro:Homeobox-like_sf |
| InterPro:IPR017877 | InterPro:IPR017930 | InterPro:Myb-like_dom | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS50090 |
| PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF531 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 |
| UniParc:UPI0004EDC2F6 | SEG:seg | : | : | : | : |
Description
BnaC09g01550D
Coordinates
chrLK031916:-:1033495..1035152
Molecular Weight (calculated)
19582.9 Da
IEP (calculated)
8.597
GRAVY (calculated)
-0.807
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MWICTYVRTY ESMFDSDDWV YKYIGLKRTG KSCRLRWLNY LRPDVRRGNI TPEEQLTIME LHAKWGNRWS KIAKHLPGRT DNEIKNFWRT RIQKYIKQTD
101: TYSPTTTSYQ HTNMDFNYGN YSAAAATATA TTTADYSIPM TVDDQTGENY WGMDDIWSSM HLLNGN
101: TYSPTTTSYQ HTNMDFNYGN YSAAAATATA TTTADYSIPM TVDDQTGENY WGMDDIWSSM HLLNGN
001: MYIGLKRTGK SCRLRWLNYL RPDVRRGNIT PEEQLIIMEL HAKWGNRWSK IAKHLPGRTD NEIKNFWRTR IQKYIKQSDV TTTSSVGSHH SSEINDQAAS
101: TSSHNVFCTQ DQAMETYSPT PTSYQHTNME FNYGNYSAAA VTATVDYPVP MTVDDQTGEN YWGMDDIWSS MHLLNGN
101: TSSHNVFCTQ DQAMETYSPT PTSYQHTNME FNYGNYSAAA VTATVDYPVP MTVDDQTGEN YWGMDDIWSS MHLLNGN
Arabidopsis Description
MYB21Transcription factor MYB21 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK95]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.