Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G453300.1 | Wheat | nucleus | 92.21 | 92.51 |
| TraesCS3D01G413700.1 | Wheat | nucleus | 86.69 | 91.13 |
| HORVU3Hr1G092820.1 | Barley | nucleus | 84.74 | 78.85 |
| Os01t0298400-01 | Rice | extracellular, nucleus | 63.96 | 67.24 |
| CDX85422 | Canola | nucleus | 36.36 | 61.2 |
| CDX86220 | Canola | nucleus | 36.36 | 58.03 |
| EES00624 | Sorghum | nucleus | 54.87 | 55.23 |
| Zm00001d040594_P001 | Maize | nucleus | 53.57 | 54.46 |
| Zm00001d009066_P001 | Maize | nucleus | 54.87 | 53.14 |
| PGSC0003DMT400011750 | Potato | nucleus | 37.01 | 49.57 |
| PGSC0003DMT400011745 | Potato | nucleus | 37.34 | 49.15 |
| Solyc12g099130.1.1 | Tomato | nucleus | 36.69 | 48.09 |
| Solyc12g099120.1.1 | Tomato | nucleus | 37.34 | 46.56 |
| AT1G48000.1 | Thale cress | nucleus | 36.04 | 45.68 |
| Solyc01g057910.2.1 | Tomato | nucleus | 42.21 | 45.3 |
| TraesCS4A01G172200.1 | Wheat | nucleus | 42.21 | 44.98 |
| VIT_05s0077g00500.t01 | Wine grape | nucleus | 44.48 | 44.77 |
| PGSC0003DMT400022600 | Potato | nucleus | 42.21 | 43.77 |
| TraesCS4A01G124900.1 | Wheat | nucleus | 44.16 | 42.63 |
| TraesCS1A01G076200.1 | Wheat | nucleus | 44.16 | 41.98 |
| CDY05611 | Canola | nucleus | 42.86 | 41.51 |
| CDY33891 | Canola | nucleus | 42.86 | 41.51 |
| Bra020624.1-P | Field mustard | nucleus | 42.86 | 41.51 |
| Bra001202.1-P | Field mustard | nucleus | 40.91 | 41.45 |
| TraesCS5A01G087100.1 | Wheat | nucleus | 37.01 | 41.01 |
| CDY24688 | Canola | nucleus | 41.88 | 40.44 |
| KRH02414 | Soybean | nucleus | 42.21 | 40.37 |
| CDY05270 | Canola | nucleus | 41.56 | 39.75 |
| KRH50671 | Soybean | nucleus | 41.88 | 39.69 |
| AT3G06490.1 | Thale cress | nucleus | 41.56 | 39.63 |
| Solyc05g053330.2.1 | Tomato | nucleus | 40.91 | 39.62 |
| Bra029582.1-P | Field mustard | nucleus | 41.23 | 39.44 |
| Bra010021.1-P | Field mustard | nucleus | 41.23 | 39.32 |
| Bra010022.1-P | Field mustard | nucleus | 41.23 | 39.32 |
| Bra040274.1-P | Field mustard | nucleus | 40.58 | 39.06 |
| CDX99864 | Canola | nucleus | 40.58 | 39.06 |
| CDY34949 | Canola | nucleus | 40.58 | 39.06 |
| AT5G49620.2 | Thale cress | nucleus | 40.58 | 38.94 |
| PGSC0003DMT400011748 | Potato | nucleus | 37.01 | 38.64 |
| PGSC0003DMT400069841 | Potato | nucleus | 40.58 | 38.58 |
| Solyc12g099140.1.1 | Tomato | nucleus | 36.69 | 37.67 |
| TraesCS2A01G097200.1 | Wheat | nucleus | 39.29 | 37.12 |
| KRH36928 | Soybean | nucleus | 40.58 | 36.76 |
| KRG97314 | Soybean | nucleus | 40.58 | 36.66 |
| CDY70282 | Canola | nucleus | 33.77 | 35.37 |
| TraesCS1A01G406600.1 | Wheat | mitochondrion | 28.57 | 35.34 |
| TraesCS3A01G229500.1 | Wheat | nucleus | 24.03 | 35.24 |
| GSMUA_Achr11P... | Banana | nucleus | 39.29 | 35.17 |
| TraesCS2A01G363800.1 | Wheat | nucleus | 27.6 | 32.69 |
| TraesCS5A01G083100.1 | Wheat | nucleus | 25.0 | 32.49 |
| TraesCS3A01G535100.1 | Wheat | nucleus | 26.62 | 31.54 |
| TraesCS4A01G173300.2 | Wheat | nucleus | 24.35 | 31.51 |
| TraesCS3A01G044700.1 | Wheat | nucleus | 35.39 | 31.5 |
| TraesCS5A01G512700.1 | Wheat | nucleus | 24.68 | 30.65 |
| TraesCS6A01G227700.1 | Wheat | nucleus | 26.95 | 30.29 |
| CDX74100 | Canola | nucleus | 32.47 | 29.67 |
| TraesCS1A01G042700.1 | Wheat | nucleus | 24.03 | 28.14 |
| CDY58600 | Canola | nucleus | 20.78 | 19.81 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G418100.1 | EnsemblPlantsGene:TraesCS3A01G418100 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF659 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
| TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3A:+:660195842..660196768
Molecular Weight (calculated)
33925.6 Da
IEP (calculated)
6.835
GRAVY (calculated)
-0.531
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHFDSFGST GMDAVWTGPC GWPAAAATTG GGQEATDLRR GPWTMEEDAL LAGHIAKHGE GRWNELASAA GLRRTGKSCR LRWLNYLRPD VRRGDFTPQE
101: QLLILELHFR WGKRWSRIAR EMPGRTDNEI KNYWRTRVQK HAKQLKCDVD SRQFRDVMRH LWMPRLLERI QAAAAATPAP SLEHAASPVH PLSVAPACRG
201: GIGMCHSPET TTVTTSSTAG SSVSLEVHFP SNQLVLTAGS TTNWSGSGSD QCGSASARSD DMLDGSWSEL LARACDDGAD SVVFPHFELG GSGDDKWSLE
301: DIWSQHHY
101: QLLILELHFR WGKRWSRIAR EMPGRTDNEI KNYWRTRVQK HAKQLKCDVD SRQFRDVMRH LWMPRLLERI QAAAAATPAP SLEHAASPVH PLSVAPACRG
201: GIGMCHSPET TTVTTSSTAG SSVSLEVHFP SNQLVLTAGS TTNWSGSGSD QCGSASARSD DMLDGSWSEL LARACDDGAD SVVFPHFELG GSGDDKWSLE
301: DIWSQHHY
001: MNISRTEFAN CKTLINHKEE VEEVEKKMEI EIRRGPWTVE EDMKLVSYIS LHGEGRWNSL SRSAGLNRTG KSCRLRWLNY LRPDIRRGDI SLQEQFIILE
101: LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD TIKHLWMPRL IERIAATQSV QFTSNHYSPE NSSVATATSS TSSSEAVRSS
201: FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW LIQ
101: LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD TIKHLWMPRL IERIAATQSV QFTSNHYSPE NSSVATATSS TSSSEAVRSS
201: FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW LIQ
Arabidopsis Description
MYB112MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q94CJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.