Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G207300.1 | Wheat | nucleus | 95.26 | 94.91 |
| TraesCS6B01G254200.1 | Wheat | nucleus | 92.34 | 92.34 |
| HORVU6Hr1G057670.3 | Barley | nucleus | 90.88 | 92.22 |
| KRH62917 | Soybean | nucleus | 28.47 | 75.0 |
| KRH33348 | Soybean | nucleus | 27.74 | 74.51 |
| KRH55348 | Soybean | nucleus | 32.85 | 72.58 |
| KRH11843 | Soybean | nucleus | 32.48 | 71.77 |
| KRH75688 | Soybean | nucleus | 26.64 | 67.59 |
| EES07157 | Sorghum | nucleus | 70.44 | 67.01 |
| Zm00001d017243_P001 | Maize | nucleus | 67.52 | 65.84 |
| Os02t0618400-02 | Rice | nucleus | 67.52 | 64.01 |
| GSMUA_Achr11P... | Banana | nucleus | 47.08 | 60.56 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 48.91 | 58.01 |
| TraesCS2A01G363800.1 | Wheat | nucleus | 54.38 | 57.31 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 50.0 | 56.38 |
| Zm00001d051117_P001 | Maize | nucleus | 57.3 | 56.27 |
| GSMUA_Achr11P... | Banana | nucleus | 46.35 | 55.22 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 40.88 | 54.9 |
| PGSC0003DMT400069955 | Potato | nucleus | 41.61 | 49.78 |
| VIT_05s0049g02260.t01 | Wine grape | nucleus | 45.62 | 48.83 |
| Solyc05g053150.1.1 | Tomato | nucleus | 40.15 | 48.03 |
| KRG92245 | Soybean | nucleus | 43.43 | 46.85 |
| Solyc09g090790.2.1 | Tomato | nucleus | 42.7 | 46.61 |
| CDX77436 | Canola | nucleus | 43.8 | 46.15 |
| PGSC0003DMT400003796 | Potato | nucleus | 42.34 | 45.85 |
| KRG90311 | Soybean | nucleus | 43.43 | 45.77 |
| KRH04452 | Soybean | nucleus | 43.8 | 45.28 |
| CDY61190 | Canola | nucleus | 42.7 | 44.83 |
| CDY49231 | Canola | nucleus | 43.8 | 44.78 |
| Bra015029.1-P | Field mustard | nucleus | 44.16 | 44.65 |
| CDX93006 | Canola | nucleus | 44.16 | 44.16 |
| Bra001941.1-P | Field mustard | nucleus | 44.16 | 44.16 |
| KRH34553 | Soybean | nucleus | 42.7 | 43.98 |
| AT3G24310.1 | Thale cress | nucleus | 43.07 | 43.87 |
| VIT_14s0083g01060.t01 | Wine grape | nucleus | 39.42 | 43.72 |
| TraesCS5A01G512700.1 | Wheat | nucleus | 39.42 | 43.55 |
| Solyc02g089190.1.1 | Tomato | nucleus | 37.96 | 43.51 |
| CDX94829 | Canola | nucleus | 43.07 | 43.22 |
| CDY64694 | Canola | nucleus | 42.7 | 42.7 |
| Bra028369.1-P | Field mustard | nucleus | 42.7 | 42.7 |
| PGSC0003DMT400003479 | Potato | nucleus | 36.86 | 42.44 |
| AT4G13480.1 | Thale cress | nucleus | 40.15 | 42.15 |
| CDX85285 | Canola | nucleus | 39.42 | 40.0 |
| CDX86354 | Canola | nucleus | 39.05 | 39.93 |
| Bra025410.1-P | Field mustard | nucleus | 39.05 | 39.93 |
| Bra036202.1-P | Field mustard | nucleus | 38.69 | 39.7 |
| CDY19978 | Canola | nucleus | 38.69 | 39.7 |
| Bra020744.1-P | Field mustard | nucleus | 37.23 | 39.69 |
| CDY45895 | Canola | nucleus | 37.23 | 39.69 |
| CDY00083 | Canola | nucleus | 39.05 | 39.63 |
| KRH01379 | Soybean | nucleus | 36.86 | 39.15 |
| AT3G30210.1 | Thale cress | nucleus | 38.32 | 38.04 |
| KRH33568 | Soybean | nucleus | 44.16 | 37.81 |
| KRH45095 | Soybean | nucleus | 35.77 | 35.64 |
| KRH01378 | Soybean | nucleus | 35.77 | 35.13 |
| TraesCS4A01G173300.2 | Wheat | nucleus | 29.2 | 33.61 |
| TraesCS5A01G083100.1 | Wheat | nucleus | 28.83 | 33.33 |
| TraesCS3A01G229500.1 | Wheat | nucleus | 25.18 | 32.86 |
| CDY35782 | Canola | nucleus | 23.72 | 31.71 |
| TraesCS3A01G535100.1 | Wheat | nucleus | 28.83 | 30.38 |
| TraesCS1A01G406600.1 | Wheat | mitochondrion | 27.01 | 29.72 |
| TraesCS5A01G087100.1 | Wheat | nucleus | 29.93 | 29.5 |
| TraesCS1A01G042700.1 | Wheat | nucleus | 27.01 | 28.14 |
| TraesCS4A01G172200.1 | Wheat | nucleus | 29.2 | 27.68 |
| TraesCS3A01G418100.1 | Wheat | nucleus | 30.29 | 26.95 |
| TraesCS4A01G124900.1 | Wheat | nucleus | 31.02 | 26.65 |
| TraesCS1A01G076200.1 | Wheat | nucleus | 31.02 | 26.23 |
| TraesCS3A01G044700.1 | Wheat | nucleus | 30.66 | 24.28 |
| TraesCS2A01G097200.1 | Wheat | nucleus | 28.83 | 24.23 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G227700.1 | EnsemblPlantsGene:TraesCS6A01G227700 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF574 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
| TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr6A:+:428426012..428427049
Molecular Weight (calculated)
30564.3 Da
IEP (calculated)
5.592
GRAVY (calculated)
-0.824
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQYGWGREE GGWRKGPWTA QEDKLLLGYV RQQGDGRWNS VAKLTGLKRS GKSCRLRWVN YLRPDLKRGK ITPQEETVIL ELHALWGNRW STIARSLPGR
101: TDNEIKNYWR THFKKGKPSS KNIERARARF LKQRREIMQG HHEHQRDVQD DDGAASADNN GDGAASHHAD EATTWPAPPP AQDDDDLAMM RDMADMDDFL
201: QYHDPMSTSA YFLLNGGDGA ASDAGSSGEI DACGATWGSL WNLDDLDVVD DVGGGGACGW GSFALLQDHG LAFY
101: TDNEIKNYWR THFKKGKPSS KNIERARARF LKQRREIMQG HHEHQRDVQD DDGAASADNN GDGAASHHAD EATTWPAPPP AQDDDDLAMM RDMADMDDFL
201: QYHDPMSTSA YFLLNGGDGA ASDAGSSGEI DACGATWGSL WNLDDLDVVD DVGGGGACGW GSFALLQDHG LAFY
001: MVEEVWRKGP WTAEEDRLLI EYVRVHGEGR WNSVSKLAGL KRNGKSCRLR WVNYLRPDLK RGQITPHEES IILELHAKWG NRWSTIARSL PGRTDNEIKN
101: YWRTHFKKKA KPTTNNAEKI KSRLLKRQHF KEQREIELQQ EQQLFQFDQL GMKKIISLLE ENNSSSSSDG GGDVFYYPDQ ITHSSKPFGY NSNSLEEQLQ
201: GRFSPVNIPD ANTMNEDNAI WDGFWNMDVV NGHGGNLGVV AATAACGPRK PYFHNLVIPF C
101: YWRTHFKKKA KPTTNNAEKI KSRLLKRQHF KEQREIELQQ EQQLFQFDQL GMKKIISLLE ENNSSSSSDG GGDVFYYPDQ ITHSSKPFGY NSNSLEEQLQ
201: GRFSPVNIPD ANTMNEDNAI WDGFWNMDVV NGHGGNLGVV AATAACGPRK PYFHNLVIPF C
Arabidopsis Description
AtMYB79Myb domain protein 79 [Source:UniProtKB/TrEMBL;Acc:Q9T0G9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.