Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH62917 | Soybean | nucleus | 32.95 | 82.69 |
| KRH33348 | Soybean | nucleus | 31.03 | 79.41 |
| KRH55348 | Soybean | nucleus | 37.55 | 79.03 |
| KRH11843 | Soybean | nucleus | 37.16 | 78.23 |
| KRH75688 | Soybean | nucleus | 30.27 | 73.15 |
| AT3G24310.1 | Thale cress | nucleus | 64.75 | 62.83 |
| PGSC0003DMT400069955 | Potato | nucleus | 50.96 | 58.08 |
| KRG92245 | Soybean | nucleus | 55.56 | 57.09 |
| KRG90311 | Soybean | nucleus | 55.94 | 56.15 |
| Solyc05g053150.1.1 | Tomato | nucleus | 49.04 | 55.9 |
| KRH04452 | Soybean | nucleus | 56.7 | 55.85 |
| VIT_05s0049g02260.t01 | Wine grape | nucleus | 54.41 | 55.47 |
| KRH34553 | Soybean | nucleus | 55.56 | 54.51 |
| PGSC0003DMT400003796 | Potato | nucleus | 49.43 | 50.99 |
| Solyc09g090790.2.1 | Tomato | nucleus | 48.28 | 50.2 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 39.08 | 50.0 |
| GSMUA_Achr11P... | Banana | nucleus | 39.46 | 48.36 |
| KRH33568 | Soybean | nucleus | 57.47 | 46.88 |
| GSMUA_Achr11P... | Banana | nucleus | 40.61 | 46.09 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 40.23 | 45.45 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 41.76 | 44.86 |
| Os03t0142600-00 | Rice | nucleus | 41.38 | 43.72 |
| Zm00001d048383_P001 | Maize | nucleus | 38.7 | 43.53 |
| HORVU0Hr1G005100.1 | Barley | nucleus | 37.16 | 43.11 |
| TraesCS4B01G344000.1 | Wheat | nucleus | 39.46 | 41.87 |
| Zm00001d027623_P001 | Maize | nucleus | 39.85 | 41.77 |
| EER92876 | Sorghum | nucleus | 40.23 | 41.5 |
| Zm00001d025823_P001 | Maize | nucleus | 44.06 | 41.37 |
| TraesCS4D01G339100.1 | Wheat | nucleus | 39.08 | 41.3 |
| TraesCS2A01G363800.1 | Wheat | nucleus | 41.0 | 41.15 |
| TraesCS2B01G381800.1 | Wheat | nucleus | 40.61 | 41.09 |
| HORVU2Hr1G087990.1 | Barley | nucleus | 40.61 | 40.93 |
| TraesCS2D01G361600.1 | Wheat | nucleus | 40.23 | 40.86 |
| HORVU6Hr1G057670.3 | Barley | nucleus | 42.15 | 40.74 |
| TraesCS5A01G512700.1 | Wheat | nucleus | 38.7 | 40.73 |
| KXG26684 | Sorghum | nucleus | 43.68 | 40.43 |
| Zm00001d017243_P001 | Maize | nucleus | 43.3 | 40.21 |
| TraesCS6A01G227700.1 | Wheat | nucleus | 42.15 | 40.15 |
| TraesCS6D01G207300.1 | Wheat | nucleus | 42.15 | 40.0 |
| TraesCS6B01G254200.1 | Wheat | nucleus | 41.76 | 39.78 |
| HORVU4Hr1G084360.3 | Barley | nucleus | 40.61 | 39.41 |
| Os02t0618400-02 | Rice | nucleus | 43.3 | 39.1 |
| EES07157 | Sorghum | nucleus | 42.91 | 38.89 |
| Os04t0508500-01 | Rice | nucleus | 41.0 | 38.08 |
| AT3G30210.1 | Thale cress | nucleus | 39.08 | 36.96 |
| AT5G40350.1 | Thale cress | nucleus | 30.27 | 36.92 |
| AT3G27810.1 | Thale cress | nucleus | 31.8 | 36.73 |
| AT3G01530.1 | Thale cress | nucleus | 28.74 | 36.41 |
| AT5G59780.3 | Thale cress | nucleus | 31.42 | 34.89 |
| AT1G48000.1 | Thale cress | nucleus | 31.8 | 34.16 |
| Zm00001d051117_P001 | Maize | nucleus | 35.25 | 32.97 |
| AT3G46130.1 | Thale cress | nucleus | 31.8 | 32.17 |
| AT3G53200.1 | Thale cress | nucleus | 27.97 | 30.67 |
| AT1G68320.1 | Thale cress | nucleus | 33.33 | 30.42 |
| AT2G47190.1 | Thale cress | nucleus | 29.5 | 28.21 |
| AT1G25340.3 | Thale cress | nucleus | 32.95 | 27.92 |
| AT5G49620.2 | Thale cress | nucleus | 33.33 | 27.1 |
| AT3G06490.1 | Thale cress | nucleus | 32.18 | 26.01 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:826980 | ProteinID:AEE83284.1 | ArrayExpress:AT4G13480 | EnsemblPlantsGene:AT4G13480 |
| RefSeq:AT4G13480 | TAIR:AT4G13480 | RefSeq:AT4G13480-TAIR-G | EnsemblPlants:AT4G13480.1 | TAIR:AT4G13480.1 | EMBL:AY133705 |
| Symbol:AtMYB79 | ProteinID:CAB41106.1 | ProteinID:CAB78390.1 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf |
| InterPro:IPR017930 | InterPro:Myb_dom | RefSeq:NP_193084.1 | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF574 | UniProt:Q9T0G9 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00000A3E2E |
| SEG:seg | : | : | : | : | : |
Description
AtMYB79Myb domain protein 79 [Source:UniProtKB/TrEMBL;Acc:Q9T0G9]
Coordinates
chr4:+:7836644..7837763
Molecular Weight (calculated)
30142.6 Da
IEP (calculated)
9.511
GRAVY (calculated)
-0.785
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEEVWRKGP WTAEEDRLLI EYVRVHGEGR WNSVSKLAGL KRNGKSCRLR WVNYLRPDLK RGQITPHEES IILELHAKWG NRWSTIARSL PGRTDNEIKN
101: YWRTHFKKKA KPTTNNAEKI KSRLLKRQHF KEQREIELQQ EQQLFQFDQL GMKKIISLLE ENNSSSSSDG GGDVFYYPDQ ITHSSKPFGY NSNSLEEQLQ
201: GRFSPVNIPD ANTMNEDNAI WDGFWNMDVV NGHGGNLGVV AATAACGPRK PYFHNLVIPF C
101: YWRTHFKKKA KPTTNNAEKI KSRLLKRQHF KEQREIELQQ EQQLFQFDQL GMKKIISLLE ENNSSSSSDG GGDVFYYPDQ ITHSSKPFGY NSNSLEEQLQ
201: GRFSPVNIPD ANTMNEDNAI WDGFWNMDVV NGHGGNLGVV AATAACGPRK PYFHNLVIPF C
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.