Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G223700.1 | Wheat | nucleus | 96.67 | 94.86 |
| TraesCS3B01G258800.1 | Wheat | nucleus | 93.33 | 92.02 |
| HORVU3Hr1G056980.1 | Barley | nucleus | 92.38 | 91.51 |
| KRG94092 | Soybean | nucleus | 26.67 | 62.92 |
| Solyc02g086690.2.1 | Tomato | nucleus | 26.67 | 59.57 |
| Os01t0637800-00 | Rice | mitochondrion, nucleus, plastid | 71.9 | 54.32 |
| Zm00001d044107_P001 | Maize | nucleus | 56.67 | 45.08 |
| Solyc02g067760.2.1 | Tomato | nucleus | 41.43 | 44.62 |
| VIT_14s0066g01090.t01 | Wine grape | nucleus | 40.0 | 44.44 |
| GSMUA_Achr1P27270_001 | Banana | nucleus | 40.95 | 43.88 |
| GSMUA_Achr6P27290_001 | Banana | nucleus | 39.52 | 42.56 |
| EES01143 | Sorghum | nucleus | 56.67 | 40.61 |
| KRG94086 | Soybean | nucleus | 39.52 | 40.29 |
| PGSC0003DMT400001278 | Potato | nucleus | 39.52 | 40.1 |
| KRH07188 | Soybean | nucleus | 39.52 | 39.9 |
| KRH56587 | Soybean | nucleus | 38.57 | 39.32 |
| KRG93265 | Soybean | nucleus | 38.1 | 39.02 |
| AT5G40350.1 | Thale cress | nucleus | 39.52 | 38.78 |
| AT3G01530.1 | Thale cress | nucleus | 37.62 | 38.35 |
| CDY37512 | Canola | nucleus | 36.67 | 38.31 |
| AT3G27810.1 | Thale cress | nucleus | 40.48 | 37.61 |
| CDX74303 | Canola | nucleus | 37.14 | 37.5 |
| Bra001005.1-P | Field mustard | nucleus | 37.14 | 37.5 |
| TraesCS1A01G406600.1 | Wheat | mitochondrion | 44.29 | 37.35 |
| CDX91944 | Canola | nucleus | 36.67 | 37.2 |
| Bra039108.1-P | Field mustard | nucleus | 36.19 | 37.07 |
| CDY20036 | Canola | nucleus | 40.95 | 37.07 |
| Bra039067.1-P | Field mustard | nucleus | 40.95 | 37.07 |
| CDY00146 | Canola | nucleus | 29.05 | 36.75 |
| CDY49063 | Canola | nucleus | 36.19 | 36.72 |
| CDY44433 | Canola | nucleus | 40.0 | 36.21 |
| Bra025300.1-P | Field mustard | nucleus | 40.0 | 36.21 |
| CDX86471 | Canola | nucleus | 40.0 | 36.21 |
| TraesCS4A01G173300.2 | Wheat | nucleus | 36.19 | 31.93 |
| TraesCS5A01G083100.1 | Wheat | nucleus | 34.76 | 30.8 |
| TraesCS5A01G087100.1 | Wheat | nucleus | 40.0 | 30.22 |
| TraesCS4A01G124900.1 | Wheat | nucleus | 43.81 | 28.84 |
| TraesCS1A01G076200.1 | Wheat | nucleus | 43.33 | 28.09 |
| TraesCS4A01G172200.1 | Wheat | nucleus | 38.57 | 28.03 |
| TraesCS5A01G512700.1 | Wheat | nucleus | 31.9 | 27.02 |
| TraesCS1A01G042700.1 | Wheat | nucleus | 33.33 | 26.62 |
| TraesCS3A01G535100.1 | Wheat | nucleus | 32.38 | 26.15 |
| TraesCS6A01G227700.1 | Wheat | nucleus | 32.86 | 25.18 |
| TraesCS2A01G363800.1 | Wheat | nucleus | 30.48 | 24.62 |
| TraesCS2A01G097200.1 | Wheat | nucleus | 38.1 | 24.54 |
| TraesCS3A01G418100.1 | Wheat | nucleus | 35.24 | 24.03 |
| TraesCS3A01G044700.1 | Wheat | nucleus | 39.52 | 23.99 |
| GSMUA_Achr9P07000_001 | Banana | nucleus | 47.14 | 7.88 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G229500.1 | EnsemblPlantsGene:TraesCS3A01G229500 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF531 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
| TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3A:-:429481621..429482380
Molecular Weight (calculated)
23551.5 Da
IEP (calculated)
7.323
GRAVY (calculated)
-0.647
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MARMMCGRAG EPAVRKGPWT LEEDLILVGY ISHHGEGSWD NLARSAGLNR NGKSCRLRWL NYLRPGLRRG SISPEEDMVI RELHSRLGNK WAEIAKHLPG
101: RTDNEVKNYW RTKVHKKAPG HQKQLPATSE ATSSVSASTS HASSTVGDEY TQTSFPYPDL SWVAADHHET VDVGASATRF FPSEFGGNFW NVQDNFWETL
201: PLSDPVYEAL
101: RTDNEVKNYW RTKVHKKAPG HQKQLPATSE ATSSVSASTS HASSTVGDEY TQTSFPYPDL SWVAADHHET VDVGASATRF FPSEFGGNFW NVQDNFWETL
201: PLSDPVYEAL
001: MNISRTEFAN CKTLINHKEE VEEVEKKMEI EIRRGPWTVE EDMKLVSYIS LHGEGRWNSL SRSAGLNRTG KSCRLRWLNY LRPDIRRGDI SLQEQFIILE
101: LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD TIKHLWMPRL IERIAATQSV QFTSNHYSPE NSSVATATSS TSSSEAVRSS
201: FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW LIQ
101: LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD TIKHLWMPRL IERIAATQSV QFTSNHYSPE NSSVATATSS TSSSEAVRSS
201: FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW LIQ
Arabidopsis Description
MYB112MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q94CJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.