Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG94092 | Soybean | nucleus | 36.45 | 87.64 |
| VIT_14s0066g01090.t01 | Wine grape | nucleus | 61.68 | 69.84 |
| Solyc02g067760.2.1 | Tomato | nucleus | 58.88 | 64.62 |
| KRH07188 | Soybean | nucleus | 62.62 | 64.42 |
| KRG94086 | Soybean | nucleus | 61.68 | 64.08 |
| KRH56587 | Soybean | nucleus | 59.81 | 62.14 |
| KRG93265 | Soybean | nucleus | 59.35 | 61.95 |
| AT3G27810.1 | Thale cress | nucleus | 64.95 | 61.5 |
| PGSC0003DMT400001278 | Potato | nucleus | 58.41 | 60.39 |
| GSMUA_Achr1P27270_001 | Banana | nucleus | 50.47 | 55.1 |
| GSMUA_Achr6P27290_001 | Banana | nucleus | 49.07 | 53.85 |
| AT3G01530.1 | Thale cress | nucleus | 49.07 | 50.97 |
| TraesCS1D01G415000.1 | Wheat | nucleus | 44.86 | 42.11 |
| TraesCS3A01G229500.1 | Wheat | nucleus | 38.78 | 39.52 |
| HORVU3Hr1G056980.1 | Barley | nucleus | 38.78 | 39.15 |
| TraesCS3D01G223700.1 | Wheat | nucleus | 38.78 | 38.78 |
| TraesCS1A01G406600.1 | Wheat | mitochondrion | 44.86 | 38.55 |
| TraesCS3B01G258800.1 | Wheat | nucleus | 37.85 | 38.03 |
| TraesCS1B01G436800.1 | Wheat | nucleus | 31.31 | 35.45 |
| AT1G48000.1 | Thale cress | nucleus | 39.25 | 34.57 |
| Zm00001d044107_P001 | Maize | nucleus | 42.06 | 34.09 |
| HORVU1Hr1G089770.2 | Barley | nucleus | 44.39 | 32.42 |
| AT2G47190.1 | Thale cress | nucleus | 40.65 | 31.87 |
| Os01t0637800-00 | Rice | mitochondrion, nucleus, plastid | 41.12 | 31.65 |
| AT1G68320.1 | Thale cress | nucleus | 42.06 | 31.47 |
| EES01143 | Sorghum | nucleus | 42.99 | 31.4 |
| AT3G24310.1 | Thale cress | nucleus | 38.78 | 30.86 |
| AT4G13480.1 | Thale cress | nucleus | 36.92 | 30.27 |
| AT3G53200.1 | Thale cress | nucleus | 33.64 | 30.25 |
| AT5G59780.3 | Thale cress | nucleus | 32.71 | 29.79 |
| AT5G49620.2 | Thale cress | nucleus | 44.39 | 29.59 |
| AT3G46130.1 | Thale cress | nucleus | 33.64 | 27.91 |
| AT1G25340.3 | Thale cress | nucleus | 39.72 | 27.6 |
| AT3G06490.1 | Thale cress | nucleus | 41.12 | 27.24 |
| AT3G30210.1 | Thale cress | nucleus | 33.18 | 25.72 |
| GSMUA_Achr9P07000_001 | Banana | nucleus | 47.66 | 8.11 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:834033 | ProteinID:AED94536.1 | EMBL:AF175987 | ArrayExpress:AT5G40350 |
| EnsemblPlantsGene:AT5G40350 | RefSeq:AT5G40350 | TAIR:AT5G40350 | RefSeq:AT5G40350-TAIR-G | EnsemblPlants:AT5G40350.1 | TAIR:AT5G40350.1 |
| EMBL:AY086615 | EMBL:AY519632 | Unigene:At.8437 | ProteinID:BAB11590.1 | GO:GO:0000003 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006357 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009740 | GO:GO:0009753 |
| GO:GO:0009791 | GO:GO:0009867 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | GO:GO:0048443 | GO:GO:0080086 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | Symbol:MYB24 |
| InterPro:Myb_dom | RefSeq:NP_198851.1 | PFAM:PF00249 | PO:PO:0000293 | PO:PO:0001185 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009052 | PO:PO:0009062 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51294 |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF531 | UniProt:Q9SPG9 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 |
| UniParc:UPI00000AA594 | SEG:seg | : | : | : | : |
Description
MYB24Transcription factor MYB24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SPG9]
Coordinates
chr5:-:16138544..16141134
Molecular Weight (calculated)
24460.6 Da
IEP (calculated)
7.233
GRAVY (calculated)
-0.829
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKRESSGGS GSGDAEVRKG PWTMEEDLIL INYIANHGEG VWNSLAKSAG LKRTGKSCRL RWLNYLRPDV RRGNITPEEQ LTIMELHAKW GNRWSKIAKH
101: LPGRTDNEIK NFWRTKIQKY IIKSGETTTV GSQSSEFINH HATTSHVMND TQETMDMYSP TTSYQHASNI NQQLNYGNYV PESGSIMMPL SVDQSEQNYW
201: SVDDLWPMNI YNGN
101: LPGRTDNEIK NFWRTKIQKY IIKSGETTTV GSQSSEFINH HATTSHVMND TQETMDMYSP TTSYQHASNI NQQLNYGNYV PESGSIMMPL SVDQSEQNYW
201: SVDDLWPMNI YNGN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.