Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77436 | Canola | nucleus | 84.01 | 86.92 |
| Bra015029.1-P | Field mustard | nucleus | 87.36 | 86.72 |
| CDY49231 | Canola | nucleus | 85.87 | 86.19 |
| CDY61190 | Canola | nucleus | 82.53 | 85.06 |
| KRH62917 | Soybean | nucleus | 32.71 | 84.62 |
| CDX93006 | Canola | nucleus | 85.87 | 84.31 |
| Bra001941.1-P | Field mustard | nucleus | 85.87 | 84.31 |
| KRH55348 | Soybean | nucleus | 38.66 | 83.87 |
| CDY64694 | Canola | nucleus | 84.76 | 83.21 |
| Bra028369.1-P | Field mustard | nucleus | 84.76 | 83.21 |
| CDX94829 | Canola | nucleus | 84.39 | 83.15 |
| KRH11843 | Soybean | nucleus | 38.29 | 83.06 |
| KRH33348 | Soybean | nucleus | 30.86 | 81.37 |
| KRH75688 | Soybean | nucleus | 31.6 | 78.7 |
| AT4G13480.1 | Thale cress | nucleus | 62.83 | 64.75 |
| PGSC0003DMT400069955 | Potato | nucleus | 52.79 | 62.01 |
| KRG92245 | Soybean | nucleus | 57.25 | 60.63 |
| VIT_05s0049g02260.t01 | Wine grape | nucleus | 57.62 | 60.55 |
| KRH34553 | Soybean | nucleus | 59.48 | 60.15 |
| Solyc05g053150.1.1 | Tomato | nucleus | 50.93 | 59.83 |
| KRG90311 | Soybean | nucleus | 56.88 | 58.85 |
| KRH04452 | Soybean | nucleus | 57.62 | 58.49 |
| PGSC0003DMT400003796 | Potato | nucleus | 53.9 | 57.31 |
| Solyc09g090790.2.1 | Tomato | nucleus | 53.16 | 56.97 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 39.03 | 51.47 |
| GSMUA_Achr11P... | Banana | nucleus | 40.15 | 50.7 |
| GSMUA_Achr11P... | Banana | nucleus | 43.12 | 50.43 |
| KRH33568 | Soybean | nucleus | 58.36 | 49.06 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 41.26 | 48.05 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 42.75 | 47.33 |
| Zm00001d048383_P001 | Maize | nucleus | 38.66 | 44.83 |
| TraesCS2A01G363800.1 | Wheat | nucleus | 43.12 | 44.62 |
| Os03t0142600-00 | Rice | nucleus | 40.89 | 44.53 |
| HORVU0Hr1G005100.1 | Barley | nucleus | 37.17 | 44.44 |
| KXG26684 | Sorghum | nucleus | 46.47 | 44.33 |
| TraesCS2B01G381800.1 | Wheat | nucleus | 42.38 | 44.19 |
| HORVU2Hr1G087990.1 | Barley | nucleus | 42.38 | 44.02 |
| TraesCS2D01G361600.1 | Wheat | nucleus | 42.01 | 43.97 |
| HORVU6Hr1G057670.3 | Barley | nucleus | 43.87 | 43.7 |
| TraesCS4B01G344000.1 | Wheat | nucleus | 39.78 | 43.5 |
| Zm00001d017243_P001 | Maize | nucleus | 45.35 | 43.42 |
| Zm00001d027623_P001 | Maize | nucleus | 40.15 | 43.37 |
| TraesCS6A01G227700.1 | Wheat | nucleus | 43.87 | 43.07 |
| TraesCS4D01G339100.1 | Wheat | nucleus | 39.41 | 42.91 |
| Os02t0618400-02 | Rice | nucleus | 46.1 | 42.91 |
| TraesCS5A01G512700.1 | Wheat | nucleus | 39.41 | 42.74 |
| EER92876 | Sorghum | nucleus | 40.15 | 42.69 |
| EES07157 | Sorghum | nucleus | 45.35 | 42.36 |
| TraesCS6B01G254200.1 | Wheat | nucleus | 43.12 | 42.34 |
| TraesCS6D01G207300.1 | Wheat | nucleus | 43.12 | 42.18 |
| Zm00001d025823_P001 | Maize | nucleus | 43.49 | 42.09 |
| Os04t0508500-01 | Rice | nucleus | 43.12 | 41.28 |
| HORVU4Hr1G084360.3 | Barley | nucleus | 40.15 | 40.15 |
| AT5G40350.1 | Thale cress | nucleus | 30.86 | 38.78 |
| AT3G30210.1 | Thale cress | nucleus | 39.41 | 38.41 |
| AT3G01530.1 | Thale cress | nucleus | 27.88 | 36.41 |
| AT3G27810.1 | Thale cress | nucleus | 30.48 | 36.28 |
| Zm00001d051117_P001 | Maize | nucleus | 37.55 | 36.2 |
| AT5G59780.3 | Thale cress | nucleus | 30.11 | 34.47 |
| AT1G48000.1 | Thale cress | nucleus | 30.48 | 33.74 |
| AT3G53200.1 | Thale cress | nucleus | 28.62 | 32.35 |
| AT3G46130.1 | Thale cress | nucleus | 30.48 | 31.78 |
| AT2G47190.1 | Thale cress | nucleus | 31.23 | 30.77 |
| AT1G68320.1 | Thale cress | nucleus | 32.34 | 30.42 |
| AT3G06490.1 | Thale cress | nucleus | 33.83 | 28.17 |
| AT5G49620.2 | Thale cress | nucleus | 33.46 | 28.04 |
| AT1G25340.3 | Thale cress | nucleus | 31.23 | 27.27 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:822019 | UniProt:A0A178VHM5 | ProteinID:AEE76887.1 | ArrayExpress:AT3G24310 |
| EnsemblPlantsGene:AT3G24310 | RefSeq:AT3G24310 | TAIR:AT3G24310 | RefSeq:AT3G24310-TAIR-G | EnsemblPlants:AT3G24310.1 | TAIR:AT3G24310.1 |
| ProteinID:BAB02930.1 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| Symbol:MYB305 | InterPro:Myb_dom | RefSeq:NP_189074.1 | ProteinID:OAP04402.1 | PFAM:PF00249 | PO:PO:0009005 |
| PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF574 | UniProt:Q9LK14 | InterPro:SANT/Myb | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000009D13A | SEG:seg | : | : | : |
Description
MYB305MYB305 [Source:UniProtKB/TrEMBL;Acc:A0A178VHM5]
Coordinates
chr3:-:8811011..8812483
Molecular Weight (calculated)
30788.3 Da
IEP (calculated)
8.869
GRAVY (calculated)
-0.810
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLWGGMGGG WGMVEEGWRK GPWTAEEDRL LIDYVQLHGE GRWNSVARLA GLKRNGKSCR LRWVNYLRPD LKRGQITPHE ETIILELHAK WGNRWSTIAR
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNSAE KTKNRILKRQ QFQQQRQMEL QQEQQLLQFN QIDMKKIMSL LDDDNNNGDN TFSSSSSGES GALYVPHQIT
201: HSTTTSGCEP NSNGYYPVVP VTIPEANVNE DNAIWDGLWN LDFEGQGSFG GAACAPRKHY FQNMVIPFC
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNSAE KTKNRILKRQ QFQQQRQMEL QQEQQLLQFN QIDMKKIMSL LDDDNNNGDN TFSSSSSGES GALYVPHQIT
201: HSTTTSGCEP NSNGYYPVVP VTIPEANVNE DNAIWDGLWN LDFEGQGSFG GAACAPRKHY FQNMVIPFC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.