Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX91944 | Canola | nucleus | 78.64 | 78.26 |
| CDY49063 | Canola | nucleus | 78.16 | 77.78 |
| CDX74303 | Canola | nucleus | 78.16 | 77.4 |
| Bra001005.1-P | Field mustard | nucleus | 78.16 | 77.4 |
| CDY37512 | Canola | nucleus | 75.24 | 77.11 |
| Bra039108.1-P | Field mustard | nucleus | 74.76 | 75.12 |
| GSMUA_Achr1P27270_001 | Banana | nucleus | 47.57 | 50.0 |
| AT5G40350.1 | Thale cress | nucleus | 50.97 | 49.07 |
| AT3G27810.1 | Thale cress | nucleus | 51.94 | 47.35 |
| GSMUA_Achr6P27290_001 | Banana | nucleus | 44.66 | 47.18 |
| TraesCS1D01G415000.1 | Wheat | nucleus | 46.12 | 41.67 |
| TraesCS1A01G406600.1 | Wheat | mitochondrion | 46.6 | 38.55 |
| TraesCS3A01G229500.1 | Wheat | nucleus | 38.35 | 37.62 |
| TraesCS3B01G258800.1 | Wheat | nucleus | 38.84 | 37.56 |
| HORVU3Hr1G056980.1 | Barley | nucleus | 38.35 | 37.26 |
| TraesCS3D01G223700.1 | Wheat | nucleus | 38.35 | 36.92 |
| TraesCS1B01G436800.1 | Wheat | nucleus | 32.52 | 35.45 |
| AT1G48000.1 | Thale cress | nucleus | 40.29 | 34.16 |
| HORVU1Hr1G089770.2 | Barley | nucleus | 46.12 | 32.42 |
| AT2G47190.1 | Thale cress | nucleus | 42.72 | 32.23 |
| AT1G68320.1 | Thale cress | nucleus | 44.66 | 32.17 |
| Os01t0637800-00 | Rice | mitochondrion, nucleus, plastid | 42.23 | 31.3 |
| Zm00001d044107_P001 | Maize | nucleus | 39.32 | 30.68 |
| AT5G49620.2 | Thale cress | nucleus | 47.09 | 30.22 |
| AT5G59780.3 | Thale cress | nucleus | 34.47 | 30.21 |
| AT4G13480.1 | Thale cress | nucleus | 36.41 | 28.74 |
| AT3G53200.1 | Thale cress | nucleus | 33.01 | 28.57 |
| EES01143 | Sorghum | nucleus | 40.29 | 28.33 |
| AT3G06490.1 | Thale cress | nucleus | 44.17 | 28.17 |
| AT3G46130.1 | Thale cress | nucleus | 34.95 | 27.91 |
| AT3G24310.1 | Thale cress | nucleus | 36.41 | 27.88 |
| AT1G25340.3 | Thale cress | nucleus | 38.84 | 25.97 |
| AT3G30210.1 | Thale cress | nucleus | 33.01 | 24.64 |
| GSMUA_Achr9P07000_001 | Banana | nucleus | 43.69 | 7.16 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:821113 | ProteinID:AAF01538.1 | ProteinID:AEE73682.1 | EMBL:AF062892 |
| EMBL:AK118091 | ArrayExpress:AT3G01530 | EnsemblPlantsGene:AT3G01530 | RefSeq:AT3G01530 | TAIR:AT3G01530 | RefSeq:AT3G01530-TAIR-G |
| EnsemblPlants:AT3G01530.1 | TAIR:AT3G01530.1 | Symbol:ATMYB57 | EMBL:AY519582 | Unigene:At.63553 | EMBL:BT005574 |
| GO:GO:0000003 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006357 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 |
| GO:GO:0009740 | GO:GO:0009791 | GO:GO:0009867 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0030154 |
| GO:GO:0043565 | GO:GO:0044212 | GO:GO:0048443 | GO:GO:0080086 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| InterPro:Myb_dom | RefSeq:NP_186802.1 | PFAM:PF00249 | PO:PO:0001185 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009009 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009052 | PO:PO:0009062 |
| PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF688 | UniProt:Q9SSA1 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000000C6B5 | SEG:seg | : |
Description
MYB57Transcription factor MYB57 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSA1]
Coordinates
chr3:-:210119..211804
Molecular Weight (calculated)
23718.1 Da
IEP (calculated)
10.060
GRAVY (calculated)
-0.833
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: METTMKKKGR VKATITSQKE EEGTVRKGPW TMEEDFILFN YILNHGEGLW NSVAKASGLK RTGKSCRLRW LNYLRPDVRR GNITEEEQLL IIQLHAKLGN
101: RWSKIAKHLP GRTDNEIKNF WRTKIQRHMK VSSENMMNHQ HHCSGNSQSS GMTTQGSSGK AIDTAESFSQ AKTTTFNVVE QQSNENYWNV EDLWPVHLLN
201: GDHHVI
101: RWSKIAKHLP GRTDNEIKNF WRTKIQRHMK VSSENMMNHQ HHCSGNSQSS GMTTQGSSGK AIDTAESFSQ AKTTTFNVVE QQSNENYWNV EDLWPVHLLN
201: GDHHVI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.